CN189515

Overview
NameCN189515
Unique NameCN189515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7903 contig Csv1_Contig7903:26..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_ARATH (Eukaryotic translation initiation factor 3 subunit I OS=Arabidopsis thaliana GN=TIF3I1 PE=2 SV=2)

HSP 1 Score: 328.561 bits (841), Expect = 1.965e-89
Identity = 154/199 (77.39%), Postives = 176/199 (88.44%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQG--RINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSL 686
            MRPILMKGHERPLT+L+YN +GDLLFSCAKDHTPT+WFADNGERLGTYRGHNGAVWCCDVSRDS  LITGSADQTAKLW+V++G +LFTF F++P RSVDFAVGD+LAVITTD F++  +AIHVKRIA DP +Q  ESVL+L  P G  RINRAVWGPLN+TI+S GED ++RIWD ETGKLLK+SD+E GHKK ITSL
Sbjct:    1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSL 199          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_CULQU (Eukaryotic translation initiation factor 3 subunit I OS=Culex quinquefasciatus GN=CPIJ018275 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.526e-41
Identity = 83/193 (43.01%), Postives = 120/193 (62.18%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLIL----KGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETG 662
            M+P++++GHER +T +KYN +GDL+FS AKDH P+VWF+ NGERLGTY GH GAVWC DV   +  LITG+ D + KLW+VETG+ L T   +S AR+ +F+     A  +TD  M  NS + +  +    +  S +S ++     +  Q +I   +WG L+ T+I+  E+  +RIWD  T K L   +  TG
Sbjct:    1 MKPLMLQGHERAITQIKYNREGDLIFSTAKDHKPSVWFSLNGERLGTYNGHQGAVWCVDVDWTTTRLITGAGDMSTKLWDVETGSVLGTIPCNSAARTANFSFSGNQASYSTDKAMGHNSELFIIDVRNVDSSISSQSPVLKLTMNQSIQTKITSMLWGALDETVITGHENGSIRIWDLRTAKELNSVNDHTG 193          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_AEDAE (Eukaryotic translation initiation factor 3 subunit I OS=Aedes aegypti GN=AAEL013144 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.291e-40
Identity = 81/190 (42.63%), Postives = 117/190 (61.58%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGES--VLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKET 659
            M+P++++GHER +T +KYN +GDL+FS AKDH P+VWF+ NGERLGT+ GH GAVWC DV   +  LITGS D + KLW+VETG+ L T   +S AR+V+F+     A  +TD  M  N  + +  +    +  S +S  + +    Q +I   +WG L+ T+I+  E+  +RIWD    K L   +  T
Sbjct:    1 MKPLMLQGHERAITQIKYNREGDLIFSTAKDHKPSVWFSLNGERLGTFNGHQGAVWCVDVDWTTTRLITGSGDMSTKLWDVETGSVLGTIPCNSAARTVNFSYSGNQASYSTDKAMGHNCELFIIDVRNVDSSISNQSPVLKLTMNQQSKITSMLWGALDETVITGHENGSIRIWDLRAAKELNSVNDHT 190          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_SCHPO (Eukaryotic translation initiation factor 3 subunit I OS=Schizosaccharomyces pombe GN=tif34 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.371e-40
Identity = 81/198 (40.91%), Postives = 121/198 (61.11%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVL-ILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSL 686
            MRPI+++GHERPLT +KYN DGDLLFSCAKD    VWF+ NGERLGTY GH GA+W CD+++ S  +++G+AD T +LW+V+TG QL+ + F +  + V+F   D   +  T+  M     + V R+    +D + E+ L ++   + +   A W  L++ + +  ED  V  +D  TG+ + ES +      TIT L
Sbjct:    1 MRPIILQGHERPLTQIKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDINKSSTLMVSGAADNTMRLWDVKTGKQLYKWEFPTAVKRVEFNEDDTRILAVTEERMGYAGTVTVFRVPISESDAAAETPLYVITTRESKATVAGWSYLSKFLFTGHEDGSVSRYDAITGEFV-ESKQVHNSGSTITDL 197          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_DROSI (Eukaryotic translation initiation factor 3 subunit I OS=Drosophila simulans GN=Trip1 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.209e-38
