CN189296

Overview
NameCN189296
Unique NameCN189296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:11..791. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 399.823 bits (1026), Expect = 8.603e-111
Identity = 200/231 (86.58%), Postives = 209/231 (90.48%), Query Frame = 2
Query:   77 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGHYP 769
            MEGKEEDVRLGANKF+ERQPIGTAAQ  D KDY EPPPAPLFEPGELKSWSFYRAGIAEF+ATFLFLYI+VLTVMGV  S +KC+TVGIQGIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLV L   P
Sbjct:    1 MEGKEEDVRLGANKFSERQPIGTAAQGSDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVNNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQ-KGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP 230          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 3.614e-109
Identity = 197/232 (84.91%), Postives = 210/232 (90.52%), Query Frame = 2
Query:   77 MEGKEEDVRLGANKFAERQPIGTAAQ-TQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGHYP 769
            MEGKEEDVRLGANKF+ERQPIGTAAQ   D KDY EPPPAPLFEPGELKSWSFYRAGIAEF+ATFLFLYI++LTVMGV KS +KC+TVGIQGIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRALFY++MQCLGA+CGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLV L   P
Sbjct:    1 MEGKEEDVRLGANKFSERQPIGTAAQGAADDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQ-QGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP 231          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 1.052e-108
Identity = 198/235 (84.26%), Postives = 210/235 (89.36%), Query Frame = 2
Query:   77 MEGKEEDVRLGANKFAERQPIGTAAQT----QDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGHYP 769
            MEGKEEDVRLGANKF+ERQPIGTAAQ      D KDY EPPPAPLFEPGELKSWSFYRAGIAEF+ATFLFLYI+VLTVMGV KS +KC+TVGIQGIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FY++MQCLGAICGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLV L   P
Sbjct:    1 MEGKEEDVRLGANKFSERQPIGTAAQGAGAGDDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQ-QGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP 234          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 1.373e-108
Identity = 196/232 (84.48%), Postives = 211/232 (90.95%), Query Frame = 2
Query:   77 MEGKEEDVRLGANKFAERQPIGTAAQ-TQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGHYP 769
            MEGKEEDVRLGAN+++ERQPIGTAAQ   D KDY EPPPAPLFEPGELKSWSFYRAGIAEF+ATFLFLYI++LTVMGV KS++KC+TVGIQGIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FY+VMQCLGAICGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLV L   P
Sbjct:    1 MEGKEEDVRLGANRYSERQPIGTAAQGAGDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQ-QGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP 231          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 389.037 bits (998), Expect = 1.519e-107
Identity = 195/232 (84.05%), Postives = 207/232 (89.22%), Query Frame = 2
Query:   77 MEGKEEDVRLGANKFAERQPIGTAAQTQDG-KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGHYP 769
            ME KE+DV LGANKF ERQP+G AAQ+QD  KDY EPPPAPLFEP EL SWSFYRAGIAEFIATFLFLYI+VLTVMGVV+ ++KC TVGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FYMVMQ LGAICGAGVVKGF G  ++G L GGAN VA GYTKGDGLGAEI+GTF+LVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV L   P
Sbjct:    1 MEAKEQDVSLGANKFPERQPLGIAAQSQDEPKDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIP 232          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 389.037 bits (998), Expect = 1.519e-107
Identity = 196/231 (84.85%), Postives = 206/231 (89.18%), Query Frame = 2
Query:   77 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGHYP 769
            MEGKEEDV +GANKF ERQPIGTAAQT+  KDY EPPPAP FEPGELKSWSFYRAGIAEFIATFLFLY++VLTVMGV ++   C++VGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRALFY+VMQCLGAICGAGVVKGF   G Y    GGANVVAHGYTKG GLGAEI+GTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV L   P
Sbjct:    1 MEGKEEDVNVGANKFPERQPIGTAAQTES-KDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQ-PGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIP 229          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 1.983e-107
Identity = 196/231 (84.85%), Postives = 206/231 (89.18%), Query Frame = 2
Query:   77 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGHYP 769
            MEGKEEDVR+GANKF ERQPIGT+AQ+ D KDY EPPPAPLFEPGEL SWSFYRAGIAEFIATFLFLYI+VLTVMGV ++   C++VGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FYM+MQCLGAICGAGVVKGF     Y  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV L   P
