CN189348

Overview
NameCN189348
Unique NameCN189348
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length651
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5386 contig Csv1_Contig5386:39..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 7.218e-107
Identity = 181/203 (89.16%), Postives = 194/203 (95.57%), Query Frame = 1
Query:   43 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            MS TAGQVIRC+AAVAWEAGKPLVIEEVEVAPPQ NEVR+KILFTSLCHTDVYFWEAKGQ PLFPRI+GHEAGGIVESVGEGVTDL+ GDHVLPVFTGECK+C HC SEESNMCDLLRINTDRGVM++DG+SRFSIKGKPIYHFVGTSTFSEYTV HVGC+AKINP+APLDKVC+LSCGISTG GAT+NVAKPKKG TVA+FG
Sbjct:    1 MSNTAGQVIRCRAAVAWEAGKPLVIEEVEVAPPQANEVRIKILFTSLCHTDVYFWEAKGQNPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKDCAHCKSEESNMCDLLRINTDRGVMLSDGKSRFSIKGKPIYHFVGTSTFSEYTVVHVGCLAKINPSAPLDKVCLLSCGISTGLGATLNVAKPKKGSTVAVFG 203          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 379.407 bits (973), Expect = 8.823e-105
Identity = 182/202 (90.10%), Postives = 189/202 (93.56%), Query Frame = 1
Query:   46 SGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            S TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQK EVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDL+PGDHVLPVFTGEC++C HC SEESNMCDLLRINTDRGVMI+DGQ+RFS  GKPIYHFVGTSTFSEYTV H GCV KI+P APLDKVCVLSCGISTG GAT+NVAKP KG TVAIFG
Sbjct:    3 SNTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLRINTDRGVMIHDGQTRFSKDGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSCGISTGLGATLNVAKPTKGSTVAIFG 204          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 379.022 bits (972), Expect = 1.152e-104
Identity = 181/200 (90.50%), Postives = 187/200 (93.50%), Query Frame = 1
Query:   52 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            TAG+VI+CKAAVAWEA KPLVIEEVEVAPPQ  EVR+KILFTSLCHTDVYFWEAKGQTP+FPRIFGHEAGGIVESVGEGVTDL PGDHVLPVFTGECKEC HC S ESNMCDLLRINTDRGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINPAAPLDKVCVLSCGISTG GAT+NVAKP KG TVAIFG
Sbjct:    3 TAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFG 202          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 379.022 bits (972), Expect = 1.152e-104
Identity = 181/200 (90.50%), Postives = 187/200 (93.50%), Query Frame = 1
Query:   52 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            TAG+VI+CKAAVAWEA KPLVIEEVEVAPPQ  EVR+KILFTSLCHTDVYFWEAKGQTP+FPRIFGHEAGGIVESVGEGVTDL PGDHVLPVFTGECKEC HC S ESNMCDLLRINTDRGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINPAAPLDKVCVLSCGISTG GAT+NVAKP KG TVAIFG
Sbjct:    3 TAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFG 202          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH1_ARATH (Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2)

HSP 1 Score: 377.867 bits (969), Expect = 2.567e-104
Identity = 177/200 (88.50%), Postives = 190/200 (95.00%), Query Frame = 1
Query:   52 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            T GQ+IRCKAAVAWEAGKPLVIEEVEVAPPQK+EVR+KILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLP+FTGEC EC HCHSEESNMCDLLRINT+RG MI+DG+SRFSI GKPIYHF+GTSTFSEYTV H G VAKINP APLDKVC++SCG+STG GAT+NVAKPKKGQ+VAIFG
Sbjct:    3 TTGQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTERGGMIHDGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLSTGLGATLNVAKPKKGQSVAIFG 202          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 5.719e-104
Identity = 178/203 (87.68%), Postives = 188/203 (92.61%), Query Frame = 1
Query:   43 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            MS TAGQVI+C+AAVAWEAGKPLVIEEVEVAPPQ  EVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVT L+PGDH LPVFTGEC ECPHC SEESNMC+LLRINTDRGVMIND +SRFSIKG+P++HFVGTSTFSEYTV H GCVAKINP APLDKVC+LSCGI TG GATVNVAKPK G +VAIFG
Sbjct:    1 MSNTAGQVIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCNLLRINTDRGVMINDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATVNVAKPKPGSSVAIFG 203          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 9.755e-104
Identity = 179/203 (88.18%), Postives = 187/203 (92.12%), Query Frame = 1
