CN189445

Overview
NameCN189445
Unique NameCN189445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10200 contig Csv1_Contig10200:1999..2786. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189445 vs. ExPASy Swiss-Prot
Match: SUSY_SOYBN (Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2)

HSP 1 Score: 355.525 bits (911), Expect = 1.848e-97
Identity = 167/190 (87.89%), Postives = 181/190 (95.26%), Query Frame = -3
Query:  210 KDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 779
            KDLEE+AEMKKMY LI+ YKLNGQFRWISSQMNRVRNGELYR ICDT+GAFVQPA+YEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG+HIDPYHG++AA++LVDFFEKCK DP++WDKIS  GL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDR ESRRYLEMFYALKYRKLAESVPLA E
Sbjct:  616 KDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTRGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVDFFEKCKLDPTHWDKISKAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAAE 805          
BLAST of CN189445 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 9.170e-97
Identity = 169/190 (88.95%), Postives = 182/190 (95.79%), Query Frame = -3
Query:  210 KDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 779
            KDLEE+AEMKKMY LI+ YKLNGQFRWISSQMNRVRNGELYR ICDTKGAFVQPA+YEAFGLTVVEAM  GLPTFAT  GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK KADPS+WDKISLGGL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE
Sbjct:  616 KDLEEKAEMKKMYELIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKADPSHWDKISLGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805          
BLAST of CN189445 vs. ExPASy Swiss-Prot
Match: SUSY_PHAAU (Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.564e-96
Identity = 168/190 (88.42%), Postives = 181/190 (95.26%), Query Frame = -3
Query:  210 KDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 779
            KDLEE+AEMKKMYSLI+ YKLNGQFRWISSQMNRVRNGELYR I DTKGAFVQPA+YEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK K DPS+WDKIS  GL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDR ESRRYLEMFYALKYRKLAESVPLAVE
Sbjct:  616 KDLEEKAEMKKMYSLIETYKLNGQFRWISSQMNRVRNGELYRVIADTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDPSHWDKISQAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVE 805          
BLAST of CN189445 vs. ExPASy Swiss-Prot
Match: SUS1_ARATH (Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1 PE=2 SV=3)

