EY676443

Overview
NameEY676443
Unique NameEY676443
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length986
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676443 vs. ExPASy Swiss-Prot
Match: GAE1_ARATH (UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 2.576e-66
Identity = 96/117 (82.05%), Postives = 110/117 (94.02%), Query Frame = 2
Query:   23 ADPWVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVW 373
            A  +VG+HVSLAL+KRGDGVVGLDNFNNYYDPSLK+AR++LL++ GIFV+EGD+NDAKLLAKLFD VAFTHVMHLAAQAGVRYA++NP SYVHSNIAGLV LLE CK+ANPQP+IVW
Sbjct:   95 ATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQPAIVW 211          

HSP 2 Score: 70.4774 bits (171), Expect = 2.576e-66
Identity = 49/91 (53.85%), Postives = 57/91 (62.64%), Query Frame = 1
Query:  388 SVYGLNENVPFSEADRTDQPASLYAATKKAGEKICSTPSNPV*GPPHIPGLRVFHRWTDPGGPTQKLALPSPSTKKIFSKGKPNHRFYRGK 660
            SVYGLNE VPFSE+DRTDQPASLYAATKKAGE+I  T  N + G   I GLR F  +    GP  +  +   S  +   +GKP    YRGK
Sbjct:  216 SVYGLNEKVPFSESDRTDQPASLYAATKKAGEEITHT-YNHIYGLA-ITGLRFFTVY----GPWGRPDMAYFSFTRNILQGKP-ITIYRGK 299          
BLAST of EY676443 vs. ExPASy Swiss-Prot
Match: GAE3_ARATH (UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 2.328e-61
Identity = 91/114 (79.82%), Postives = 102/114 (89.47%), Query Frame = 2
Query:   32 WVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVW 373
            +VGTHVS ALK+RGDGV+GLDNFN+YYDPSLK+AR+ALL   G+FV+EGDINDA LL KLF+ V FTHVMHLAAQAGVRYAM+NP SYVHSNIAG V LLE CKSANPQP+IVW
Sbjct:  101 FVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPAIVW 214          

HSP 2 Score: 64.6994 bits (156), Expect = 2.328e-61
Identity = 39/63 (61.90%), Postives = 43/63 (68.25%), Query Frame = 1
Query:  388 SVYGLNENVPFSEADRTDQPASLYAATKKAGEKICSTPSNPV*GPPHIPGLRVFHRWTDPGGP 576
            SVYGLN  VPFSE DRTDQPASLYAATKKAGE+I  T  N + G   + GLR F  +   G P
Sbjct:  219 SVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHT-YNHIYG-LSLTGLRFFTVYGPWGRP 279          
BLAST of EY676443 vs. ExPASy Swiss-Prot
Match: GAE4_ARATH (UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 2.535e-60
Identity = 89/114 (78.07%), Postives = 101/114 (88.60%), Query Frame = 2
Query:   32 WVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVW 373
            +VGTHVS ALK+RGDGV+GLDNFN+YYDPSLK+AR+ALL   GIF++EGDIND +LL KLF  V+FTHVMHLAAQAGVRYAM+NP SYVHSNIAG V LLE CKS NPQP+IVW
Sbjct:  107 FVGTHVSAALKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVW 220          

HSP 2 Score: 63.5438 bits (153), Expect = 2.535e-60
Identity = 38/63 (60.32%), Postives = 43/63 (68.25%), Query Frame = 1
Query:  388 SVYGLNENVPFSEADRTDQPASLYAATKKAGEKICSTPSNPV*GPPHIPGLRVFHRWTDPGGP 576
            SVYGLN  VPFSE D+TDQPASLYAATKKAGE+I  T  N + G   + GLR F  +   G P
Sbjct:  225 SVYGLNTKVPFSEKDKTDQPASLYAATKKAGEEIAHT-YNHIYG-LSLTGLRFFTVYGPWGRP 285          
BLAST of EY676443 vs. ExPASy Swiss-Prot
Match: GAE2_ARATH (UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 2.117e-59
Identity = 87/114 (76.32%), Postives = 100/114 (87.72%), Query Frame = 2
Query:   32 WVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVW 373
            +VGTHVS ALK+RGDGV+GLDNFN+YYD SLK++R+ALL   G+F++EGDIND  LL KLF+ V FTHVMHLAAQAGVRYAM+NP SYVHSNIAG V LLE CKSANPQP+IVW
Sbjct:  102 FVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVW 215          

