CN189495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189495 vs. ExPASy Swiss-Prot
Match: RN126_MOUSE (RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.397e-13 Identity = 30/70 (42.86%), Postives = 40/70 (57.14%), Query Frame = 1 Query: 142 PASKAXXXXXXXXXXXXGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQEL 351 PA K HV S C VCKE + LG R++PC H++H+ CI+PWL+ +SCPVCR+ L Sbjct: 206 PADKEKIQALPTVPVTEEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSL 275
BLAST of CN189495 vs. ExPASy Swiss-Prot
Match: RN126_XENTR (RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.795e-13 Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 1 Query: 196 HVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQEL 351 HV S C VCKE + +G R++PC H++H DCI+PWL+ ++CPVCR+ L Sbjct: 220 HVGSGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 271
BLAST of CN189495 vs. ExPASy Swiss-Prot
Match: RN126_HUMAN (RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.885e-13 Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 1 Query: 142 PASKAXXXXXXXXXXXXGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQEL 351 PA K HV S C VCK+ + LG R++PC H++H+ CI+PWL+ +SCPVCR+ L Sbjct: 204 PADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 273
BLAST of CN189495 vs. ExPASy Swiss-Prot
Match: RN126_BOVIN (RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.291e-12 Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 1 Query: 142 PASKAXXXXXXXXXXXXGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQEL 351 PA K HV S C VCK+ + LG R++PC H++H+ CI+PWL+ +SCPVCR+ L Sbjct: 207 PADKEKIQALPTVPVTEEHVGSGLECPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 276
BLAST of CN189495 vs. ExPASy Swiss-Prot
Match: R126A_XENLA (RING finger protein 126-A OS=Xenopus laevis GN=rnf126-A PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12 Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 1 Query: 196 HVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQEL 351 HV S C VCKE + +G R++PC H++H DCI+PWL+ ++CPVCR+ L Sbjct: 221 HVGSGLECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
BLAST of CN189495 vs. ExPASy Swiss-Prot
Match: R126B_XENLA (RING finger protein 126-B OS=Xenopus laevis GN=rnf126-B PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.876e-12 Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 1 Query: 196 HVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQEL 351 HV C VCKE + +G R++PC H++H DCI+PWL+ ++CPVCR+ L Sbjct: 221 HVGFGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
BLAST of CN189495 vs. ExPASy Swiss-Prot
Match: RN181_XENLA (E3 ubiquitin-protein ligase rnf181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.407e-12 Identity = 33/86 (38.37%), Postives = 42/86 (48.84%), Query Frame = 1 Query: 97 LSQIDLTALSRPENLPASKAXXXXXXXXXXXXGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELP 354 L +D T + PASK + C VC FE G R++PC+H++H CILPWL NSCP+CR ELP Sbjct: 39 LGAVDFTEWDQRLPPPASKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNSCPLCRHELP 124
BLAST of CN189495 vs. ExPASy Swiss-Prot
Match: RN181_XENTR (E3 ubiquitin-protein ligase rnf181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.093e-11 Identity = 32/86 (37.21%), Postives = 42/86 (48.84%), Query Frame = 1 Query: 97 LSQIDLTALSRPENLPASKAXXXXXXXXXXXXGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELP 354 L +D T + PA+K + C VC FE G R++PC+H++H CILPWL NSCP+CR ELP Sbjct: 39 LGALDFTEWDQRLPPPAAKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHELP 124
BLAST of CN189495 vs. ExPASy Swiss-Prot
Match: RN181_DANRE (E3 ubiquitin-protein ligase rnf181 OS=Danio rerio GN=rnf181 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.093e-11 Identity = 32/71 (45.07%), Postives = 36/71 (50.70%), Query Frame = 1 Query: 142 PASKAXXXXXXXXXXXXGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELP 354 PA+KA C VC FE REMPCKH++H CILPWL NSCP+CR ELP Sbjct: 54 PAAKAVVQSLPVVIISPEQADKGVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKTNSCPLCRLELP 124
BLAST of CN189495 vs. ExPASy Swiss-Prot
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11 Identity = 28/55 (50.91%), Postives = 35/55 (63.64%), Query Frame = 1 Query: 217 CAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELPXXXXXXXEE 381 CAVCK+ +G +++PC H YH DCI+PWL RNSCPVCR +L EE Sbjct: 257 CAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEEE 311 The following BLAST results are available for this feature:
BLAST of CN189495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189495 ID=CN189495; Name=CN189495; organism=Citrus sinensis; type=EST; length=738bpback to top |