CN189444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189444 vs. ExPASy Swiss-Prot
Match: TIF6B_ARATH (Protein TIFY 6B OS=Arabidopsis thaliana GN=TIFY6B PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.286e-24 Identity = 88/231 (38.10%), Postives = 124/231 (53.68%), Query Frame = 2 Query: 8 IVVKEEVNNDVRKEIGFSKGSAIQWPFSNKVSAVP-QFMSFKVAQEDKNKKILSDHLGSSG-FMPFS-AEAYEHNQRRGMAEVQKSFDLDRQGGTHISLTAYSVPHEVHSVHCSHDIKTFPVSNQ---AIPVSINNPVFKNQ-FATIGQNMGGANVKQQFLGGIPVTSPH-TVLPTIGSFGGVHESWNNIKTRGSP-QLTIFYAGTVNVFEDISPEKAQAIMLLAGNGSSI 673 I VKEE + R + + W FSNKVSA QF+SF+ QED+++K + HL SG FMP S A+ Y+ ++ + VQ ++ FP SNQ VS++ P F++ +A G++ N Q L G+P+ +P ++LP GS G + ++ K GSP QLTIFYAG+V V++DISPEKA+AIMLLAGNGSS+ Sbjct: 15 ITVKEETSESSRDS---APNRGMNWSFSNKVSASSSQFLSFRPTQEDRHRKSGNYHLPHSGSFMPSSVADVYDSTRKAPYSSVQ-------------------------------GVRMFPNSNQHEETNAVSMSMPGFQSHHYAPGGRSFMNNNNNSQPLVGVPIMAPPISILPPPGSIVGTTDIRSSSKPIGSPAQLTIFYAGSVCVYDDISPEKAKAIMLLAGNGSSM 211
BLAST of CN189444 vs. ExPASy Swiss-Prot
Match: TIF6A_ARATH (Protein TIFY 6A OS=Arabidopsis thaliana GN=TIFY6A PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19 Identity = 75/231 (32.47%), Postives = 103/231 (44.59%), Query Frame = 2 Query: 8 IVVKEEVNNDVRKEIGFSKGSAIQWPFSNKVSAVPQFMSFKVAQEDKNKKILSDHLGSSGFMPFSAEAYEHNQRRGMAEVQKSFDLDRQGGTHISLTAYSVPHEVHSVHCSHDIKTFPVSNQ----AIPVSINNPVFKNQFATIGQNMGGANVKQQFLGGIPVTSPHTVLPTIGSFGGVHESWNNIKTRGSP---QLTIFYAGTVNVFEDISPEKAQAIMLLAGNGSSIAP 679 I VKEE N D G + W FS+KV + PQF+SF +Q++ ++DHL SS M + NQR + +Q+ + FP S+Q I VS++ P + N F + Q LGG P+ +P V + I++ P QLTIFYAG+V V++DI+PEKAQAIMLLAGNG P Sbjct: 15 ITVKEETNEDSAPSRGM-----MDWSFSSKVGSGPQFLSFGTSQQETRVNTVNDHLLSSAAM-------DQNQRTYFSSLQED-------------------------------RVFPGSSQQDQTTITVSMSEPNYINSF-----------INHQHLGGSPIMAPPV---------SVFPAPTTIRSSSKPLPPQLTIFYAGSVLVYQDIAPEKAQAIMLLAGNGPHAKP 182 The following BLAST results are available for this feature:
BLAST of CN189444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189444 ID=CN189444; Name=CN189444; organism=Citrus sinensis; type=EST; length=686bpback to top |