CN189284

Overview
NameCN189284
Unique NameCN189284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2721 contig Csv1_Contig2721:1..735. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189284 vs. ExPASy Swiss-Prot
Match: HA22K_ARATH (HVA22-like protein k OS=Arabidopsis thaliana GN=HVA22K PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.466e-56
Identity = 107/187 (57.22%), Postives = 136/187 (72.73%), Query Frame = 1
Query:  151 LSGEVGLRLLLCPIGSNIVVRTACCSVGTILPVYSTFKAIESKDENEKQKWLVYWAVYGSFSIAEMFADKILCWFPLYHHVKFAFLVWLQLPSTNGAKYFYMSRLRPFLLRHQARLDQILESVNGEMSQFVSDHQVEFRFVRTLFMKTVALVNQTVKEIIHPVPTQANRAIEGPPESIPDSQSDNED 711
            L+GEVGLR+L  P+ SNIV+RTACCS+G  LPVYSTFKAIES DENE+QK L+YWA YGSFS+ E+F DKI+ WFPLY+HVKFAFLVWLQLP+  G+K  Y +++RPFLLRHQAR+DQ+++ V GEM + V  HQ E RFVR +  K +  VN+    +       AN +      S  +S S++ED
Sbjct:   18 LTGEVGLRVLFSPLSSNIVLRTACCSIGIGLPVYSTFKAIESGDENEQQKMLIYWAAYGSFSLVEVFTDKIISWFPLYYHVKFAFLVWLQLPTVEGSKQIYNNQIRPFLLRHQARVDQLVDGVYGEMVKVVRSHQGEIRFVRAMIAKILGSVNEDAPRL----GEIANGSPVSETNSDSESDSNHED 200          
BLAST of CN189284 vs. ExPASy Swiss-Prot
Match: REEP5_HUMAN (Receptor expression-enhancing protein 5 OS=Homo sapiens GN=REEP5 PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.972e-21
Identity = 52/140 (37.14%), Postives = 80/140 (57.14%), Query Frame = 1
Query:  121 RSFLRIELMALSGEVGLRLLLCPIGSNIVVRTACCSVGTILPVYSTFKAIESKDENEKQKWLVYWAVYGSFSIAEMFADKILCWFPLYHHVKFAFLVWLQLPS-TNGAKYFYMSRLRPFLLRHQARLDQILESVNGEMSQ 537
            RSF+ +      G +GL  L    G    +   C  +G   P Y + KAIES ++ +  +WL YW VYG FSIAE F+D  L WFP Y+ +K  FL+W   PS +NGA+  Y   +RPF L+H++++D +++ +  +  +
Sbjct:   34 RSFIAL------GVIGLVALYLVFGYGASL--LCNLIGFGYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIAEFFSDIFLSWFPFYYMLKCGFLLWCMAPSPSNGAELLYKRIIRPFFLKHESQMDSVVKDLKDKAKE 165          
BLAST of CN189284 vs. ExPASy Swiss-Prot
Match: REEP5_PONAB (Receptor expression-enhancing protein 5 OS=Pongo abelii GN=REEP5 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.576e-21
Identity = 52/140 (37.14%), Postives = 80/140 (57.14%), Query Frame = 1
Query:  121 RSFLRIELMALSGEVGLRLLLCPIGSNIVVRTACCSVGTILPVYSTFKAIESKDENEKQKWLVYWAVYGSFSIAEMFADKILCWFPLYHHVKFAFLVWLQLPS-TNGAKYFYMSRLRPFLLRHQARLDQILESVNGEMSQ 537
            RSF+ +      G +GL  L    G    +   C  +G   P Y + KAIES ++ +  +WL YW VYG FSIAE F+D  L WFP Y+ +K  FL+W   PS +NGA+  Y   +RPF L+H++++D +++ +  +  +
Sbjct:   34 RSFIAL------GVIGLVALYLVFGYGASL--LCNLIGFGYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIAEFFSDIFLSWFPFYYMLKCGFLLWCMAPSPSNGAELLYKRIIRPFFLKHESQVDSVVKDLKDKAKE 165          
BLAST of CN189284 vs. ExPASy Swiss-Prot
Match: REEP5_RAT (Receptor expression-enhancing protein 5 OS=Rattus norvegicus GN=Reep5 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.364e-21
Identity = 52/140 (37.14%), Postives = 80/140 (57.14%), Query Frame = 1
Query:  121 RSFLRIELMALSGEVGLRLLLCPIGSNIVVRTACCSVGTILPVYSTFKAIESKDENEKQKWLVYWAVYGSFSIAEMFADKILCWFPLYHHVKFAFLVWLQLPS-TNGAKYFYMSRLRPFLLRHQARLDQILESVNGEMSQ 537