Identity = 80/198 (40.40%), Postives = 116/198 (58.59%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIA-GDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSL 686
            MRP++++GHER +T +KYN +GDLLFSC+KD  P VW++ NGERLGTY GH GAVWC DV  +S  LITG+ D TAK+W+VE G  + +    S  R+ +F+     A  +TD  M  +  + +  +   D +    E  L +   + +I   +WGPL+ TII+  ++  + IWD   G+  K  D  T H   I  +
Sbjct:    1 MRPLMLQGHERSITQIKYNREGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWESRKLITGAGDMTAKIWDVEYGTVIASIPTKSSVRTSNFSFSGNQAAYSTDKAMGQSCELFLIDVRNADSSLSEQEPTLRIPMTESKITSMLWGPLDETIITGHDNGNIAIWDIRKGQ--KVVDSGTDHSAGINDM 196          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_DROSE (Eukaryotic translation initiation factor 3 subunit I OS=Drosophila sechellia GN=Trip1 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.209e-38
Identity = 80/198 (40.40%), Postives = 116/198 (58.59%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIA-GDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSL 686
            MRP++++GHER +T +KYN +GDLLFSC+KD  P VW++ NGERLGTY GH GAVWC DV  +S  LITG+ D TAK+W+VE G  + +    S  R+ +F+     A  +TD  M  +  + +  +   D +    E  L +   + +I   +WGPL+ TII+  ++  + IWD   G+  K  D  T H   I  +
Sbjct:    1 MRPLMLQGHERSITQIKYNREGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWESRKLITGAGDMTAKIWDVEYGTVIASIPTKSSVRTSNFSFSGNQAAYSTDKAMGQSCELFLIDVRNADSSLSEQEPTLRIPMTESKITSMLWGPLDETIITGHDNGNIAIWDIRKGQ--KVVDSGTDHSAGINDM 196          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_DROME (Eukaryotic translation initiation factor 3 subunit I OS=Drosophila melanogaster GN=Trip1 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.209e-38
Identity = 80/198 (40.40%), Postives = 116/198 (58.59%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIA-GDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSL 686
            MRP++++GHER +T +KYN +GDLLFSC+KD  P VW++ NGERLGTY GH GAVWC DV  +S  LITG+ D TAK+W+VE G  + +    S  R+ +F+     A  +TD  M  +  + +  +   D +    E  L +   + +I   +WGPL+ TII+  ++  + IWD   G+  K  D  T H   I  +
Sbjct:    1 MRPLMLQGHERSITQIKYNREGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWESRKLITGAGDMTAKIWDVEYGTVIASIPTKSSVRTSNFSFSGNQAAYSTDKAMGQSCELFLIDVRNADSSLSEQEPTLRIPMTESKITSMLWGPLDETIITGHDNGNIAIWDIRKGQ--KVVDSGTDHSAGINDM 196          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_DROPS (Eukaryotic translation initiation factor 3 subunit I OS=Drosophila pseudoobscura pseudoobscura GN=Trip1 PE=3 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 3.517e-38
Identity = 80/190 (42.11%), Postives = 113/190 (59.47%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNS---AIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKE 656
            MRP++++GHER +T +KYN +GDLLFSC+KD  P VW++ NGERLGTY GH GAVWC DV  +S  LITG+ D T KLW+VE G  + +    S  R+ +F+     A  +TD  M  N     I V+      ADQ+    L +   + +I    WGPL+ TII+  ++  + IWD   G+ + +S  +
Sbjct:    1 MRPLMLQGHERSITQIKYNREGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWESRKLITGAGDMTTKLWDVEYGTIIASIPTKSSVRTSNFSFSGNQAAYSTDKAMGQNCELFIIDVRNADSTLADQT--PTLRIPMTESKITSMQWGPLDETIITGHDNGNIAIWDVRKGQKVVDSGSD 188          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_DROPE (Eukaryotic translation initiation factor 3 subunit I OS=Drosophila persimilis GN=Trip1 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.517e-38
