CN189357

Overview
NameCN189357
Unique NameCN189357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2726 contig Csv1_Contig2726:1..594. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189357 vs. ExPASy Swiss-Prot
Match: SUT32_ARATH (Sulfate transporter 3.2 OS=Arabidopsis thaliana GN=SULTR3;2 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.478e-29
Identity = 63/89 (70.79%), Postives = 74/89 (83.15%), Query Frame = -2
Query:  324 SEESSLHYVILDMGAVGNIDTSGISMLEEVKKTLDRRELKLVLANPGAEVTKKLDKSKFIENMGQEWIYLTVGEAVTACNFRLHTCEPN 590
            S + SL Y++LDM AVGNIDTSGISMLEE+ K L RRELKLV+ANPGAEV KKL KS FIE++G+E IYLTV EAV AC+F LHT +P+
Sbjct:  549 SGDISLQYIVLDMSAVGNIDTSGISMLEELNKILGRRELKLVIANPGAEVMKKLSKSTFIESIGKERIYLTVAEAVAACDFMLHTAKPD 637          
BLAST of CN189357 vs. ExPASy Swiss-Prot
Match: SUT31_ARATH (Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.478e-29
Identity = 64/102 (62.75%), Postives = 83/102 (81.37%), Query Frame = -2
Query:  288 SEESSLHYVILDMGAVGNIDTSGISMLEEVKKTLDRRELKLVLANPGAEVTKKLDKSKFI-ENMGQEWIYLTVGEAVTACNFRLHTCEPNPEKAESEPCDNV 590
            S ESSL Y+ILDM AVGNIDTSGISM+ E+KK +DRR LKLVL+NP  EV KKL +SKFI +++G+EW++LTVGEAV AC++ LHT +  P  +++EP +NV
Sbjct:  558 SGESSLQYIILDMSAVGNIDTSGISMMVEIKKVIDRRALKLVLSNPKGEVVKKLTRSKFIGDHLGKEWMFLTVGEAVEACSYMLHTFKTEP-ASKNEPWNNV 658          
BLAST of CN189357 vs. ExPASy Swiss-Prot
Match: SUT11_ARATH (Sulfate transporter 1.1 OS=Arabidopsis thaliana GN=SULTR1;1 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.395e-15
Identity = 37/76 (48.68%), Postives = 60/76 (78.95%), Query Frame = -2
Query:  351 SLHYVILDMGAVGNIDTSGISMLEEVKKTLDRRELKLVLANPGAEVTKKLDKSKFIENMGQEWIYLTVGEAVTACN 578
            ++ +VI++M  V +IDTSGI  +EE+ K+L+++E++L+LANPG  V +KL  SKF+E +G++ I+LTVG+AV  C+
Sbjct:  566 AIRFVIIEMSPVTDIDTSGIHSIEELLKSLEKQEIQLILANPGPVVIEKLYASKFVEEIGEKNIFLTVGDAVAVCS 641          
BLAST of CN189357 vs. ExPASy Swiss-Prot
Match: SUT12_ARATH (Sulfate transporter 1.2 OS=Arabidopsis thaliana GN=SULTR1;2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.823e-13
Identity = 36/74 (48.65%), Postives = 54/74 (72.97%), Query Frame = -2
Query:  354 LHYVILDMGAVGNIDTSGISMLEEVKKTLDRRELKLVLANPGAEVTKKLDKSKFIENMGQEWIYLTVGEAVTAC 575
            + ++I++M  V +IDTSGI  LE++ K+L +R+++L+LANPG  V  KL  S F + +GQ+ IYLTV +AV AC
Sbjct:  572 IQFLIIEMSPVTDIDTSGIHALEDLYKSLQKRDIQLILANPGPLVIGKLHLSHFADMLGQDNIYLTVADAVEAC 645          
BLAST of CN189357 vs. ExPASy Swiss-Prot
Match: SUT13_ARATH (Sulfate transporter 1.3 OS=Arabidopsis thaliana GN=SULTR1;3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.521e-13