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSTD-KDYKEPPPAPLFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPT-PYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIP 229          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 387.882 bits (995), Expect = 3.383e-107
Identity = 195/231 (84.42%), Postives = 206/231 (89.18%), Query Frame = 2
Query:   77 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGHYP 769
            MEGKEEDVRLGAN+++ERQPIGTAAQ  + KDY EPPPAPLFE  EL SWSFYRAGIAEF+ATFLFLYIS+LTVMGV KS++KC+TVGIQGIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF   G Y    GGAN V  GYTKGDGLGAEI+GTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV L   P
Sbjct:    1 MEGKEEDVRLGANRYSERQPIGTAAQGTEEKDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQ-EGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIP 230          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 9.843e-107
Identity = 194/230 (84.35%), Postives = 207/230 (90.00%), Query Frame = 2
Query:   80 EGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGHYP 769
            E KEEDV+LGANKF E QP+GTAAQT   KDY EPPPAPLFEPGEL SWSFYRAGIAEF+ATFLFLYI++LTVMG+ +S++ CS+VGIQG+AWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FYMVMQCLGAICGAGVVKGFM  G Y RL GGANVV  GYTKGDGLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLV L   P
Sbjct:    3 ENKEEDVKLGANKFRETQPLGTAAQTD--KDYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLKRSDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFM-VGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP 229          
BLAST of CN189296 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 1.679e-106
Identity = 195/231 (84.42%), Postives = 204/231 (88.31%), Query Frame = 2
Query:   77 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVSLGHYP 769
            MEGKEEDVR+GANKF ERQPIGT+AQT   KDY EPPPAP FEPGEL SWSFYRAGIAEFIATFLFLYI+VLTVMGV ++   C++VGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FY+VMQCLGAICGAGVVKGF     Y  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV L   P
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQTD--KDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQ-PNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIP 228          
The following BLAST results are available for this feature:
BLAST of CN189296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
PIP12_ORYSJ8.603e-11186.58Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP12_MAIZE3.614e-10984.91Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP13_MAIZE1.052e-10884.26Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP11_ORYSJ1.373e-10884.48Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP2_PEA1.519e-10784.05Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP15_ARATH1.519e-10784.85Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP14_ARATH1.983e-10784.85Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP15_MAIZE3.383e-10784.42Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP1_SOLLC9.843e-10784.35Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP13_ARATH1.679e-10684.42Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K04_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189296 ID=CN189296; Name=CN189296; organism=Citrus sinensis; type=EST; length=782bp
GAGGCATCAAACGGCCACAAACAAAAAAGCAAGTGCTTCTTATTGACTAT
TTTGTGTTTTTGAGGGAGTAGCAGAAATGGAAGGCAAAGAAGAGGATGTT
AGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGACGGCGGC
TCAGACCCAAGATGGCAAGGACTACGTTGAACCCCCACCGGCGCCGCTCT
TCGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGGTATAGCC
GAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGACAGTGAT
GGGCGTCGTCAAGTCCAACACCAAGTGCTCAACCGTCGGCATTCAAGGGA
TTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTACTGCACAGCT
GGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCTGTTCTT
GGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTGATGCAGT
GTCTGGGAGCCATCTGCGGTGCTGGCGTTGTTAAGGGTTTCATGGGTGCC
GGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTCATGGCTA
CACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTGTTCTTG
TCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGCCAGGGACTCT
CATGTTCCTATTTTGGCTCCTCTGCCCATTGGGTTCGCTGTGTTTTTGGT
TTCACTTGGCCACTATCCCAATTACCGGAACT
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