Identity = 80/190 (42.11%), Postives = 113/190 (59.47%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNS---AIHVKRIAGDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKE 656
            MRP++++GHER +T +KYN +GDLLFSC+KD  P VW++ NGERLGTY GH GAVWC DV  +S  LITG+ D T KLW+VE G  + +    S  R+ +F+     A  +TD  M  N     I V+      ADQ+    L +   + +I    WGPL+ TII+  ++  + IWD   G+ + +S  +
Sbjct:    1 MRPLMLQGHERSITQIKYNREGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWESRKLITGAGDMTTKLWDVEYGTIIASIPTKSSVRTSNFSFSGNQAAYSTDKAMGQNCELFIIDVRNADSTLADQT--PTLRIPMTESKITSMQWGPLDETIITGHDNGNIAIWDVRKGQKVVDSGSD 188          
BLAST of CN189515 vs. ExPASy Swiss-Prot
Match: EIF3I_DROER (Eukaryotic translation initiation factor 3 subunit I OS=Drosophila erecta GN=Trip1 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.517e-38
Identity = 79/198 (39.90%), Postives = 115/198 (58.08%), Query Frame = 3
Query:   96 MRPILMKGHERPLTYLKYNEDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIA-GDPADQSGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKLLKESDKETGHKKTITSL 686
            MRP++++GHER +T +KYN +GDLLFSC+KD  P VW++ NGERLGTY GH GAVWC DV  +S  LITG+ D T K+W+VE G  + +    S  R+ +F+     A  +TD  M  +  + +  +   D +    E  L +   + +I   +WGPL+ TII+  ++  + IWD   G+  K  D  T H   I  +
Sbjct:    1 MRPLMLQGHERSITQIKYNREGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWESRKLITGAGDMTTKIWDVEYGTVIASIPTKSSVRTSNFSFSGNQAAYSTDKAMGQSCELFLIDVRNADSSLSEQEPTLRIPMTESKITSMLWGPLDETIITGHDNGNIAIWDIRKGQ--KVVDSGTDHSAGINDM 196          
The following BLAST results are available for this feature:
BLAST of CN189515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
EIF3I_ARATH1.965e-8977.39Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_CULQU1.526e-4143.01Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_AEDAE1.291e-4042.63Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_SCHPO8.371e-4040.91Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_DROSI1.209e-3840.40Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_DROSE1.209e-3840.40Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_DROME1.209e-3840.40Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_DROPS3.517e-3842.11Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_DROPE3.517e-3842.11Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_DROER3.517e-3839.90Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001P19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001P19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189515 ID=CN189515; Name=CN189515; organism=Citrus sinensis; type=EST; length=689bp
AGGCTTTGCGGTCTCAAGGCTTTCCAACGCTCCACCGGAAACTCCATTCG
TCGCGGAATTCAGCAAAACAGAGAAAGAAGAAGAAAAAAGCAAGCATGAG
ACCAATTTTGATGAAAGGCCATGAGAGGCCTTTAACATATCTTAAATACA
ACGAAGACGGAGATCTGCTCTTTTCATGTGCCAAGGATCACACACCCACC
GTTTGGTTCGCTGACAATGGCGAGCGTCTTGGCACCTACCGCGGCCACAA
CGGCGCCGTTTGGTGCTGCGATGTTTCAAGAGATTCGATGACGCTAATAA
CCGGGAGTGCTGACCAGACGGCGAAGCTATGGAATGTTGAAACAGGGGCT
CAGTTGTTCACATTCAATTTTGATTCTCCTGCTAGGTCTGTCGACTTTGC
TGTTGGTGATAAGCTTGCTGTGATTACTACTGATCCTTTCATGGAATTAA
ACTCAGCCATTCATGTCAAACGCATTGCAGGAGATCCTGCTGATCAGAGT
GGTGAATCTGTGCTTATTCTAAAAGGCCCTCAGGGAAGAATAAACAGAGC
AGTTTGGGGACCTCTAAACAGGACTATCATTAGTGCTGGAGAAGATGCTA
TAGTTCGTATTTGGGATACTGAGACAGGGAAACTGCTTAAAGAGTCGGAC
AAGGAAACTGGTCATAAAAAGACTATAACATCGCTTGCA
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