CN189355

Overview
NameCN189355
Unique NameCN189355
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4427 contig Csv1_Contig4427:10..674. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189355 vs. ExPASy Swiss-Prot
Match: QORX_HUMAN (Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP53I3 PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.736e-39
Identity = 84/186 (45.16%), Postives = 116/186 (62.37%), Query Frame = 1
Query:  100 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 654
            M A+   +PG PE L ++EV  P   + EVL+KV A+ALNRAD +QR+G Y PP GAS   GLE SG +  +G      WK+GD   ALL GGG A+ V VP G ++P+P G++L  AAA PE   T +  + +  ++  G+  L+H G SG+GT AIQ+ +  G    VTAGS++KL + + LGA
Sbjct:    1 MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGA 186          
BLAST of CN189355 vs. ExPASy Swiss-Prot
Match: QOR_MOUSE (Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.278e-23
Identity = 71/178 (39.89%), Postives = 98/178 (55.06%), Query Frame = 1
Query:  100 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 624
            M+AI + + G PEVL+LQ +V  P  +  +VLIKV A  +N  +T  R G+Y   K A PY PG + +G I SVG  VS +K GD+V C     GGYAE        + P+P  ++ +  AA      T    +F ++    GES LVHG S G+G    Q+ +  G++V  TAGSEE
Sbjct:    8 MRAIRVFEFGGPEVLKLQSDVVVPVPQSHQVLIKVHACGVNPVETYIRSGAYSR-KPALPYTPGSDVAGIIESVGDKVSAFKKGDRVFCYSTVSGGYAEFALAADDTIYPLPETLNFRQGAALGIPYFTACRALFHSARARAGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEE 184          
BLAST of CN189355 vs. ExPASy Swiss-Prot
Match: QOR_BOVIN (Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.075e-23
Identity = 72/188 (38.30%), Postives = 104/188 (55.32%), Query Frame = 1
Query:  100 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 654
            M+AI + + G PEVL+LQ +V  P  KD +VLIKV+A  +N  DT  R G++   K   PY PG + +G I +VG++VS +K GD+V       GGYAE        V  +P  +  K  AA      T +  +  ++ + PGES LVHG S G+G  A Q+ +  G++V  TA +EE   +  + GA
Sbjct:    8 MRAIRVFEFGGPEVLKLQSDVAVPIPKDHQVLIKVQACGVNPVDTYIRSGTHNI-KPLLPYTPGFDVAGIIEAVGESVSAFKKGDRVFTTRTISGGYAEYALAADHTVYTLPEKLDFKQGAAIGIPYFTAYRALLHSACVKPGESVLVHGASGGVGIAACQIARAYGLKVLGTASTEEGQKIVLENGA 194          
BLAST of CN189355 vs. ExPASy Swiss-Prot
Match: QOR_RAT (Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.629e-23
Identity = 71/178 (39.89%), Postives = 96/178 (53.93%), Query Frame = 1
Query:  100 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 624
            M+AI + + G PEVL+LQ +V  P  +  +VLIKV A  +N  +T  R G+Y   K A PY PG + +G I SVG  VS +K GD+V C     GGYAE          P+P  +  +  AA      T    +F ++    GES LVHG S G+G    Q+ +  G++V  TAGSEE
Sbjct:    8 MRAIRVFEFGGPEVLKLQSDVVVPAPQSHQVLIKVHACGVNPVETYIRSGTYSR-KPALPYTPGSDVAGIIESVGDGVSAFKKGDRVFCFSTVSGGYAEFALSADNTTYPLPETLDFRQGAALGIPYFTACRALFHSARARAGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEE 184          
BLAST of CN189355 vs. ExPASy Swiss-Prot
Match: QOR_PONAB (Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.629e-23