HSP 1 Score: 352.443 bits (903), Expect = 1.564e-96
Identity = 165/188 (87.77%), Postives = 180/188 (95.74%), Query Frame = -3
Query:  216 KDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLA 779
            KD EE+AEMKKMY LI++YKLNGQFRWISSQM+RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIV+GKSG+HIDPYHG+QAA+ L DFF KCK DPS+WD+IS GGL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDRLE+RRYLEMFYALKYR LA++VPLA
Sbjct:  618 KDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQAVPLA 805          
BLAST of CN189445 vs. ExPASy Swiss-Prot
Match: SUSY_MEDSA (Sucrose synthase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 2.259e-95
Identity = 168/190 (88.42%), Postives = 179/190 (94.21%), Query Frame = -3
Query:  210 KDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 779
            KDLEE AEMKKMY LI+ YKLNGQFRWISSQMNRVRNGELYR ICDTKGAFVQPA+YEAFGLTVVEAM  GLPTFAT  GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK KADPS+WDKIS GGL+RIEEKYTW IYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE
Sbjct:  616 KDLEEIAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKADPSHWDKISQGGLQRIEEKYTWTIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805          
BLAST of CN189445 vs. ExPASy Swiss-Prot
Match: SUS1_DAUCA (Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.853e-95
Identity = 166/188 (88.30%), Postives = 174/188 (92.55%), Query Frame = -3
Query:  216 KDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLA 779
            KDLEEQA+MKKMY LID YKLNGQFRWISSQMNRVRNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEIIV+GKSG+HIDPYHGEQ AE+LV+FFEKCK DPS WD IS GGLKRI+EKYTW+IYS+RLLTL GVYGFWKHVS LDRLE RRYLEMFYALKYRKLAESVPLA
Sbjct:  618 KDLEEQAQMKKMYELIDTYKLNGQFRWISSQMNRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIVHGKSGFHIDPYHGEQVAELLVNFFEKCKTDPSQWDAISAGGLKRIQEKYTWQIYSERLLTLAGVYGFWKHVSKLDRLEIRRYLEMFYALKYRKLAESVPLA 805          
BLAST of CN189445 vs. ExPASy Swiss-Prot
Match: SUS1_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 6.151e-93
Identity = 161/190 (84.74%), Postives = 174/190 (91.58%), Query Frame = -3
Query:  210 KDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 779
            KDLEEQAEMKKMY LI+ + LNGQFRWISSQMNRVRNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEIIV+GKSG+HIDPYHGEQAA++L DFFEKCK DPS+W+ IS+GGLKRIEEKYTW+IYS+ LLTL  VYGFWKHVS LDRLE RRYLEMFYALKYRK+AE+VPLA E
Sbjct:  616 KDLEEQAEMKKMYELIETHNLNGQFRWISSQMNRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADFFEKCKKDPSHWETISMGGLKRIEEKYTWQIYSESLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805          
BLAST of CN189445 vs. ExPASy Swiss-Prot
Match: SUSY_SOLLC (Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.790e-92
Identity = 160/190 (84.21%), Postives = 174/190 (91.58%), Query Frame = -3
Query:  210 KDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 779
            KDLEEQAEMKKMY LI+ + LNGQFRWISSQMNRVRNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEIIV+GKSG+HIDPYHGEQAA++L DFFEKCK +PS+W+ IS GGLKRI+EKYTW+IYS+RLLTL  VYGFWKHVS LDRLE RRYLEMFYALKYRK+AE+VPLA E
Sbjct:  616 KDLEEQAEMKKMYELIETHNLNGQFRWISSQMNRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADFFEKCKKEPSHWETISTGGLKRIQEKYTWQIYSERLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805          
BLAST of CN189445 vs. ExPASy Swiss-Prot
Match: SUSY_ALNGL (Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 6.801e-92
Identity = 163/191 (85.34%), Postives = 176/191 (92.15%), Query Frame = -3
Query:  210 KDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQ-PALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 779
            KD EE+AEM KM+ LI+ YKLNGQFRWISSQMNRVRNGELYRYI DTKG     PA+YEAFGLTVVE+MTCGLPTFATCKGGPAEIIV+GKSG+HIDPYHGEQAA++LVDFFEK KADPS+W KISLGGL+RI EKYTWKIYS+RLLTLTGV  FWKHVSNLDRLESRRY+EMFYALKYRKLAESVPLAVE
Sbjct:  613 KDNEEKAEMTKMHGLIETYKLNGQFRWISSQMNRVRNGELYRYIADTKGGLCAGPAIYEAFGLTVVESMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGEQAAQLLVDFFEKTKADPSHWAKISLGGLQRIHEKYTWKIYSERLLTLTGVTAFWKHVSNLDRLESRRYIEMFYALKYRKLAESVPLAVE 803          
BLAST of CN189445 vs. ExPASy Swiss-Prot
Match: SUS2_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 2.857e-90
Identity = 158/190 (83.16%), Postives = 172/190 (90.53%), Query Frame = -3
Query:  210 KDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 779
            KDLEEQAEMKKMY LI  + LNGQFRWISSQMNRVRNGELYRYI DT+GAFVQPA YEAFGLTVVEAM+CGLPTFAT +GGPAEIIV+GKSG+ IDPYHGEQAA++L DFFEKCK DPS+W+ IS GGLKRI+EKYTW+IYS RLLTL  VYGFWKHVS LDRLE RRYLEMFYALK+RKLA+ VPLAVE
Sbjct:  616 KDLEEQAEMKKMYELIKTHNLNGQFRWISSQMNRVRNGELYRYIADTRGAFVQPAFYEAFGLTVVEAMSCGLPTFATNQGGPAEIIVHGKSGFQIDPYHGEQAADLLADFFEKCKVDPSHWEAISEGGLKRIQEKYTWQIYSDRLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKFRKLAQLVPLAVE 805          
The following BLAST results are available for this feature:
BLAST of CN189445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SUSY_SOYBN1.848e-9787.89Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2[more]
SUSY_VICFA9.170e-9788.95Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]
SUSY_PHAAU1.564e-9688.42Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 S... [more]
SUS1_ARATH1.564e-9687.77Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1... [more]
SUSY_MEDSA2.259e-9588.42Sucrose synthase OS=Medicago sativa PE=2 SV=1[more]
SUS1_DAUCA3.853e-9588.30Sucrose synthase isoform 1 OS=Daucus carota PE=2 S... [more]
SUS1_SOLTU6.151e-9384.74Sucrose synthase OS=Solanum tuberosum PE=2 SV=1[more]
SUSY_SOLLC1.790e-9284.21Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1[more]
SUSY_ALNGL6.801e-9285.34Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 S... [more]
SUS2_SOLTU2.857e-9083.16Sucrose synthase OS=Solanum tuberosum PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001N24_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189445 ID=CN189445; Name=CN189445; organism=Citrus sinensis; type=EST; length=781bp
GCAACTATATGGAATTGATGAGGGTGCAACACCCAAAGTACAAACAATGC
TGAGAAATGCAAAAAGGAAAAAAAAAATTGAAAAAAGAAAATTTAAGCCG
GTAAAAAAGTCTTTGTCCAATCGCAATCCCAGAAGGGACATTATTCTCCA
CAACTCGAGAAATCTCCACTCGGACCAACCACCCTGAGAGCTTCCTCAAT
GTCCATTTACTCCACAGCCAGAGGAACAGATTCAGCCAGCTTACGGTACT
TGAGAGCATAAAACATTTCAAGGTATCGACGGCTCTCAAGCCGATCAAGG
TTAGATACATGTTTCCAGAACCCATAGACTCCAGTCAGGGTCAGAAGCCT
CTGAGAGTAAATTTTCCATGTATACTTCTCTTCAATACGCTTCAGGCCAC
CCAGTGATATCTTGTCCCAGTATGAGGGATCTGCCTTGCACTTCTCAAAG
AAGTCAACAAGGATCTCAGCAGCCTGCTCACCATGGTAAGGATCAATGTG
GTAGCCAGATTTCCCGTTAACGATAATCTCAGCGGGGCCACCCTTGCAAG
TTGCAAATGTTGGCAATCCACAGGTCATGGCCTCAACAACAGTCAAGCCA
AAGGCCTCATACAGTGCAGGTTGCACAAAAGCTCCCTTTGTATCACAAAT
GTACCGGTACAATTCACCGTTCCTGACCCGATTCATCTGAGAAGAGATCC
ATCGGAACTGGCCATTCAATTTGTATTGATCAATGAGGGAATACATCTTC
TTCATTTCAGCCTGTTCTTCCAAGTCCTTGG
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