CN189313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH7_ARATH (Cell division protease ftsH homolog 7, chloroplastic OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1) HSP 1 Score: 337.035 bits (863), Expect = 6.895e-92 Identity = 179/228 (78.51%), Postives = 194/228 (85.09%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTP-ANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSALEVALCVVRANPDVLEGLGACXXXXXXXXXXXXXXWLGMVVAPIELSNFVAGRQEVLPP 684 AGIEKK+A+LKG+EKAVVARHEAGHAVVGTAVA+LL GQPRVEKLSILPRTGGALGFTY P +EDRYLLFIDEL GRLVTLLGGRAAEEV YSGRISTGA DDIRRATDMAYKA+AEYGLN+ IGPVS+ATLS GGID+SGG PWGRDQG+LVDLVQ+EV LLQSAL+VAL VVRANPDVLEGLGA WL MVVAP EL+ FV G+QE+L P Sbjct: 570 AGIEKKSARLKGNEKAVVARHEAGHAVVGTAVANLLTGQPRVEKLSILPRTGGALGFTYIPPTSEDRYLLFIDELLGRLVTLLGGRAAEEVVYSGRISTGAFDDIRRATDMAYKAVAEYGLNQKIGPVSVATLSGGGIDDSGGS-PWGRDQGKLVDLVQKEVTILLQSALDVALSVVRANPDVLEGLGAQLEEKEKVEGEELQKWLSMVVAPEELAVFVEGKQELLLP 796
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH7_ORYSJ (Cell division protease ftsH homolog 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1) HSP 1 Score: 333.569 bits (854), Expect = 7.624e-91 Identity = 175/224 (78.12%), Postives = 191/224 (85.27%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTP-ANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSALEVALCVVRANPDVLEGLGACXXXXXXXXXXXXXXWLGMVVAPIELSNFVAGRQE 672 AGIEKK AKLKG+EKAVVARHE GHAVVGTAVA+LLPGQPRVEKLSILPR+GGALGFTYTP EDRYLLF+DEL GRLVTLLGGRAAEEV SGR+STGALDDIRRATDMAYKA+AEYGLN+ IGP+S+ATLS+GG+DESGG PWGRDQG LVDLVQREVKALLQSAL+VAL VVRANP VLEGLGA WL VVAP EL++F+ G+QE Sbjct: 591 AGIEKKHAKLKGNEKAVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYTPPTTEDRYLLFVDELRGRLVTLLGGRAAEEVVLSGRVSTGALDDIRRATDMAYKAVAEYGLNQRIGPISVATLSNGGLDESGGS-PWGRDQGHLVDLVQREVKALLQSALDVALSVVRANPTVLEGLGAYLEENEKVEGEELQEWLKSVVAPKELTSFIRGKQE 813
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH9_ARATH (Cell division protease ftsH homolog 9, chloroplastic OS=Arabidopsis thaliana GN=FTSH9 PE=2 SV=1) HSP 1 Score: 327.02 bits (837), Expect = 7.136e-89 Identity = 177/228 (77.63%), Postives = 188/228 (82.46%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTP-ANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSALEVALCVVRANPDVLEGLGACXXXXXXXXXXXXXXWLGMVVAPIELSNFVAGRQEVLPP 684 AGIEKKTA+LKGSEKAVVARHEAGHAVVGTAVASLL GQ RVEKLSILPR+GGALGFTY P +EDRYLLFIDEL GRLVTLLGGRAAEEV YSGRISTGALDDIRRATDMAYKA+AEYGLN IGPVS+ATLS+GGID+SGG PWGRDQG LVDLVQREV LLQSAL+VAL VVRANPDVLEGLGA WL VV EL+ F+ G+Q L P Sbjct: 574 AGIEKKTARLKGSEKAVVARHEAGHAVVGTAVASLLSGQSRVEKLSILPRSGGALGFTYIPPTHEDRYLLFIDELHGRLVTLLGGRAAEEVVYSGRISTGALDDIRRATDMAYKAVAEYGLNEKIGPVSVATLSAGGIDDSGGS-PWGRDQGHLVDLVQREVTNLLQSALDVALTVVRANPDVLEGLGAQLEDEEKVEGEELQKWLNRVVPSEELAVFIKGKQTALLP 800
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH3_SYNY3 (Cell division protease ftsH homolog 3 OS=Synechocystis sp. (strain PCC 6803) GN=sll1463 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.184e-29 Identity = 77/211 (36.49%), Postives = 114/211 (54.03%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSALEVALCVVRANPDVLEGLGACXXXXXXXXXXXXXXWLGMVVAP 636 AG+EKK+ L EK +VA HE GHA+VG +++PG +V K+SI+PR ALG+T EDR+LL EL ++ TLLGGRAAEE+ + I+TGA +D++RATD+A + + YG+++ +GP++ G G P + EVK +++ AL ++ N D+LE + LG V AP Sbjct: 418 AGLEKKSRVLSDKEKKIVAYHEVGHALVG----AVMPGGGQVAKISIVPRGMAALGYTLQMPTEDRFLLNESELRDQIATLLGGRAAEEIVFDS-ITTGAANDLQRATDLAEQMVTTYGMSKVLGPLAYDKGQQNNFLGQGMGNPRRMVSDDTAKEIDLEVKEIVEQGHNQALAILEHNRDLLEAIAEKILEKEVIEGEELHHLLGQVQAP 623
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.676e-21 Identity = 71/187 (37.97%), Postives = 99/187 (52.94%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRD---QGQLVDLVQREVKALLQSALEVALCVVRANPDVLE 555 AG KK+ + EK +VA HEAGH VVG L V K++I+PR G A G+ EDRY + EL +++ LLGGR AEEV + G +STGA +D +RAT +A K + EYG++ +GP+ I SGG V GRD + D + E+ +Q ++ C R +LE Sbjct: 408 AGPAKKSRVISPKEKKIVAWHEAGHTVVGVK----LENADMVHKVTIVPR-GMAGGYAVMLPKEDRYFMTQPELLDKIIGLLGGRVAEEVTF-GEVSTGAHNDFQRATGIARKMVTEYGMSEKLGPMQF-------ISGSGGQVFLGRDIQNEQNYSDAIAHEIDLEVQRIIKE--CYARCKQILLE 579