HSP 2 Score: 64.6994 bits (156), Expect = 2.117e-59
Identity = 39/63 (61.90%), Postives = 43/63 (68.25%), Query Frame = 1
Query:  388 SVYGLNENVPFSEADRTDQPASLYAATKKAGEKICSTPSNPV*GPPHIPGLRVFHRWTDPGGP 576
            SVYGLN  VPFSE DRTDQPASLYAATKKAGE+I  T  N + G   + GLR F  +   G P
Sbjct:  220 SVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHT-YNHIYG-LSLTGLRFFTVYGPWGRP 280          
BLAST of EY676443 vs. ExPASy Swiss-Prot
Match: GAE5_ARATH (UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana GN=GAE5 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 6.118e-59
Identity = 89/117 (76.07%), Postives = 100/117 (85.47%), Query Frame = 2
Query:   23 ADPWVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVW 373
            A  +VGTHVS+AL++RGDGV+GLDNFN YYDP LK+AR+ LL   G+FV+EGDINDA LL KLFD V FTHVMHLAAQAGVRYAMQNP SYV+SNIAG V LLE  KSANPQP+IVW
Sbjct:  103 ASGFVGTHVSIALRRRGDGVLGLDNFNRYYDPKLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVW 219          

HSP 2 Score: 63.929 bits (154), Expect = 6.118e-59
Identity = 39/63 (61.90%), Postives = 42/63 (66.67%), Query Frame = 1
Query:  388 SVYGLNENVPFSEADRTDQPASLYAATKKAGEKICSTPSNPV*GPPHIPGLRVFHRWTDPGGP 576
            SVYGLN  VPFSE DRTDQPASLYAATKKAGE I  T  N + G   + GLR F  +   G P
Sbjct:  224 SVYGLNSKVPFSEKDRTDQPASLYAATKKAGEGIAHT-YNHIYG-LSLTGLRFFTVYGPWGRP 284          
BLAST of EY676443 vs. ExPASy Swiss-Prot
Match: GAE6_ARATH (UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.483e-54
Identity = 79/114 (69.30%), Postives = 96/114 (84.21%), Query Frame = 2
Query:   32 WVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVW 373
            +VG+H SLAL+KRGDGV+G DNFN+YYDPSLK+AR+ LL    +F++EGD+ND  LL KLFD V FTH++HLAAQAGVRYAM+NP SY+ SNIAG V LLE  K+ANPQP+IVW
Sbjct:  122 FVGSHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEGDLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQPAIVW 235          

HSP 2 Score: 59.3066 bits (142), Expect = 5.483e-54
Identity = 37/63 (58.73%), Postives = 41/63 (65.08%), Query Frame = 1
Query:  388 SVYGLNENVPFSEADRTDQPASLYAATKKAGEKICSTPSNPV*GPPHIPGLRVFHRWTDPGGP 576
            SVYGLN   PFSE  RTDQPASLYAATKKAGE+I  T  N + G   + GLR F  +   G P
Sbjct:  240 SVYGLNTENPFSEEHRTDQPASLYAATKKAGEEIAHT-YNHIYG-LSLTGLRFFTVYGPWGRP 300          
BLAST of EY676443 vs. ExPASy Swiss-Prot
Match: YCL2_ECO11 (Uncharacterized 37.6 kDa protein in cld 5'region OS=Escherichia coli O111:H- PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.076e-24
Identity = 42/104 (40.38%), Postives = 62/104 (59.62%), Query Frame = 2
Query:   32 WVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACK 343
            ++G HVS  L + G  VVG+DN N+YYD SLK+AR  LL   G    + D+ D + +  LF +  F  V     +  VRY+++NPH+Y  SN+ G + +LE C+
Sbjct:   11 FIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQARLELLAQPGFQFHKIDLADREGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFLNILEGCR 114          