Identity = 36/78 (46.15%), Postives = 56/78 (71.79%), Query Frame = -2
Query:  342 LHYVILDMGAVGNIDTSGISMLEEVKKTLDRRELKLVLANPGAEVTKKLDKSKFIENMGQEWIYLTVGEAVTACNFRL 575
            + ++I++M  V +IDTSGI  LE++ K+L +R+++LVLANPG  V  KL  S F + +G + I+LTV EAV +C+ +L
Sbjct:  575 IQFLIIEMSPVTDIDTSGIHALEDLYKSLQKRDIQLVLANPGPPVINKLHVSHFADLIGHDKIFLTVAEAVDSCSPKL 652          
BLAST of CN189357 vs. ExPASy Swiss-Prot
Match: SUT35_ARATH (Probable sulfate transporter 3.5 OS=Arabidopsis thaliana GN=SULTR3;5 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.517e-13
Identity = 31/87 (35.63%), Postives = 58/87 (66.67%), Query Frame = -2
Query:  327 EESSLHYVILDMGAVGNIDTSGISMLEEVKKTLDRRELKLVLANPGAEVTKKLDKSKFIENMGQEWIYLTVGEAVTACNFRLHTCEP 587
            E  ++ +++LD+  V  ID +G+  L E+++ L  + +K+V+ NP  EV +K+  S F+E +G+E+++L++ +AV AC F L T +P
Sbjct:  546 EPEAIEFLLLDLSGVSTIDMTGMETLLEIQRILGSKNIKMVIINPRFEVLEKMMLSHFVEKIGKEYMFLSIDDAVQACRFNLTTTKP 632          
BLAST of CN189357 vs. ExPASy Swiss-Prot
Match: SUT1_STYHA (High affinity sulfate transporter 1 OS=Stylosanthes hamata GN=ST1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.897e-12
Identity = 37/76 (48.68%), Postives = 53/76 (69.74%), Query Frame = -2
Query:  363 SEESSLHYVILDMGAVGNIDTSGISMLEEVKKTLDRRELKLVLANPGAEVTKKLDKSKFIENMGQEWIYLTVGEAV 590
            SE   + ++I +M  V +IDTSGI   EE+ KTL +RE++L+LANPG  V +KL  SK  E +G++ I+LTV +AV
Sbjct:  582 SELPEIQHLITEMSPVPDIDTSGIHAFEELYKTLQKREVQLILANPGPVVIEKLHASKLTELIGEDKIFLTVADAV 657          
BLAST of CN189357 vs. ExPASy Swiss-Prot
Match: SUT34_ARATH (Probable sulfate transporter 3.4 OS=Arabidopsis thaliana GN=SULTR3;4 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.478e-12
Identity = 37/73 (50.68%), Postives = 52/73 (71.23%), Query Frame = -2
Query:  363 SSLHYVILDMGAVGNIDTSGISMLEEVKKTLDRRELKLVLANPGAEVTKKLDKSKFIENMGQEWIYLTVGEAV 581
            ++L  +ILDM AV  IDTSG+  + E+++ L+++ L+LVL NP   V +KL KSK IE +G   +YLTVGEAV
Sbjct:  568 TTLKCIILDMTAVSAIDTSGLEAVFELRRRLEKQSLQLVLVNPVGTVMEKLHKSKIIEALGLSGLYLTVGEAV 640          
BLAST of CN189357 vs. ExPASy Swiss-Prot
Match: SUT2_STYHA (High affinity sulfate transporter 2 OS=Stylosanthes hamata GN=ST2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.210e-12
Identity = 36/76 (47.37%), Postives = 53/76 (69.74%), Query Frame = -2
Query:  363 SEESSLHYVILDMGAVGNIDTSGISMLEEVKKTLDRRELKLVLANPGAEVTKKLDKSKFIENMGQEWIYLTVGEAV 590
            SE   + ++I++M  V +IDTSGI   EE+ KTL +RE++L+LANPG  V +KL  S   E +G++ I+LTV +AV