Query:   43 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            MS T GQVIRCKAAVAWEAGKPLV+EEV+VAPPQK EVRLKIL+TSLCHTDVYFWEAKGQ P+FPRI GHEA GIVESVGEGVT+L PGDHVLPVFTGECK+C HC SEESNMC LLRINTDRGVMINDGQSRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGISTG GAT+NVAKP KG +VAIFG
Sbjct:    1 MSTTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFG 203          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 9.755e-104
Identity = 179/203 (88.18%), Postives = 187/203 (92.12%), Query Frame = 1
Query:   43 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            MS T GQVIRCKAAVAWEAGKPLV+EEV+VAPPQK EVRLKIL+TSLCHTDVYFWEAKGQ P+FPRI GHEA GIVESVGEGVT+L PGDHVLPVFTGECK+C HC SEESNMC LLRINTDRGVMINDGQSRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGISTG GAT+NVAKP KG +VAIFG
Sbjct:    1 MSTTTGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFG 203          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 375.555 bits (963), Expect = 1.274e-103
Identity = 179/203 (88.18%), Postives = 187/203 (92.12%), Query Frame = 1
Query:   43 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            MS T GQVIRCKAAVAWEAGKPLV+EEV+VAPPQK EVRLKIL+TSLCHTDVYFWEAKGQ P+FPRI GHEA GIVESVGEGVT+L PGDHVLPVFTGECK+C HC SEESNMC LLRINTDRGVMINDGQSRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGISTG GAT+NVAKP KG +VAIFG
Sbjct:    1 MSTTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELGPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFG 203          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 375.555 bits (963), Expect = 1.274e-103
Identity = 175/203 (86.21%), Postives = 187/203 (92.12%), Query Frame = 1
Query:   43 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            MS T GQ+I+C+AAVAWEAGKPLVIEEVEVAPPQ  EVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVT L+PGDH LPVFTGEC ECPHC SEESNMCDLLRINTDRGVM+ND +SRFSIKG+P++HFVGTSTFSEYTV H GCVAKINP APLDKVC+LSCGI TG GAT+NVAKPK G +VAIFG
Sbjct:    1 MSNTVGQIIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMLNDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATINVAKPKPGSSVAIFG 203          
The following BLAST results are available for this feature:
BLAST of CN189348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
ADH_MALDO7.218e-10789.16Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADH1_PETHY8.823e-10590.10Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH1_ORYSJ1.152e-10490.50Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI1.152e-10490.50Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADH1_ARATH2.567e-10488.50Alcohol dehydrogenase class-P OS=Arabidopsis thali... [more]
ADH1_TRIRP5.719e-10487.68Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
ADH3_SOLTU9.755e-10488.18Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU9.755e-10488.18Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH1_SOLTU1.274e-10388.18Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH1_PEA1.274e-10386.21Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001L11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001L11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189348 ID=CN189348; Name=CN189348; organism=Citrus sinensis; type=EST; length=651bp
CTTATTTTACAGGTGTTGAGAGTATCATCATTCATCATCACCATGTCTGG
CACAGCTGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCATGGGAGGCGG
GGAAGCCACTAGTGATTGAAGAAGTGGAGGTGGCTCCACCACAGAAAAAT
GAAGTTCGATTGAAGATCCTCTTCACCTCTTTATGCCATACTGATGTTTA
CTTCTGGGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCATTTTTGGTC
ATGAAGCTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTAACTGATCTC
CAACCAGGAGACCATGTTCTTCCTGTATTCACAGGAGAGTGCAAGGAATG
TCCTCACTGTCATTCAGAGGAAAGCAATATGTGTGACCTCCTCCGGATCA
ATACTGACAGGGGTGTTATGATTAATGATGGTCAGTCAAGGTTCTCGATT
AAGGGGAAGCCAATTTACCATTTTGTGGGCACTTCTACCTTCAGTGAATA
CACTGTTACCCACGTCGGTTGTGTTGCTAAGATCAATCCTGCTGCCCCTC
TTGACAAAGTTTGTGTACTCAGCTGCGGAATCTCCACAGGTTTTGGGGCT
ACTGTTAATGTTGCCAAACCGAAGAAAGGCCAGACTGTTGCCATTTTTGG
A
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