Characterization of microsatellite markers in mandarin orange (Citrus reticulata Blanco)

Publication Overview
TitleCharacterization of microsatellite markers in mandarin orange (Citrus reticulata Blanco)
AuthorsFROELICHER Y, DAMBIER D, BASSENE J, COSTANTINO G, LOTFY S, DIDOUT C, BEAUMONT V, BROTTIER P, RISTERUCCI A, LURO F, OLLITRAULT P
TypeJournal Article
Journal NameMolecular ecology resources
Volume8
Issue1
Year2008
Page(s)119-122
CitationFROELICHER Y, DAMBIER D, BASSENE J, COSTANTINO G, LOTFY S, DIDOUT C, BEAUMONT V, BROTTIER P, RISTERUCCI A, LURO F, OLLITRAULT P. Characterization of microsatellite markers in mandarin orange (Citrus reticulata Blanco). Molecular ecology resources. 2008; 8(1):119-122.

Abstract

A dinucleotide-enriched genomic library was obtained from mandarin orange (Citrus reticulata Blanco). A subset of 101 positive clones was sequenced and primers were designed. The loci were screened for levels of variation using 26-29 wild mandarin oranges collected in Vietnam. Forty-three loci were polymorphic with the number of alleles ranging from two to 18. The observed heterozygosity (HO) and expected heterozygosity (HE) were from 0.03 to 0.96 and from 0.03 to 0.92, respectively.
Stocks
This publication contains information about 2 stocks:
Stock NameUniquenameType
BlancoBlancoaccession
mandarinmandarinaccession
Features
This publication contains information about 86 features:
Feature NameUniquenameType
Ci01A07Ci01A07genetic_marker
Ci01C07Ci01C07genetic_marker
Ci01C09Ci01C09genetic_marker
Ci01D11Ci01D11genetic_marker
Ci01D12Ci01D12genetic_marker
Ci01G11Ci01G11genetic_marker
Ci01H05Ci01H05genetic_marker
Ci02A04Ci02A04genetic_marker
Ci02B07Ci02B07genetic_marker
Ci02B10Ci02B10genetic_marker
Ci02F03Ci02F03genetic_marker
Ci02F07Ci02F07genetic_marker
Ci06A05bCi06A05bgenetic_marker
Ci07B09Ci07B09genetic_marker
Ci07C07Ci07C07genetic_marker
Ci07C09Ci07C09genetic_marker
Ci07D10Ci07D10genetic_marker
Ci07E06Ci07E06genetic_marker
Ci07G07Ci07G07genetic_marker
Ci08A10Ci08A10genetic_marker
Ci08C05Ci08C05genetic_marker
mCrCIR01B02mCrCIR01B02genetic_marker
mCrCIR01B10mCrCIR01B10genetic_marker
mCrCIR01D06amCrCIR01D06agenetic_marker
mCrCIR01E02mCrCIR01E02genetic_marker

Pages

Properties
Additional details for this publication include:
Property NameValue
Publication Model[electronic resource].
Publication TypeJournal Article
Publication Date2008
Published Location|||
Language Abbreng
URLhttp://dx.doi.org/10.1111/j.1471-8286.2007.01893.x
KeywordsCitrus, genetic variation, Rutaceae, microsatellite repeats, molecular marker, STMS
Cross References
This publication is also available in the following databases:
DatabaseAccession
AGL: USDA National Agricultural LibraryAGL:3986501
PMID: PubMedPMID:21585732