HSP 2 Score: 50.8322 bits (120), Expect = 3.076e-24
Identity = 33/67 (49.25%), Postives = 38/67 (56.72%), Query Frame = 1
Query:  388 SVYGLNENVPFSEADRTDQPASLYAATKKAGEKICSTPSNPV*GPPHIPGLRVFHRWTDPGGPTQKL 588
            SVYGLN  +PFS  D  D P SLYAATKKA E +  T S+ + G P   GLR F  +   G P   L
Sbjct:  128 SVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSH-LYGLP-ATGLRFFTVYGPWGRPDMAL 192          
BLAST of EY676443 vs. ExPASy Swiss-Prot
Match: LPSL_RHIME (UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti GN=lspL PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 5.952e-22
Identity = 40/110 (36.36%), Postives = 63/110 (57.27%), Query Frame = 2
Query:   32 WVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLN-NHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 358
            ++G HV+  L   G  VVG D    YYD +LK+ R A+L  ++G   +   + D   L +  +      ++HLAAQAGVRY+++NP +YV +N+ G   +LE  K+  P+
Sbjct:   11 FIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRSNGFKAVTAMLEDRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLVGSWNMLELAKAIAPK 120          

HSP 2 Score: 50.447 bits (119), Expect = 5.952e-22
Identity = 21/32 (65.62%), Postives = 27/32 (84.38%), Query Frame = 1
Query:  388 SVYGLNENVPFSEADRTDQPASLYAATKKAGE 483
            S+YG NE +PF+EADR D+P +LYAATKK+ E
Sbjct:  129 SIYGANEKIPFAEADRADEPMTLYAATKKSME 160          
BLAST of EY676443 vs. ExPASy Swiss-Prot
Match: CAPI_STAAU (Protein capI OS=Staphylococcus aureus GN=capI PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.267e-21
Identity = 39/109 (35.78%), Postives = 66/109 (60.55%), Query Frame = 2
Query:   32 WVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 358
            ++G+H++  L K+G  V+G+D+ N+YY  SLK+ R   +        +  + +   L+K+F       V++LAAQAGVRY+++NP +Y+ SNI G + +LE  +  N Q
Sbjct:   11 FIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDRLKSIGKENFTFNKVKLENYDDLSKVFVDEQPEVVVNLAAQAGVRYSIENPRTYIDSNIVGFMNILECSRHFNIQ 119          

HSP 2 Score: 46.9802 bits (110), Expect = 8.267e-21
Identity = 30/67 (44.78%), Postives = 36/67 (53.73%), Query Frame = 1
Query:  388 SVYGLNENVPFSEADRTDQPASLYAATKKAGEKICSTPSNPV*GPPHIPGLRVFHRWTDPGGPTQKL 588
            SVYG N + PFS +D  D P SLYAATKK+ E +  T S+    P    GLR F  +   G P   L
Sbjct:  128 SVYGANTSKPFSTSDNIDHPLSLYAATKKSNELMAHTYSHLYNLP--TTGLRFFTVYGPWGRPDMAL 192          
BLAST of EY676443 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.939e-19
Identity = 39/104 (37.50%), Postives = 61/104 (58.65%), Query Frame = 2
Query:   32 WVGTHVSLALKKRGDG--VVGLDNFNNYYDPSLKKARKALLNNHGIFV-IEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLE 334
            ++G H+S  L    +   V+G+DN NNYY+P LK+ R  +L N+  +  I+ D +D   L +         ++HL AQAGVRY++QNP +Y+ SN  G + + E
Sbjct:   14 FIGFHLSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNEILKNYENYTFIKLDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFE 117          