            RSF+ +      G +GL  L    G    +   C  +G   P Y + KAIES ++++  +WL YW VYG FSIAE F+D  L WFP Y+ +K  FL+W   PS +NGA+  Y   +RP  L+H++++D +++ V  +  +
Sbjct:   34 RSFIAL------GVIGLVALYLVFGYGASL--LCNLIGFGYPAYISMKAIESPNKDDDTQWLTYWVVYGVFSIAEFFSDLFLSWFPFYYMLKCGFLLWCMAPSPSNGAELLYRRVIRPIFLKHESQVDSVVKDVKDKAKE 165          
BLAST of CN189284 vs. ExPASy Swiss-Prot
Match: REEP5_MOUSE (Receptor expression-enhancing protein 5 OS=Mus musculus GN=Reep5 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.787e-21
Identity = 52/140 (37.14%), Postives = 78/140 (55.71%), Query Frame = 1
Query:  121 RSFLRIELMALSGEVGLRLLLCPIGSNIVVRTACCSVGTILPVYSTFKAIESKDENEKQKWLVYWAVYGSFSIAEMFADKILCWFPLYHHVKFAFLVWLQLPS-TNGAKYFYMSRLRPFLLRHQARLDQILESVNGEMSQ 537
            RSF+ +      G +GL  L    G    +   C  +G   P Y + KAIES ++++  +WL YW VYG FSIAE F+D  L W P Y+ +K  FL+W   PS  NGA+  Y   +RP  LRH++++D +++ V  +  +
Sbjct:   30 RSFIAL------GVIGLVALYLVFGYGASL--LCNLIGFGYPAYISMKAIESPNKDDDTQWLTYWVVYGVFSIAEFFSDLFLSWLPFYYMLKCGFLLWCMAPSPANGAEMLYRRIIRPIFLRHESQVDSVVKDVKDKAKE 161          
BLAST of CN189284 vs. ExPASy Swiss-Prot
Match: REEP5_BOVIN (Receptor expression-enhancing protein 5 OS=Bos taurus GN=REEP5 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.278e-20
Identity = 51/140 (36.43%), Postives = 76/140 (54.29%), Query Frame = 1
Query:  121 RSFLRIELMALSGEVGLRLLLCPIGSNIVVRTACCSVGTILPVYSTFKAIESKDENEKQKWLVYWAVYGSFSIAEMFADKILCWFPLYHHVKFAFLVWLQLPS-TNGAKYFYMSRLRPFLLRHQARLDQILESVNGEMSQ 537
            RSF+ +      G +GL  L    G    +   C  +G   P Y + KAIES ++ +  +WL YW VYG FSI E F+D  L WFP Y+ +K  FL+W   PS  NGA   Y   +RPF L+H++++D ++  +  +  +
Sbjct:   34 RSFIAL------GVIGLLALYLVFGYGASL--LCNLIGFGYPAYVSIKAIESPNKEDDTQWLTYWVVYGVFSIVEFFSDLFLSWFPFYYMLKCGFLLWCMAPSPANGADLLYKRIIRPFFLKHESQVDNVVNDLKDKAKE 165          
BLAST of CN189284 vs. ExPASy Swiss-Prot
Match: REEP1_MOUSE (Receptor expression-enhancing protein 1 OS=Mus musculus GN=Reep1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.161e-19
Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = 1
Query:  202 IVVRTACCSVGTILPVYSTFKAIESKDENEKQKWLVYWAVYGSFSIAEMFADKILCWFPLYHHVKFAFLVWLQLPSTNGAKYFYMSRLRPFLLRHQARLDQIL 510
            I+ R      GT+ P Y ++KA++SKD  E  KW++YW ++  F+ AE F D  LCWFP Y+ +K AF+ WL  P T G+   Y   + P L   +  +D  L
Sbjct:    5 IISRLVVLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTTAETFTDIFLCWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCL 107          
BLAST of CN189284 vs. ExPASy Swiss-Prot
Match: REEP1_HUMAN (Receptor expression-enhancing protein 1 OS=Homo sapiens GN=REEP1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.161e-19
Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = 1
Query:  202 IVVRTACCSVGTILPVYSTFKAIESKDENEKQKWLVYWAVYGSFSIAEMFADKILCWFPLYHHVKFAFLVWLQLPSTNGAKYFYMSRLRPFLLRHQARLDQIL 510
            I+ R      GT+ P Y ++KA++SKD  E  KW++YW ++  F+ AE F D  LCWFP Y+ +K AF+ WL  P T G+   Y   + P L   +  +D  L
Sbjct:    5 IISRLVVLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTTAETFTDIFLCWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCL 107          
BLAST of CN189284 vs. ExPASy Swiss-Prot