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: SPG7_MOUSE (Paraplegin OS=Mus musculus GN=Spg7 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.733e-21 Identity = 73/188 (38.83%), Postives = 104/188 (55.32%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSG--GIDESGGGVPWGRDQGQLVDLVQREVKALLQSALEVALCVVRANPDVLEGL 561 AG KK+ L E+ VVA HE+GHA+VG LL V K+SI PRT ALGF+ D+YL ++L R+ LGGRAAE +++S R+++GA DD+R+ T +AY + ++G+ +IGPVS G GI G P+ + Q++D E K L+ A V+ N D L+ L Sbjct: 554 AGTAKKSKILSKEEQRVVAFHESGHALVGW----LLEHTEAVMKVSIAPRTNAALGFSQM-LPRDQYLFTKEQLFERMCMALGGRAAEAISFS-RVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPVSFPEAQEGLMGI----GRRPFSQGLQQMMD---HEAKLLVAKAYRHTEKVLLDNLDKLQAL 728
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_HELFE (Cell division protease ftsH homolog OS=Helicobacter felis GN=ftsH PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.368e-21 Identity = 63/170 (37.06%), Postives = 97/170 (57.06%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSALE 513 AG+EKK+ ++ EK +VA HE+GHAV+ + + G RV K+SI+PR ALG+T E++YL+ EL + LLGGRAAE+V + ISTGA +D+ RATD+ ++ YG++ G + L GGG GR + + + E+ + +++ LE Sbjct: 420 AGLEKKSRRISPKEKKIVAYHESGHAVI----SEMTKGSARVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVLLGGRAAEDV-FLQEISTGASNDLERATDIIKGMVSYYGMSDVSG---LMVLEKQRNSFLGGGFGSGR---EFSEKMAEEMDSFIKNLLE 578
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_HELPJ (Cell division protease ftsH homolog OS=Helicobacter pylori J99 GN=ftsH PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.086e-20 Identity = 55/125 (44.00%), Postives = 79/125 (63.20%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIG 378 AG+EKK+ ++ EK +VA HE+GHAV+ + + G RV K+SI+PR ALG+T E++YL+ EL + LLGGRAAEEV + ISTGA +D+ RATD+ ++ YG++ G Sbjct: 414 AGLEKKSRRISPKEKKIVAYHESGHAVI----SEMTKGSTRVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVLLGGRAAEEV-FLEEISTGASNDLERATDIIKGMVSYYGMSSVSG 533
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: FTSH_TREPA (Cell division protease ftsH homolog OS=Treponema pallidum GN=ftsH PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.419e-20 Identity = 60/183 (32.79%), Postives = 99/183 (54.10%), Query Frame = 1 Query: 7 GIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSALEVALCVVRANPDVLE 555 G++KK+ ++ E+ ++A HE GHA+ GT G +V K++I+PR ALG+T+ +DR+++ +L + LL GRAAE VA+ G +STGA +DI RATD+ K I +YG++ V++ +G + E + Q VD EV +L + ++ ++LE Sbjct: 383 GLQKKSRVIREEERRIIAYHETGHALAGT----FTKGADKVHKITIIPRGTSALGYTFHIPEDDRHIVTEQQLLAEVDVLLSGRAAEFVAF-GEVSTGAGNDISRATDIVRKMITDYGMSEKFQNVALTRRGTGYLAEPQLAREYSECTQQYVD---EEVARVLAERYRAVVALLTEKKELLE 557
BLAST of CN189313 vs. ExPASy Swiss-Prot
Match: SPG7_RAT (Paraplegin OS=Rattus norvegicus GN=Spg7 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.420e-20 Identity = 69/186 (37.10%), Postives = 103/186 (55.38%), Query Frame = 1 Query: 4 AGIEKKTAKLKGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRTGGALGFTYTPANEDRYLLFIDELCGRLVTLLGGRAAEEVAYSGRISTGALDDIRRATDMAYKAIAEYGLNRTIGPVSIATLSSGGIDESGGGVPWGRDQGQLVDLVQREVKALLQSALEVALCVVRANPDVLEGL 561 +G KK+ L E+ VVA HE+GHA+VG LL V K+SI PRT ALGF+ D+YL ++L R+ LGGRAAE +++S R+++GA DD+R+ T +AY + ++G+ +IGPVS G + G P+ + Q++D E + L+ A V+ N D L+ L Sbjct: 517 SGTAKKSKILSKEEQRVVAFHESGHALVGW----LLEHTEAVMKVSIAPRTNAALGFSQM-LPRDQYLFTKEQLFERMCMALGGRAAEAISFS-RVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPVSFPEAQEGLV--GIGRRPFSQGLQQMMD---HEARLLVARAYRHTEKVLLDNLDKLQAL 691 The following BLAST results are available for this feature:
BLAST of CN189313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189313 ID=CN189313; Name=CN189313; organism=Citrus sinensis; type=EST; length=784bpback to top |