HSP 2 Score: 46.2098 bits (108), Expect = 1.939e-19
Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 1
Query:  388 SVYGLNENVPFSEADRTDQPASLYAATKKAGE 483
            SVYG N  +PFSE DR D+P SLYA+TK++ E
Sbjct:  134 SVYGGNRKIPFSEDDRVDKPISLYASTKRSNE 165          
The following BLAST results are available for this feature:
BLAST of EY676443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
GAE1_ARATH2.576e-6682.05UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thali... [more]
GAE3_ARATH2.328e-6179.82UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thali... [more]
GAE4_ARATH2.535e-6078.07UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thali... [more]
GAE2_ARATH2.117e-5976.32UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thali... [more]
GAE5_ARATH6.118e-5976.07UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thali... [more]
GAE6_ARATH5.483e-5469.30UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thali... [more]
YCL2_ECO113.076e-2440.38Uncharacterized 37.6 kDa protein in cld 5'region O... [more]
LPSL_RHIME5.952e-2236.36UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti... [more]
CAPI_STAAU8.267e-2135.78Protein capI OS=Staphylococcus aureus GN=capI PE=3... [more]
Y1055_METJA1.939e-1937.50Uncharacterized protein MJ1055 OS=Methanocaldococc... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-022-G03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676443 ID=EY676443; Name=EY676443; organism=Citrus sinensis; type=EST; length=986bp
CCACGCGTCCGCGGACGCGTGGGCGGACCCGTGGGTTGGGACCCACGTGT
CTTTGGCTTTAAAGAAACGCGGAGACGGCGTCGTTGGACTCGACAATTTC
AATAACTACTACGATCCCTCATTGAAGAAGGCGAGGAAGGCTTTGTTGAA
CAACCATGGCATTTTTGTAATTGAAGGTGATATCAATGACGCGAAATTAT
TAGCCAAGCTCTTTGACGCTGTGGCTTTTACGCACGTGATGCATTTAGCG
GCTCAAGCCGGTGTTAGATACGCGATGCAGAATCCCCACTCGTACGTGCA
CAGCAATATCGCTGGCCTCGTCACGCTCCTTGAGGCTTGCAAATCAGCCA
ATCCTCAGCCGTCGATTGTGTGGGGCCTCGTCGAGGCTCCGTCTACGGCT
TAAACGAGAACGTCCCATTCTCCGAGGCTGATCGGACGGACCAGCCAGCA
AGTCTTTACGCGGCTACCAAAAAGGCCGGGGAAAAAATTTGCTCCACACC
CTCCAATCCCGTTTAAGGGCCTCCTCATATACCGGGGCTGAGGGTTTTTC
ACCGGTGGACGGACCCCGGGGGCCCAACCCAAAAATTGGCTTTACCTTCC
CCTTCCACAAAAAAAATATTCTCCAAAGGCAAACCCAATCACCGGTTTTA
TCGGGGGAAAAAAATTCCCTTCCAAAATTGGGCCCAAAGAATTTATTCCT
TACATATATAAACAAAATCCCGAAAAAGGGCATTTAAAAAGCCCCCCCCG
GAAAACCTCCCCCAGGAGAACAAATATCCCAGGGGCTCGGGCAGGAAAAA
AAAAGAGGGGGGGGCCCCCCACTCACCCTAACTCCCAGAAATTTCTTTTA
AATCTTTAGGAGGAAACACTTCCTCATCCCCCCGCTATTCTCCACGAGGA
CTCTCCCCCGATATCCCTGGCGGGGTGAAAAATATACAAATATAAGCTAC
AAAACATACAGCAACCCCCCCGCGAAAGAGCAACAG
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