CN189347

Overview
NameCN189347
Unique NameCN189347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3018 contig Csv1_Contig3018:40..621. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189347 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.597e-39
Identity = 75/86 (87.21%), Postives = 81/86 (94.19%), Query Frame = -1
Query:  324 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 581
            VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKP+SD+PSVV+KYM KE+ELEKFITH VPFSEINKAFD ML GESIRC+I M+
Sbjct:  296 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFITHQVPFSEINKAFDYMLKGESIRCMITME 381          
BLAST of CN189347 vs. ExPASy Swiss-Prot
Match: ADH1_ARATH (Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 2.507e-38
Identity = 74/85 (87.06%), Postives = 79/85 (92.94%), Query Frame = -1
Query:  327 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 581
            VLVGVP+KDDAFKTHPMN LNERTLKGTFFGNYKP++D+P VVEKYMNKE+ELEKFITH VPFSEINKAFD ML GESIRCII M
Sbjct:  293 VLVGVPSKDDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINKAFDYMLKGESIRCIITM 377          
BLAST of CN189347 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 9.527e-38
Identity = 73/86 (84.88%), Postives = 80/86 (93.02%), Query Frame = -1
Query:  324 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 581
            VLVGVP+KDDAFKTHPMN LNERTLKGTF+GNYKPR+DLP+VVEKYM  E+ELEKFITH VPFSEINKAFD ML GESIRCII+M+
Sbjct:  294 VLVGVPSKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITHTVPFSEINKAFDYMLKGESIRCIIKME 379          
BLAST of CN189347 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.625e-37
Identity = 72/86 (83.72%), Postives = 80/86 (93.02%), Query Frame = -1
Query:  324 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 581
            VLVGVP KDDAFKTHPMN LNERTLKGTF+GNYKPR+DLP+VVE+YM  E+ELEKFITH++PFSEINKAFD ML GESIRCIIRM+
Sbjct:  294 VLVGVPKKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEQYMKGELELEKFITHSIPFSEINKAFDYMLKGESIRCIIRME 379          
BLAST of CN189347 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.625e-37
Identity = 72/86 (83.72%), Postives = 80/86 (93.02%), Query Frame = -1
Query:  324 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 581
            VLVGVP+K+  FKTHPMNLLNERTLKGTFFGNYKPRSD+PSVVEKYMNKE+ELEKFITH +PF+EINKAFDLML GE +RCII M+
Sbjct:  294 VLVGVPHKEAVFKTHPMNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          
BLAST of CN189347 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 2.772e-37
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = -1
Query:  324 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 581
            VLVGVP KDD FKTHPMN LNE+TLKGTFFGNYKPR+DLP+VVE YM KE+ELEKFITH+VPFSEIN AFDLML GES+RC++RMD
Sbjct:  293 VLVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRMD 378          
BLAST of CN189347 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.772e-37
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = -1
Query:  324 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 581
            VLVGVP KDD FKTHPMN LNE+TLKGTFFGNYKPR+DLP+VVE YM KE+ELEKFITH+VPFSEIN AFDLML GES+RC++RMD
Sbjct:  293 VLVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRMD 378          
BLAST of CN189347 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.728e-37
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = -1
Query:  324 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 581
            VLVGVP+K+  FKTHPMN LNERTLKGTFFGNYKPRSD+PSVVEKYMNKE+ELEKFITH +PF+EINKAFDLML GE +RCII M+
Sbjct:  294 VLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          
BLAST of CN189347 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.728e-37
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = -1
Query:  324 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 581
            VLVGVP+K+  FKTHPMN LNERTLKGTFFGNYKPRSD+PSVVEKYMNKE+ELEKFITH +PF+EINKAFDLML GE +RCII M+
Sbjct:  294 VLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          
BLAST of CN189347 vs. ExPASy Swiss-Prot
Match: ADH2_MAIZE (Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.797e-36
Identity = 70/86 (81.40%), Postives = 80/86 (93.02%), Query Frame = -1
Query:  324 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 581
            VLVGVP+KDD FKTHPMN L+E+TLKGTFFGNYKPR+DLP+VVE YM KE+ELEKFITH+VPFSEIN AFDLML GES+RCI+RM+
Sbjct:  293 VLVGVPHKDDQFKTHPMNFLSEKTLKGTFFGNYKPRTDLPNVVEMYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCIMRME 378          
The following BLAST results are available for this feature:
BLAST of CN189347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
ADH1_PETHY6.597e-3987.21Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH1_ARATH2.507e-3887.06Alcohol dehydrogenase class-P OS=Arabidopsis thali... [more]
ADH1_PEA9.527e-3884.88Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH1_TRIRP1.625e-3783.72Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
ADH1_SOLTU1.625e-3783.72Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH2_ORYSJ2.772e-3782.56Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI2.772e-3782.56Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]
ADH3_SOLTU4.728e-3782.56Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU4.728e-3782.56Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH2_MAIZE1.797e-3681.40Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001L11_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001L11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189347 ID=CN189347; Name=CN189347; organism=Citrus sinensis; type=EST; length=581bp
TTTTTTTTTTTTTTTTTAAAGAAAGAAGATTTACACGAAAATCTTTATTA
CATAAGCTACAAAAAGAAGTACAGTAAGAAATAGGTCGAAAACACACCTC
TTTGTACGCCATATGCAGCAAGTCATCAAACAGAAAAACAAAAATAAAAA
GGGACTGTAAGAAATATGTAGAAAACACAACTCTTTGAAAGCCATTCGCA
GCAAGTCATCAAACATACAGCATAAATTACTTATTCTCGGGGTAATATAT
AACTTGGAAAATTATGTGATCATCTTCATTCTGCCTCCATTAGATTGATC
AGCAACAGCAGACACATCTAACCATCCATGCGAATGATGCACCTAATGCT
TTCTCCCGAAAGCATGAGGTCAAATGCCTTGTTTATCTCCGAGAAGGGCA
CAGCATGAGTGATGAATTTCTCAAGCTCCATCTCCTTGTTCATGTATTTT
TCAACAACTGAAGGAAGATCAGAGCGAGGTTTGTAGTTGCCAAAAAAGGT
ACCCTTAAGAGTCCTCTCATTAAGCAGATTCATGGGATGAGTCTTGAATG
CATCATCTTTGTTTGGCACACCCACAAGCAC
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