CN189432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189432 vs. ExPASy Swiss-Prot
Match: FD6E2_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 4.169e-75 Identity = 126/155 (81.29%), Postives = 140/155 (90.32%), Query Frame = -1 Query: 283 DAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWYRNKI 747 DAG+LA++Y L+ L AKGL +V C+YG PLLVVNGFLVLIT LQHTHP+LPHY SSEWDW RGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYY+FD TPF KAMWREA+EC+YVEPD+ ++KGVFWY NK+ Sbjct: 229 DAGVLAVVYGLFRLAMAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYTSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYRFDETPFVKAMWREARECIYVEPDQSTESKGVFWYNNKL 383
BLAST of CN189432 vs. ExPASy Swiss-Prot
Match: FAD6E_BRAJU (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 8.694e-73 Identity = 124/155 (80.00%), Postives = 135/155 (87.10%), Query Frame = -1 Query: 283 DAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWYRNKI 747 DAGILA+ Y LY AA+G+ + C+YG PLL+VN FLVLIT LQHTHPSLPHY SSEWDW RGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAME TKAIKPILG+YYQFDGTP+ KAMWREAKEC+YVEPD + KGVFWY NK+ Sbjct: 230 DAGILAVCYGLYRYAAAQGVASMVCLYGVPLLIVNAFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEVTKAIKPILGDYYQFDGTPWVKAMWREAKECIYVEPDRQGEKKGVFWYNNKL 384
BLAST of CN189432 vs. ExPASy Swiss-Prot
Match: FD6E1_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.653e-71 Identity = 119/154 (77.27%), Postives = 134/154 (87.01%), Query Frame = -1 Query: 286 DAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWYRNK 747 D + ++ YSLY + KGLV++ C+YG PLL+VNGFLV IT LQHTH +LPHY SSEWDW +GALAT+DRDYGILNKVFH+ITDTHVAHHLFSTMPHYHAMEAT AIKPILGEYYQFD TPFYKA+WREA+ECLYVEPDEG KGV+WYRNK Sbjct: 233 DVALFSVTYSLYRVATLKGLVWLLCVYGVPLLIVNGFLVTITYLQHTHFALPHYDSSEWDWLKGALATMDRDYGILNKVFHHITDTHVAHHLFSTMPHYHAMEATNAIKPILGEYYQFDDTPFYKALWREARECLYVEPDEGTSEKGVYWYRNK 386
BLAST of CN189432 vs. ExPASy Swiss-Prot
Match: FAD6E_ARATH (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD2 PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 1.063e-70 Identity = 121/155 (78.06%), Postives = 135/155 (87.10%), Query Frame = -1 Query: 283 DAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWYRNKI 747 DAGILA+ + LY AA+G+ + C+YG PLL+VN FLVLIT LQHTHPSLPHY SSEWDW RGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHY+AMEATKAIKPILG+YYQFDGTP+Y AM+REAKEC+YVEPD KGV+WY NK+ Sbjct: 229 DAGILAVCFGLYRYAAAQGMASMICLYGVPLLIVNAFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYNAMEATKAIKPILGDYYQFDGTPWYVAMYREAKECIYVEPDREGDKKGVYWYNNKL 383
BLAST of CN189432 vs. ExPASy Swiss-Prot
Match: FAD12_CREAL (Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=2 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 4.960e-52 Identity = 90/151 (59.60%), Postives = 115/151 (76.16%), Query Frame = -1 Query: 295 DAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWY 747 D G+LA++Y + VAAKG +V CIYG P+L V F +IT L HTH SLPHY SSEW+W RGAL+T+DRD+G LN V H++T THV HHLFS +PHYHA EA AI +LG++Y+ D TP KAMWREAKEC+++EP++G +KGV+WY Sbjct: 222 DLGLLAVLYGVKLAVAAKGAAWVTCIYGIPVLGVFIFFDIITYLHHTHLSLPHYDSSEWNWLRGALSTIDRDFGFLNSVLHDVTHTHVMHHLFSYIPHYHAKEARDAINTVLGDFYKIDRTPILKAMWREAKECIFIEPEKGRGSKGVYWY 372