Identity = 70/188 (37.23%), Postives = 101/188 (53.72%), Query Frame = 1
Query:  100 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 654
            M+A+ + + G PEVL+LQ ++  P  KD + LIKV A  +N  +T  R G+Y   K   PY PG + +G I +VG N S +K GD+V  +    GGYAE        V  +P  +  K  AA      T +  +  ++H+  GES LVHG S G+G  A Q+ +  G++V  TAG+EE   +    GA
Sbjct:    8 MRAVRVFEFGGPEVLKLQSDIAVPIPKDHQALIKVHACGVNPVETYIRSGTYSR-KPLLPYTPGSDVAGVIEAVGGNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSAHVKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQKIVLQNGA 194          
BLAST of CN189355 vs. ExPASy Swiss-Prot
Match: VAT1_DANRE (Synaptic vesicle membrane protein VAT-1 homolog OS=Danio rerio GN=vat1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.929e-22
Identity = 66/182 (36.26%), Postives = 99/182 (54.40%), Query Frame = 1
Query:   85 ESEGTMKAIVITQPGSPEVLQLQEVED-PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEE 624
            E   T +A+V+T  G  + ++LQ  +  P +K  EV+++V+   LN AD + R+G Y         PG+ECSG I +VG+ V+  KVGD+V  L   G + E V V +     +P G+S ++AAA P    T +  +F   HL P +S LVH  + G+G  A Q+ K    V VF TA + +
Sbjct:   66 EDTFTYRALVLTGYGGYDKVKLQVKKGKPALKSGEVMVRVKMCGLNFADLMARQGLYDRLPSPPVTPGMECSGVIEAVGEEVTDRKVGDKVLVLNRSGMWQEVVVVASTHTFLMPEGMSFEEAAALPVNYITAYMMLFDFGHLRPNQSVLVHMAAGGVGIAATQLCKTVNDVTVFGTASASK 247          
BLAST of CN189355 vs. ExPASy Swiss-Prot
Match: QOR_CAVPO (Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.329e-22
Identity = 68/187 (36.36%), Postives = 97/187 (51.87%), Query Frame = 1
Query:  100 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 654
            M+AI + + G PEVL++Q +V  P  KD +VLIKV A  +N  +T  R G+Y         PG + +G + S+G +VS +K GD+V       GGYAE        V  +P  +  +  AA      T    +F ++    GES LVHG S G+G  A Q+ +  G++V  TAG+EE   V    GA
Sbjct:    8 MRAIRVFEFGGPEVLKVQSDVAVPIPKDHQVLIKVHACGINPVETYIRSGTYTRIPLLPYTPGTDVAGVVESIGNDVSAFKKGDRVFTTSTISGGYAEYALASDHTVYRLPEKLDFRQGAAIGIPYFTACRALFHSARAKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQKVVLQNGA 194          
BLAST of CN189355 vs. ExPASy Swiss-Prot
Match: QOR_HUMAN (Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.250e-21
Identity = 68/188 (36.17%), Postives = 101/188 (53.72%), Query Frame = 1
Query:  100 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 654
            M+A+ + + G PEVL+L+ ++  P  KD +VLIKV A  +N  +T  R G+Y   K   PY PG + +G I +VG N S +K GD+V  +    GGYAE        V  +P  +  K  AA      T +  +  ++ +  GES LVHG S G+G  A Q+ +  G+++  TAG+EE   +    GA
Sbjct:    8 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGA 194          
BLAST of CN189355 vs. ExPASy Swiss-Prot
Match: QOR_PIG (Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.637e-21
Identity = 69/188 (36.70%), Postives = 102/188 (54.26%), Query Frame = 1
Query:  100 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 654
            M AI + + G PEV++LQ +V  P  KD++VLIKV A  +N  DT  R G++   K   PY PGL+ +G + +VG++VS +K GD+V  +    GGYAE        V  +P  +  K  AA      T    +  ++ +  GE  L+HG S G+G  A Q+ +  G++V  TAG+EE   +    GA