Match: REEP6_BOVIN (Receptor expression-enhancing protein 6 OS=Bos taurus GN=REEP6 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 1
Query:  220 CCSVGTILPVYSTFKAIESKDENEKQKWLVYWAVYGSFSIAEMFADKILCWFPLYHHVKFAFLVWLQLPST-NGAKYFYMSRLRPFLLRHQARLDQILESVNG 525
            C  +G   P Y++ KAIES  + +   WL YW VYG F +AE F+D +L WFP Y+  K AFL++   P   NGA   Y   +RP  L+H   +D I+  ++G
Sbjct:   58 CSLIGFAYPAYASIKAIESPSKEDDTVWLTYWVVYGLFGLAEFFSDLLLSWFPFYYAGKCAFLLFCMAPGPWNGAHMLYHRIIRPLFLKHHEAVDSIVSDISG 160          
BLAST of CN189284 vs. ExPASy Swiss-Prot
Match: REEP6_HUMAN (Receptor expression-enhancing protein 6 OS=Homo sapiens GN=REEP6 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18
Identity = 42/103 (40.78%), Postives = 61/103 (59.22%), Query Frame = 1
Query:  220 CCSVGTILPVYSTFKAIESKDENEKQKWLVYWAVYGSFSIAEMFADKILCWFPLYHHVKFAFLVWLQLPST-NGAKYFYMSRLRPFLLRHQARLDQILESVNG 525
            C  +G + P Y++ KAIES  +++   WL YW VY  F +AE F+D +L WFP Y+  K AFL++   P   NGA   Y   +RP  LRH   +D+I+  ++G
Sbjct:   58 CNLIGFVYPAYASIKAIESPSKDDDTVWLTYWVVYALFGLAEFFSDLLLSWFPFYYVGKCAFLLFCMAPRPWNGALMLYQRVVRPLFLRHHGAVDRIMNDLSG 160          
The following BLAST results are available for this feature:
BLAST of CN189284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
HA22K_ARATH2.466e-5657.22HVA22-like protein k OS=Arabidopsis thaliana GN=HV... [more]
REEP5_HUMAN1.972e-2137.14Receptor expression-enhancing protein 5 OS=Homo sa... [more]
REEP5_PONAB2.576e-2137.14Receptor expression-enhancing protein 5 OS=Pongo a... [more]
REEP5_RAT3.364e-2137.14Receptor expression-enhancing protein 5 OS=Rattus ... [more]
REEP5_MOUSE9.787e-2137.14Receptor expression-enhancing protein 5 OS=Mus mus... [more]
REEP5_BOVIN1.278e-2036.43Receptor expression-enhancing protein 5 OS=Bos tau... [more]
REEP1_MOUSE9.161e-1938.83Receptor expression-enhancing protein 1 OS=Mus mus... [more]
REEP1_HUMAN9.161e-1938.83Receptor expression-enhancing protein 1 OS=Homo sa... [more]
REEP6_BOVIN1.563e-1840.78Receptor expression-enhancing protein 6 OS=Bos tau... [more]
REEP6_HUMAN2.041e-1840.78Receptor expression-enhancing protein 6 OS=Homo sa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J21_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189284 ID=CN189284; Name=CN189284; organism=Citrus sinensis; type=EST; length=735bp
AGGCACAACCCCGGTCGGGTGAAATTGAACCCGGTTCAAATTTCCACCCT
TGCGCATTGCGATCCGATCTCGACAAATGGCAACAATCAATCGCGGCCTT
CAAATCAAATCTTTTTGCTTCGCAGTTTTCTGCGTATTGAATTAATGGCT
CTCTCAGGCGAGGTTGGTTTGCGATTGCTTCTTTGCCCAATTGGCTCTAA
CATTGTTGTCCGCACAGCATGTTGTTCGGTTGGGACGATTTTGCCGGTTT
ACTCGACTTTTAAAGCTATTGAGAGCAAAGATGAAAATGAGAAACAAAAG
TGGCTTGTTTATTGGGCTGTTTATGGATCTTTTAGCATTGCGGAAATGTT
TGCTGACAAGATACTCTGCTGGTTTCCGCTTTACCACCATGTGAAGTTTG
CATTTCTGGTTTGGCTACAACTTCCATCTACCAATGGAGCGAAATATTTT
TATATGAGTCGTTTGCGCCCATTTCTATTGAGACATCAAGCTAGACTTGA
TCAAATACTGGAGTCTGTAAATGGTGAAATGAGTCAATTTGTCAGTGATC
ATCAAGTTGAATTCCGGTTTGTGAGGACGCTCTTTATGAAAACTGTGGCA
TTAGTGAACCAAACTGTTAAGGAGATTATTCATCCTGTGCCAACACAAGC
AAATCGAGCTATTGAAGGCCCACCAGAATCAATTCCAGATTCTCAGTCAG
ACAACGAAGACTGACAAATAGTTCCTAACAAGCAC
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