BLAST of CN189432 vs. ExPASy Swiss-Prot
Match: FAD12_MORAP (Delta(12) fatty acid desaturase OS=Mortierella alpina PE=2 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 1.039e-33 Identity = 75/144 (52.08%), Postives = 92/144 (63.89%), Query Frame = -1 Query: 319 DAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYG-ILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGD 747 D G+LA + +L L+ V Y P L VN +LVLIT LQHT P LPHY W++ RGAL TVDR +G L+ +FH I THVAHHLFS MP YHA EAT +K +LGEYY +D +P A+WR +EC +VE D GD Sbjct: 252 DLGVLAALGALIYASMQLSLLTVTKYYIVPYLFVNFWLVLITFLQHTDPKLPHYREGAWNFQRGALCTVDRSFGKFLDHMFHGIVHTHVAHHLFSQMPFYHAEEATYHLKKLLGEYYVYDPSPIVVAVWRSFRECRFVE-DHGD 394
BLAST of CN189432 vs. ExPASy Swiss-Prot
Match: FAD12_MORIS (Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.357e-33 Identity = 75/144 (52.08%), Postives = 92/144 (63.89%), Query Frame = -1 Query: 319 DAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYG-ILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGD 747 D G+LA + +L L+ V Y P L VN +LVLIT LQHT P LPHY W++ RGAL TVDR +G L+ +FH I THVAHHLFS MP YHA EAT +K +LGEYY +D +P A+WR +EC +VE D GD Sbjct: 252 DLGVLAALGALIYASMQLSLLTVTKYYIIPYLFVNFWLVLITFLQHTDPKLPHYREGAWNFQRGALCTVDRSFGKFLDHMFHGIVHTHVAHHLFSQMPFYHAEEATYHLKKLLGEYYVYDPSPIVVAVWRSFRECRFVE-DHGD 394
BLAST of CN189432 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.663e-23 Identity = 63/141 (44.68%), Postives = 80/141 (56.74%), Query Frame = -1 Query: 319 LYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHT--HPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYY----QFDGTPFY--KAMWREAKECLYVEPDEGD 717 L L A G + +F IYG P L+ +L +T L H LP Y EW + RG L TVDRDYG+ N + H+I THV HHLF +PHYH EATKA KP+LG+YY + PF+ K + R K+ YV D G+ Sbjct: 223 LLYLCTAFGSLQMFKIYGAPYLIFVMWLDFVTYLHHHGYEKKLPWYRGKEWSYLRGGLTTVDRDYGLFNNIHHDI-GTHVIHHLFPQIPHYHLREATKAAKPVLGKYYREPKKSGPIPFHLVKDLTRSMKQDHYVS-DSGE 361
BLAST of CN189432 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.556e-21 Identity = 51/114 (44.74%), Postives = 69/114 (60.53%), Query Frame = -1 Query: 397 AMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHT--HPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 732 AM L CL G + + +YG P + +L +T L H LP Y EW + RG L T+DRDYG++N + H+I THV HHLF +PHYH +EAT+A KP+LG+YY+ Sbjct: 284 AMAALLVCLNFTIGPIQMLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 396
BLAST of CN189432 vs. ExPASy Swiss-Prot
Match: FAD3D_ARATH (Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.032e-21 Identity = 51/114 (44.74%), Postives = 68/114 (59.65%), Query Frame = -1 Query: 397 AMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHT--HPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 732 AM L CL G + + +YG P + +L +T L H LP Y EW + RG L T+DRDYG +N + H+I THV HHLF +PHYH +EAT+A KP+LG+YY+ Sbjct: 277 AMAALLVCLNFVMGPIQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 389 The following BLAST results are available for this feature:
BLAST of CN189432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189432 ID=CN189432; Name=CN189432; organism=Citrus sinensis; type=EST; length=747bpback to top |