CN189411
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189411 vs. ExPASy Swiss-Prot
Match: FB233_ARATH (F-box protein At4g12560 OS=Arabidopsis thaliana GN=At4g12560 PE=2 SV=2) HSP 1 Score: 235.728 bits (600), Expect = 1.546e-61 Identity = 120/214 (56.07%), Postives = 146/214 (68.22%), Query Frame = 1 Query: 7 LHLYSVELDSLDKAVPFNHYPESIWTGTEVFGSCNGLLALSNSDQDIALFNPATRQLFKLPVEYIDLPDKSCIRGFVFYGFGHDLVSDDYKVVRMVQFKKDEDDNLGCFVEYEVKVFSLKNRSWTRVKKLPNYLRFMFQFYFHLLHRRGYGVYVNGVIHWVSPRRPEFGIGNLIVAFDLGLEEFRLLPQPNYGAR-EKDFVLDVGALEGHMCLM 645 L LYSV+LDSLD H P TEVFGS NGL+ LSNS D+A+FNP+TRQ+ +LP IDLPD S RG+VFYG G+D VSDDYKVVRMVQFK D +D LGC YEVKVFSLK SW R++ + + ++ +F FY+HLL+RRGYGV +HWV PRRP NLIV FDL LEEF ++ P A D +D+G L+G +CLM Sbjct: 63 LRLYSVDLDSLDSVSDVEH-PMKRGGPTEVFGSSNGLIGLSNSPTDLAVFNPSTRQIHRLPPSSIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLM 275
BLAST of CN189411 vs. ExPASy Swiss-Prot
Match: FB244_ARATH (F-box protein At4g22390 OS=Arabidopsis thaliana GN=At4g22390 PE=2 SV=3) HSP 1 Score: 168.318 bits (425), Expect = 3.030e-41 Identity = 95/212 (44.81%), Postives = 129/212 (60.85%), Query Frame = 1 Query: 13 LYSVELDSLDKAVPFNHYPESIWTGTEVFGSCNGLLALSNSDQDIALFNPATRQLFKLPVEYIDLPDKSCIRGFVFYGFGHDLVSDDYKVVRMVQFK-KDEDDNLGCFVEYEVKVFSLKNRSWTRVKKLPNYLRFMFQFYFHLLHRRGYGVYVNGVIHWVSPRRPEFGIGNLIVAFDLGLEEFRLLPQPNYGAREKDFVLDVGALEGHMCLM 645 L +VELDS + H P TEVFGS NG++ L NS D+A+FNP+TR++ +LP+E ID P++ R +VFYG G+D V DD+KVVR+VQ K K+ C V EVKVFSLK SW RV + + +Y+HLL RRGYGV VN +HW+ PRR N I+ +DL ++ +L P E + +D+G L+G +CLM Sbjct: 65 LRTVELDSPENVSDIPH-PLQAGGFTEVFGSFNGVIGLCNSPVDLAIFNPSTRKIHRLPIEPIDFPERDITREYVFYGLGYDSVGDDFKVVRIVQCKLKEGKKKFPCPV--EVKVFSLKKNSWKRVCLMFEFQILWISYYYHLLPRRGYGVVVNNHLHWILPRRQGVIAFNAIIKYDLASDDIGVLSFPQELYIEDN--MDIGVLDGCVCLM 271
BLAST of CN189411 vs. ExPASy Swiss-Prot
Match: FBK50_ARATH (F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana GN=At3g06240 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.374e-16 Identity = 63/189 (33.33%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 91 EVFGSCNGLLALSNSDQDIALFNPATRQLFKLPVEYIDLPDKSCIRGFVFYGFGHDLVSDDYKVVRMVQFKKDEDDNLGCFVEYEVKVFSLKNRSWTRVKKLPNYLRFMFQFYFHLLHRRGYGVYVNGVIHWVSPRRPEFGIGNLIVAFDLGLEEFRLLPQPNYGA----REKDFVLDVGALEGHMCLM 645 E+ GS NGL+ +S + + L+NP T +LP + + F YGFG D ++DDYK+V++V +D D V+SLK SW R+ L Y H GV+ NG IHWV ++VAFD+ EEFR +P P+ R +FV VG+L G +C++ Sbjct: 164 EIVGSSNGLVCISPGEGAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQTYGFGFDGLTDDYKLVKLVATSEDILD---------ASVYSLKADSWRRICNLN---------YEHNDGSYTSGVHFNGAIHWVFTESRH--NQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFV--VGSLNGRLCVV 330
BLAST of CN189411 vs. ExPASy Swiss-Prot
Match: FBK67_ARATH (F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana GN=At3g23880 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.585e-12 Identity = 48/186 (25.81%), Postives = 90/186 (48.39%), Query Frame = 1 Query: 91 EVFGSCNGLLALS-NSDQDIALFNPATRQLFKLPVEYIDLPDKSCIRGFVFYGFGHDLVSDDYKVVRMVQFKKDEDDNLGCFVEYEVKVFSLKNRSWTRVKKLPNYLRFMFQFYFHLLHRRGYGVYVNGVIHWVSPRRPEFGIGNLIVAFDLGLEEFRLLPQPNYGAREKDFVLDVGALEGHMCLM 645 +V G+C+GL+ + D+ + L+NP + +L ++ D C+ V YGFG+D DDYKVV ++Q + V+ E K++S + + W P+ + + + G+Y+NG ++W + I+++D+ +EF+ LP P R F + +G L G + ++ Sbjct: 111 QVVGTCHGLVCFHVDYDKSLYLWNPTIKLQQRLSSSDLETSDDECV---VTYGFGYDESEDDYKVVALLQQRHQ--------VKIETKIYSTRQKLWRSNTSFPSGV--------VVADKSRSGIYINGTLNWAATSSSS---SWTIISYDMSRDEFKELPGPVCCGR-GCFTMTLGDLRGCLSMV 273
BLAST of CN189411 vs. ExPASy Swiss-Prot
Match: FB135_ARATH (F-box protein At3g07870 OS=Arabidopsis thaliana GN=At3g07870 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.502e-11 Identity = 57/184 (30.98%), Postives = 95/184 (51.63%), Query Frame = 1 Query: 91 EVFGSCNGLLALSNS--DQDIALFNPATRQLFKLPVEYIDLPDKSCIRGFVFYGFGHDLVSDDYKVVRMVQFKKDEDDNLGCF-----VEY---EVKVFSLKNR------SWTRVKKLPNYLRFMFQFYFHLLHRRGYGVYVNGVIHWVS-PRR--PEFGIGNLIVAFDLGLEEFRLLPQPNYG 585 +V GSCNGLL LS+S + + L+NP T +LP D+ + +GFG ++ +YKV+++V F+ +N G + ++Y EV++ +L ++ SW + K P ++F +R VNG +H+V+ PRR P+ V+FDL EEF+ +P+P+ G Sbjct: 118 DVVGSCNGLLCLSDSLYNDSLYLYNPFTTNSLELPECSNKYHDQELV-----FGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAP------YKFV-----KRSSEALVNGRLHFVTRPRRHVPD----RKFVSFDLEDEEFKEIPKPDCG 281 The following BLAST results are available for this feature:
BLAST of CN189411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189411 ID=CN189411; Name=CN189411; organism=Citrus sinensis; type=EST; length=647bpback to top |