CN189374
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189374 vs. ExPASy Swiss-Prot
Match: YK17_SCHPO (Membrane protein PB1A10.07c OS=Schizosaccharomyces pombe GN=SPAPB1A10.07c PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.262e-15 Identity = 56/172 (32.56%), Postives = 81/172 (47.09%), Query Frame = -2 Query: 180 YCMYLCYSGLSSEPRDYECNGLHRHSKAVYTGSLTLGLITTVLSVVYSAVRAGXXXXXXXXXXXPRA-----GGGKPLLPMXXXXXXXXXXXXKPVTYSYAFFHIIFSLASMYSAMLLTGWST-SVGESGK---LVDVG--WPSVWVRILTGWATAALYMWSLVAPILFPDR 662 Y YL S L++ P + +CN + S +G T +++YSAVRA A G PL Y++ +FHI+F LA+ Y+A LLT W+T SV E+ K V +G + +VWV+I+T W LY+WS +AP+ FP R Sbjct: 273 YTCYLILSALANRPDEGQCNPWGNSASGTREFSKVIGAAFTFFTILYSAVRAASSRESDDSYSYLYADSHDMGVSTPL------EDGSSEEDKHQSDYNFIWFHIVFVLAAFYTASLLTNWNTTSVYENQKNDVFVRIGFSYAAVWVKIITSWVCHGLYVWSCLAPVFFPYR 438
BLAST of CN189374 vs. ExPASy Swiss-Prot
Match: SERIC_DICDI (Probable serine incorporator OS=Dictyostelium discoideum GN=serinc PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15 Identity = 53/172 (30.81%), Postives = 77/172 (44.77%), Query Frame = -2 Query: 180 YCMYLCYSGLSSEPRDYECNGLHRHSKAVYTGSLTLGLITTVLSVVYSAVRAGXXXXXXXXXXXPRAGGGKPLLPMXXXXXXXXXXXXKPVTYSYAFFHIIFSLASMYSAMLLTGW-----------STSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDR 662 YC YL YS ++SEP C+ + S T + +G + T++SV YSA R+ + P Y+Y+FFH F+ +MY + LLT W STS S VD G SVWV++++ W LY+W+L+ PIL +R Sbjct: 250 YCTYLIYSAINSEPPG-TCSSNNTSSPKEST--IIIGAVFTIISVCYSAFRSSDSTELLGNHNHYSSIPTDPNAETTGVADDECEC----TAYNYSFFHFTFACGAMYLSALLTNWATMTSTDITSSSTSSSNSTISVDSGMVSVWVKVVSSWVVVLLYLWTLIGPILLRNR 414
BLAST of CN189374 vs. ExPASy Swiss-Prot
Match: SERC2_MOUSE (Serine incorporator 2 OS=Mus musculus GN=Serinc2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.597e-15 Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = -2 Query: 174 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 392 VTYSY+FFH LAS++ M LT W S GE+ K++ W SVWV+I WA LY+W+LVAP+L P+R+F Sbjct: 379 VTYSYSFFHFCLVLASLHVMMTLTNWY-SPGETRKMIST-WTSVWVKICASWAGLFLYLWTLVAPLLLPNRDF 449
BLAST of CN189374 vs. ExPASy Swiss-Prot
Match: SERIC_NEMVE (Probable serine incorporator OS=Nematostella vectensis GN=serinc PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.466e-14 Identity = 54/189 (28.57%), Postives = 79/189 (41.80%), Query Frame = -2 Query: 174 YCMYLCYSGLSSEPRDYECNGLHRH--SKAVYTGSLTLGLITTVLSVVYSAVRAGXXXXXXXXXXXPRAGGGKP------------------------LLPMXXXXXXXXXXXXKPVTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 662 Y +YL +S LS +P D CNG + + A +G+I + VVY++VR + G P L+ V YSY+F+H + LAS+Y M LT W VG + +VWV+I + W +Y+W+L+AP LFPDR+F Sbjct: 274 YTVYLTWSALSFQP-DKNCNGFYETHITLAGMDSQAIIGVILMFVMVVYASVRTASSSQVG------KLGMSSPKHSSALDKETTVLSEGDETRSDVGLVEEGGEGRRVYDDEDGGVAYSYSFYHFMLMLASLYIMMTLTNWYKPVGSDFSKLQYSETAVWVKIASSWLCQLIYIWTLLAPALFPDRDF 455
BLAST of CN189374 vs. ExPASy Swiss-Prot
Match: SERC2_BOVIN (Serine incorporator 2 OS=Bos taurus GN=SERINC2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.505e-14 Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = -2 Query: 174 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 392 VTYSY+FFH+ LAS++ M LT W GE+ K++ W +VWV+I W LY+W+LVAP+L P+R+F Sbjct: 381 VTYSYSFFHLCLVLASVHIMMTLTNWYRP-GETRKMIST-WTAVWVKICASWTGLLLYLWTLVAPLLLPNRDF 451
BLAST of CN189374 vs. ExPASy Swiss-Prot
