CN189596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189596 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.277e-24 Identity = 57/144 (39.58%), Postives = 86/144 (59.72%), Query Frame = 2 Query: 44 ESYDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGV-DSDDLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKA 472 E+YDRA E+K FDE T +PR F +P +A+ +P S ++PTIDL GV +S +R ++V K+ A + GFFQ +NHG+ ++V+E+M+ I+ FH+Q PE++ Y R+ TK + Y SN DL+ S A Sbjct: 3 ENYDRASELKAFDEMKIGVKGLVDAGVTKVPRIFHNPHVNVANPKPTSTVV----MIPTIDLGGVFESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNADLYESPA 142
BLAST of CN189596 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 9.153e-23 Identity = 60/150 (40.00%), Postives = 86/150 (57.33%), Query Frame = 2 Query: 26 ATIMSLESYDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDL-RPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKA 472 +++ + + DR+ +K FDE+ T IP F PPATL +P S + +PTIDL G +D + R ++VEKI A+ + GFFQV+NHGI ++VLE+M+ I+ FHEQ E+K Y R+ + Y SN DLF S A Sbjct: 3 SSLPQVAALDRSTLLKAFDETKTGVKGLIDAGITEIPSIFRAPPATLTSPKPPSSS---DFSIPTIDLKGGGTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPA 149
BLAST of CN189596 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.663e-22 Identity = 54/143 (37.76%), Postives = 80/143 (55.94%), Query Frame = 2 Query: 50 YDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDL--RPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKA 472 +DRA E+K FDE+ + +PR F HP L+ +P +PTIDL G D D R +E+I A+ + GFFQV+NHG+ +E+LE+M + ++ FHEQ E++ Y R+ ++ Y+SN DLF S A Sbjct: 10 FDRASELKAFDETKTGVKGLVDSGVSQVPRIFHHPTVKLSTPKPLPSDLLHLKTIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPA 152
BLAST of CN189596 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 3.478e-22 Identity = 55/144 (38.19%), Postives = 80/144 (55.56%), Query Frame = 2 Query: 47 SYDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDL--RPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKA 472 S+DRA E+K FDE+ + IPR F H LA+ +P +PTIDL G D D +E I A+ + GFFQV+NHG+ +E+LE+M ++ FHEQPPE++ +Y R+ + Y+SN DL+ + A Sbjct: 9 SFDRASELKAFDETKTGVKGLVDSGISKIPRIFHHSSVELANPKPLPSDLLHLKTIPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFIYLSNFDLYTAAA 152
BLAST of CN189596 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.254e-21 Identity = 55/142 (38.73%), Postives = 79/142 (55.63%), Query Frame = 2 Query: 44 ESYDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDLR-PTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHS 466 ESYD+ E+K FD++ T +P+ F+ PP + ++K V P IDL G+D D ++ IV+K+ AS + GFFQVVNHGI VL+R ++ + F EQ E+K Y R+ K V Y SN+DL+ S Sbjct: 8 ESYDKMSELKAFDDTKAGVKGLVDSGITKVPQIFVLPP------KDRAKKCETHFVFPVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKS 143
BLAST of CN189596 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.512e-17 Identity = 55/140 (39.29%), Postives = 79/140 (56.43%), Query Frame = 2 Query: 38 SLESYDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDV-VPTIDLSGVDSD-DLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRREN-TKGVSYISN 448 +L + +E+K FDE+ T IPR FI P L + S R SD+ +P I+L+G+ S+ ++R IVEKI AS + GFFQ+VNHGI +V+++MV ++ FHEQ +IK Y R+ K Y SN Sbjct: 35 TLSEEESLRELKAFDETKAGVKGIVDTGITKIPRIFIDQPKNLDRI---SVCRGKSDIKIPVINLNGLSSNSEIRREIVEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSRDRFNKNFLYSSN 171 The following BLAST results are available for this feature:
BLAST of CN189596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189596 ID=CN189596; Name=CN189596; organism=Citrus sinensis; type=EST; length=474bpback to top |