Sbjct:    8 MSAIRVFKFGGPEVMKLQSDVAIPIPKDNQVLIKVHACGVNPVDTYIRSGTHNM-KPLLPYTPGLDVAGIVEAVGEHVSSFKKGDRVFTVSTLSGGYAEYALAADDTVYMLPEKLDFKQGAAIGIPYFTACLALLHSACVKAGEIVLIHGASGGVGIAACQIARAYGLKVLGTAGTEEGQNIVLQNGA 194          
BLAST of CN189355 vs. ExPASy Swiss-Prot
Match: QOR_LAMGU (Quinone oxidoreductase OS=Lama guanicoe GN=CRYZ PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.750e-21
Identity = 71/188 (37.77%), Postives = 101/188 (53.72%), Query Frame = 1
Query:  100 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 654
            M+AI +++ G PEVL+LQ +V  P  ++ +VLIKV+A  +N  DT  R G+Y   K   PY PGL+ +G I +VG+ VS +K GD+V       GGYAE        V  +P  +  +  AA      T +  +  ++    GES LVHG S G+G  A Q+ +    +V  TAG+EE   V    GA
Sbjct:    8 MRAIRVSEFGGPEVLKLQSDVAVPIPEEHQVLIKVQACGVNPVDTYIRSGTYSR-KPRLPYTPGLDVAGLIEAVGERVSAFKKGDRVFTTSTVSGGYAEYALAADHTVYKLPGELDFQKGAAIGVPYFTAYRALLHSACAKAGESVLVHGASGGVGLAACQIARACCFKVLGTAGTEEGQRVVLQNGA 194          
The following BLAST results are available for this feature:
BLAST of CN189355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
QORX_HUMAN1.736e-3945.16Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP5... [more]
QOR_MOUSE2.278e-2339.89Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=... [more]
QOR_BOVIN5.075e-2338.30Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2[more]
QOR_RAT6.629e-2339.89Quinone oxidoreductase OS=Rattus norvegicus GN=Cry... [more]
QOR_PONAB6.629e-2337.23Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=... [more]
VAT1_DANRE1.929e-2236.26Synaptic vesicle membrane protein VAT-1 homolog OS... [more]
QOR_CAVPO7.329e-2236.36Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ ... [more]
QOR_HUMAN1.250e-2136.17Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=... [more]
QOR_PIG3.637e-2136.70Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 ... [more]
QOR_LAMGU4.750e-2137.77Quinone oxidoreductase OS=Lama guanicoe GN=CRYZ PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001L15_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189355 ID=CN189355; Name=CN189355; organism=Citrus sinensis; type=EST; length=665bp
CCGTAAAGGGCAAATGGGAAAAACATCATCATTTGCATTAGCTTTGTATA
AATAAATATTTTGGAATCATTTAATTCTACTCTGGAAAGTGAAGGCACAA
TGAAGGCAATAGTGATAACTCAACCCGGTAGCCCAGAAGTGCTGCAGTTG
CAAGAAGTAGAAGACCCTCAAATCAAAGACGACGAAGTGTTGATCAAAGT
CGAAGCTACTGCCCTGAACCGGGCCGACACTCTTCAACGAAAAGGCTCCT
ACCCTCCACCCAAAGGCGCCAGCCCTTACCCGGGTCTCGAATGTTCCGGA
ACCATCCTGTCCGTTGGTAAAAACGTCTCTAGATGGAAAGTCGGCGACCA
GGTGTGTGCTCTGCTTGGTGGAGGAGGGTATGCTGAGAAAGTGGCTGTTC
CAGCTGGACAAGTTCTTCCCGTTCCATCTGGTGTCTCACTCAAAGATGCT
GCTGCGTTTCCGGAGGTGGCTTGCACTGTTTGGTCAACGGTTTTCATGAC
CAGTCACCTATCCCCAGGGGAGTCATTTCTGGTTCATGGGGGCTCTAGTG
GAATTGGTACATTTGCGATTCAGATGGGAAAATGCCAAGGAGTGAGAGTC
TTTGTTACAGCAGGAAGTGAGGAAAAGCTGGCTGTTTGCAAGGATCTTGG
TGCGGATGTGTGCAT
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