Match: SERIC_MONBE (Probable serine incorporator OS=Monosiga brevicollis GN=serinc PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.118e-13 Identity = 30/73 (41.10%), Postives = 51/73 (69.86%), Query Frame = -2 Query: 174 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 392 V YS++FFH+ F++A++Y M+LT W +S ++ + GW SVWV++++ W LY W+++AP+ PDR+F Sbjct: 412 VRYSWSFFHLTFAVAALYLMMVLTEWDSS--DADVRIGKGWASVWVQVVSSWVIFLLYGWTMMAPVCLPDRDF 482
BLAST of CN189374 vs. ExPASy Swiss-Prot
Match: SERC2_HUMAN (Serine incorporator 2 OS=Homo sapiens GN=SERINC2 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.717e-13 Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = -2 Query: 174 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 392 VTYSY+FFH LAS++ M LT W GE+ K++ W +VWV+I WA LY+W+LVAP+L +R+F Sbjct: 385 VTYSYSFFHFCLVLASLHVMMTLTNWYKP-GETRKMIST-WTAVWVKICASWAGLLLYLWTLVAPLLLRNRDF 455
BLAST of CN189374 vs. ExPASy Swiss-Prot
Match: SERC1_BOVIN (Serine incorporator 1 OS=Bos taurus GN=SERINC1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.161e-13 Identity = 56/186 (30.11%), Postives = 81/186 (43.55%), Query Frame = -2 Query: 174 YCMYLCYSGLSSEPRDYECN-------GLHRHSKAVYTGSLT--------LGLITTVLSVVYSAVRAGXXXXXXXXXXXP------RAGGGKP--LLPMXXXXXXXXXXXXKPVTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 662 Y MYL +S +++EP + ECN G + S G +GLI +L V YS++R GG + L VTYSY+FFH + LAS+Y M LT W E + + W +VWV+I + W LY+W+LVAP++ +R+F Sbjct: 270 YTMYLTWSAMTNEP-ETECNPSLLNIIGYNTTSTVSKEGQSVQWWHTQGIIGLILFLLCVFYSSIRTSNNSQVNKLTLTSDESTLIEDGGARNDGSLEDGDDVHRAVDNERDGVTYSYSFFHFMLFLASLYIMMTLTNWYRY--EPSREMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLTNRDF 452
BLAST of CN189374 vs. ExPASy Swiss-Prot
Match: SERC1_PONAB (Serine incorporator 1 OS=Pongo abelii GN=SERINC1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 55/186 (29.57%), Postives = 80/186 (43.01%), Query Frame = -2 Query: 174 YCMYLCYSGLSSEPRDYECN-------GLHRHSKAVYTGSLT--------LGLITTVLSVVYSAVRAGXXXXXXXXXXXP------RAGGGKP--LLPMXXXXXXXXXXXXKPVTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 662 Y MYL +S +++EP + CN G + S G +GLI +L V YS++R GG + L VTYSY+FFH + LAS+Y M LT W E + + W +VWV+I + W LY+W+LVAP++ +R+F Sbjct: 270 YTMYLTWSAMTNEP-ETNCNPSLLSIIGYNTTSTVPKEGQSVQWWHAQGIIGLILFLLCVFYSSIRTSNNSQVNKLTLTSDESTLIEDGGARSDGSLEDGDDVHRAVDNERDGVTYSYSFFHFMLFLASLYIMMTLTNWYRY--EPSREMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLTNRDF 452
BLAST of CN189374 vs. ExPASy Swiss-Prot
Match: SERC1_HUMAN (Serine incorporator 1 OS=Homo sapiens GN=SERINC1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 55/186 (29.57%), Postives = 80/186 (43.01%), Query Frame = -2 Query: 174 YCMYLCYSGLSSEPRDYECN-------GLHRHSKAVYTGSLT--------LGLITTVLSVVYSAVRAGXXXXXXXXXXXP------RAGGGKP--LLPMXXXXXXXXXXXXKPVTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 662 Y MYL +S +++EP + CN G + S G +GLI +L V YS++R GG + L VTYSY+FFH + LAS+Y M LT W E + + W +VWV+I + W LY+W+LVAP++ +R+F Sbjct: 270 YTMYLTWSAMTNEP-ETNCNPSLLSIIGYNTTSTVPKEGQSVQWWHAQGIIGLILFLLCVFYSSIRTSNNSQVNKLTLTSDESTLIEDGGARSDGSLEDGDDVHRAVDNERDGVTYSYSFFHFMLFLASLYIMMTLTNWYRY--EPSREMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLTNRDF 452 The following BLAST results are available for this feature:
BLAST of CN189374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189374 ID=CN189374; Name=CN189374; organism=Citrus sinensis; type=EST; length=663bpback to top |