Sbjct:  577 SELPEIQHLIVEMSPVTDIDTSGIHAFEELYKTLQKREVQLMLANPGPVVIEKLHASNLAELIGEDKIFLTVADAV 652          
BLAST of CN189357 vs. ExPASy Swiss-Prot
Match: SUT33_ARATH (Probable sulfate transporter 3.3 OS=Arabidopsis thaliana GN=SULTR3;3 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 33/82 (40.24%), Postives = 58/82 (70.73%), Query Frame = -2
Query:  345 EESSLHYVILDMGAVGNIDTSGISMLEEVKKTLDRRELKLVLANPGAEVTKKLDKS-KFIENMGQEWIYLTVGEAVTACNFR 587
            + SSL ++IL+M AV  +DT+G+S  +E+KKT  +++++LV  NP +EV +KL ++ +  E M  E+++LTV EAV + + +
Sbjct:  543 KHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTAKKDIELVFVNPLSEVVEKLQRADEQKEFMRPEFLFLTVAEAVASLSLK 624          
The following BLAST results are available for this feature:
BLAST of CN189357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
SUT32_ARATH8.478e-2970.79Sulfate transporter 3.2 OS=Arabidopsis thaliana GN... [more]
SUT31_ARATH8.478e-2962.75Sulfate transporter 3.1 OS=Arabidopsis thaliana GN... [more]
SUT11_ARATH2.395e-1548.68Sulfate transporter 1.1 OS=Arabidopsis thaliana GN... [more]
SUT12_ARATH3.823e-1348.65Sulfate transporter 1.2 OS=Arabidopsis thaliana GN... [more]
SUT13_ARATH6.521e-1346.15Sulfate transporter 1.3 OS=Arabidopsis thaliana GN... [more]
SUT35_ARATH8.517e-1335.63Probable sulfate transporter 3.5 OS=Arabidopsis th... [more]
SUT1_STYHA1.897e-1248.68High affinity sulfate transporter 1 OS=Stylosanthe... [more]
SUT34_ARATH2.478e-1250.68Probable sulfate transporter 3.4 OS=Arabidopsis th... [more]
SUT2_STYHA7.210e-1247.37High affinity sulfate transporter 2 OS=Stylosanthe... [more]
SUT33_ARATH6.104e-1140.24Probable sulfate transporter 3.3 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0001L17_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001L17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189357 ID=CN189357; Name=CN189357; organism=Citrus sinensis; type=EST; length=594bp
TTTTTTTTTTTTTTTTTGATGAAGCAAATAGCAATCTGCCAAAATTTGGC
ATATGACTTCTATTATTGTACAATACATAGTGTTGGAAGGAGAAAAATAC
CTCCAACTTCAATATAACATTATAACATCAACCTCAAACTAAATGTGACT
CGTCACTGTTTAGTTAATTCCGATGCATACATTATGTTGCATCATAATTA
CATCAAGCGACAGAGACATAGTTTCCCTAGAATAGATAAAAAGTAATTGA
GCGATTGCAGAGAAAAGTAATGTTAAATATGGATTTATACGTTGTCACAT
GGCTCTGATTCTGCTTTCTCAGGATTTGGTTCGCAAGTATGAAGCCTGAA
ATTGCATGCTGTAACAGCCTCCCCTACTGTCAGATATATCCATTCTTGGC
CCATATTTTCAATGAACTTGGATTTGTCAAGCTTCTTCGTCACCTCAGCT
CCAGGATTTGCTAGCACAAGCTTGAGCTCTCTTCTATCAAGAGTTTTCTT
AACTTCCTCAAGCATGCTGATGCCACTAGTGTCAATGTTACCAACAGCGC
CCATATCCAGTATAACATAGTGTAAGCTGGATTCCTCTGAAGCT
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