EY676445

Overview
NameEY676445
Unique NameEY676445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1058
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676445 vs. ExPASy Swiss-Prot
Match: MFP_ORYSJ (Peroxisomal fatty acid beta-oxidation multifunctional protein OS=Oryza sativa subsp. japonica GN=MFP PE=1 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 4.341e-48
Identity = 105/180 (58.33%), Postives = 133/180 (73.89%), Query Frame = 3
Query:    3 RRIP--VGIPR----------VDHASGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKTKGCKEKLL*LEAVWMGSGIATA 506
            +R+P  VG+P+          +    G + GL+DA+ + +EL+K+SRLWAL+IA  RKPWIRSL RTD+LGSLSEAR VL  AR QAKK A N+PQHQACLDV+EEG++ GG++GVLKEAKVFKELV+  TS+ LVH FFAQR T+KVP VTD+ LK +  + K+  +    MGSGIATA
Sbjct:  149 QRLPRLVGLPKAIEMMLQSKFITAKEGKEGGLVDALCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLSEARSVLNSARQQAKKVAANLPQHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKALVHAFFAQRLTTKVPGVTDVQLKPRKIR-KVAVIGGGLMGSGIATA 327          
BLAST of EY676445 vs. ExPASy Swiss-Prot
Match: MFPA_CUCSA (Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.072e-38
Identity = 81/151 (53.64%), Postives = 109/151 (72.19%), Query Frame = 3
Query:   54 LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKTKGCKEKLL*LEAVWMGSGIATA 506
            LGL+DA+V  EEL+  +R WAL+I  RR+PW+ SLHRTDKL SL+EAR++  LAR QAKK  PN+    AC+D +E G+V G  +G+ KEA+ F+ L+  DT + L+H+FFAQR+T+KVP VTD+GL  +  K K+  +    MGSGIATA
Sbjct:  181 LGLVDAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLAEARKIFNLARAQAKKQYPNLKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKSLIHIFFAQRSTTKVPGVTDLGLVPRQIK-KVAIVGGGLMGSGIATA 330          
BLAST of EY676445 vs. ExPASy Swiss-Prot
Match: MFPA_BRANA (Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 1.185e-37
Identity = 84/154 (54.55%), Postives = 107/154 (69.48%), Query Frame = 3
Query:   45 GWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKTKGCKEKLL*LEAVWMGSGIATA 506
            G  LGLIDAVV   ELL  +R WALDIA RRKPW+ S+ +TDKL  L EARE+LK A+ Q ++ APNM     CL+ +E GIV G  +G+ KEA+V  E++ LDT++GL+HVFF+QR T+KVP VTD GL  +    K+  +    MGSGIATA
Sbjct:  178 GHSLGLIDAVVPPAELLNAARRWALDIAERRKPWVSSVLKTDKLPPLGEAREILKFAKDQTRRQAPNMKHPLMCLEAVEVGIVSGSRAGLEKEAQVGSEVINLDTTKGLIHVFFSQRGTTKVPGVTDRGLVPRKI-NKVAIIGGGLMGSGIATA 330          
The following BLAST results are available for this feature:
BLAST of EY676445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MFP_ORYSJ4.341e-4858.33Peroxisomal fatty acid beta-oxidation multifunctio... [more]
MFPA_CUCSA1.072e-3853.64Glyoxysomal fatty acid beta-oxidation multifunctio... [more]
MFPA_BRANA1.185e-3754.55Glyoxysomal fatty acid beta-oxidation multifunctio... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-022-G05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676445 ID=EY676445; Name=EY676445; organism=Citrus sinensis; type=EST; length=1058bp
CCCGGCGGATACCGGTCGGGATTCCCCGGGTCGACCACGCGTCCGGCTGG
AAGCTGGGTCTAATTGATGCTGTTGTGACTTCTGAAGAGTTGCTGAAAGT
ATCTCGACTCTGGGCTTTAGACATTGCAGCAAGGCGCAAACCATGGATAC
GTTCCCTTCACAGGACAGACAAACTTGGTTCTCTTTCTGAAGCAAGAGAG
GTGTTGAAACTTGCTAGACTACAAGCCAAGAAGACTGCCCCAAATATGCC
TCAGCATCAAGCATGCCTTGATGTGATTGAGGAGGGTATCGTTCATGGAG
GATATAGTGGCGTTTTGAAGGAGGCCAAAGTTTTCAAGGAGTTAGTCATG
TTAGACACTTCCAGAGGTCTTGTTCATGTCTTTTTCGCACAACGTGCAAC
ATCAAAGGTGCCTAATGTAACTGATATTGGTCTCAAAACCAAGGGGTGTA
AAGAAAAGTTGCTGTGATTGGAGGCGGTCTGGATGGGTTCGGGCATAGCA
ACTGCGCCATATTCTGAACAAATATTTATGTTTGTTTCTCAGGAAGTTAA
TTCCGAAAAACTTCTGAAAAGGGAAAAAAAACAATAGAAACCAAAAATGT
TCCAAGGCTTGGGTAACCAAGAGGAAAATTGAAACCGGGGAAAAGCAAAC
AAAGGGCCCTCAAAATGCCTTAAAGGAGGGCCGGGACTACCCCCAAAAAT
TTTAAAAAAATGTTTGAACTGGGGCCTTAAAGGGGCCAGTCCTTTGGAAA
GGGGTTCCCCTCTAAAAAAAAAAAAAAAATTTTCACCCGAAAATTTAAAA
AAAAAGCTGGGCCCCCCCCCCCTTGGGCTTTTTTGGGAAAACAAAAACTT
TTTGCCTATTTGGTCCGTGAAAAAGTGTGTTGGGGGAAAAAAAAAACACC
CCCCTCCCCAGGGGATCCAAATTATTAAGGGGGGGGGACATTTTTTTTTT
TTCTCCTTCCGACGGCCCCTCTGGTGTTGATGCCCCCCCTTTTTTTTTGA
AGAAAAAAAATTTATGTGGGGAAAAAAAAAAAAAGAAAAAAAACAATATT
TTTTTTCA
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