CN189276

Overview
NameCN189276
Unique NameCN189276
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig567 contig Csv1_Contig567:123..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189276 vs. ExPASy Swiss-Prot
Match: CYTI_VIGUN (Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.361e-23
Identity = 53/95 (55.79%), Postives = 67/95 (70.53%), Query Frame = 3
Query:    3 LATVGGVREVEATFNNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 287
            +A +GG R+V    N+ EI +LARFAV+EHNKKQN+ L+F            GTLY ITLEA +GGQKK++EAKVWEKPW+ FKEL+EF  V  +
Sbjct:    1 MAALGGNRDVAGNQNSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKKVYEAKVWEKPWLNFKELQEFKHVGDA 95          
BLAST of CN189276 vs. ExPASy Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 1.999e-22
Identity = 51/100 (51.00%), Postives = 69/100 (69.00%), Query Frame = 3
Query:    3 LATVGGVREVEATFNNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA 302
            +A VGGV +V A  N+ E+ +LARFAVDEHNKK+N+ L+F            GTL+ +TLE +E GQKKL+EAKVW KPW+ FKEL+EF   + + + T+
Sbjct:   34 MALVGGVGDVPANQNSGEVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKPASDAPAITS 133          
BLAST of CN189276 vs. ExPASy Swiss-Prot
Match: CYT3_ARATH (Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 6.019e-19
Identity = 45/86 (52.33%), Postives = 57/86 (66.28%), Query Frame = 3
Query:   12 VGGVREVEATFNNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEF 269
            +GGV ++    N+ EI +LARFA+ EHNK+QN  L+F            GT+Y +TLEA EG Q K FEAKVW KPWM FK+L+EF
Sbjct:   35 LGGVHDLRGNQNSGEIESLARFAIQEHNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEF 120          
BLAST of CN189276 vs. ExPASy Swiss-Prot
Match: CYT12_ORYSJ (Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.019e-19
Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 3
Query:   12 VGGVREVEATFNNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSST 299
            +GG  +  +  N+ E   LARFAVDEHNK++N+ L+F            GTL+ +TLEA+E G+KK++EAKVW KPW+ FKEL+EF     + + T
Sbjct:   48 LGGAHDAPSAANSVETDALARFAVDEHNKRENALLEFVRVVEAKEQVVAGTLHHLTLEALEAGRKKVYEAKVWVKPWLDFKELQEFRNTGDATTFT 143          
BLAST of CN189276 vs. ExPASy Swiss-Prot
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 7.861e-19
Identity = 50/92 (54.35%), Postives = 58/92 (63.04%), Query Frame = 3
Query:   12 VGGVREVEATFNNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 287
            +GGV  V    N+  +V+LARFAV EHNKK NS L+F            GTLY  T+E  EG  KKL+EAKVWEKPWM FKEL+EF  V  S
Sbjct:   47 LGGVEPV-GNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDAS 137          
BLAST of CN189276 vs. ExPASy Swiss-Prot
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.655e-18
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 3
Query:   15 GGVREVEATFNNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSS 296
            GG+++V A  N+ ++  LARFAV+EHN+K N+ L F            GT+Y +T+E  +G  KKL+EAKVWEKPW  FK+L+EF  V +  S+
Sbjct:   42 GGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPVEEGASA 135          
BLAST of CN189276 vs. ExPASy Swiss-Prot
Match: CYTA_HELAN (Cysteine proteinase inhibitor A OS=Helianthus annuus PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.634e-17
Identity = 44/75 (58.67%), Postives = 49/75 (65.33%), Query Frame = 3
Query:   54 EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTV 278
            EI  LARFAVDEHNKKQN+ L+F            G +Y ITLEA  GG KK +EAKVW KPW  FKEL+EF  V
Sbjct:    3 EIDELARFAVDEHNKKQNALLEFGKVVNTKEQVVAGKMYYITLEATNGGVKKTYEAKVWVKPWENFKELQEFKPV 77          
BLAST of CN189276 vs. ExPASy Swiss-Prot
Match: CYT7_ARATH (Cysteine proteinase inhibitor 7 OS=Arabidopsis thaliana GN=CYS7 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.388e-15
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 3
Query:   12 VGGVREVEATFNN-QEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 287
            +GG  + +  +N  +EI ++A FAV EHN+++N+ L+             G LY +TLE +E G+KK++EAKVW KPWM FK+L+EF  +  S
Sbjct:   45 LGGFSDSKNDWNGGKEIDDIALFAVQEHNRRENAVLELARVLKATEQVVAGKLYRLTLEVIEAGEKKIYEAKVWVKPWMNFKQLQEFKNIIPS 137          
BLAST of CN189276 vs. ExPASy Swiss-Prot
Match: CYT1_ARATH (Cysteine proteinase inhibitor 1 OS=Arabidopsis thaliana GN=CYS1 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.812e-15
Identity = 37/87 (42.53%), Postives = 56/87 (64.37%), Query Frame = 3
Query:   12 VGGVREVEATFNNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFN 272
            VGGVR+++A  N+ ++ +LARFAVDEHNK +N  L++            GT++ +T+E  +G   K++EAKV EK W   K+L+ FN
Sbjct:   10 VGGVRDIDANANDLQVESLARFAVDEHNKNENLTLEYKRLLGAKTQVVAGTMHHLTVEVADGETNKVYEAKVLEKAWENLKQLESFN 96          
BLAST of CN189276 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.273e-15
Identity = 42/91 (46.15%), Postives = 54/91 (59.34%), Query Frame = 3
Query:   12 VGGVREVEATFNNQ-EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVA 281
            +GGV++  A   N  E + LARFAV EHN K N+ L+F            G ++  T+E  EGG KKL+EAKVWEK W  FK+L+EF   A
Sbjct:   17 LGGVQDAPAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKPAA 107          
The following BLAST results are available for this feature:
BLAST of CN189276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CYTI_VIGUN2.361e-2355.79Cysteine proteinase inhibitor OS=Vigna unguiculata... [more]
CYT6_ARATH1.999e-2251.00Cysteine proteinase inhibitor 6 OS=Arabidopsis tha... [more]
CYT3_ARATH6.019e-1952.33Cysteine proteinase inhibitor 3 OS=Arabidopsis tha... [more]
CYT12_ORYSJ6.019e-1945.83Cysteine proteinase inhibitor 12 OS=Oryza sativa s... [more]
CYT1_ORYSJ7.861e-1954.35Cysteine proteinase inhibitor 1 OS=Oryza sativa su... [more]
CYT1_MAIZE6.655e-1845.74Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1[more]
CYTA_HELAN5.634e-1758.67Cysteine proteinase inhibitor A OS=Helianthus annu... [more]
CYT7_ARATH1.388e-1541.94Cysteine proteinase inhibitor 7 OS=Arabidopsis tha... [more]
CYT1_ARATH1.812e-1542.53Cysteine proteinase inhibitor 1 OS=Arabidopsis tha... [more]
CYT1_HORVU5.273e-1546.15Cysteine proteinase inhibitor OS=Hordeum vulgare G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J14_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189276 ID=CN189276; Name=CN189276; organism=Citrus sinensis; type=EST; length=591bp
ATTTGGCTACAGTAGGCGGTGTTCGTGAGGTTGAAGCAACCTTCAACAAT
CAGGAGATCGTTAATCTCGCACGCTTCGCTGTGGATGAGCATAACAAGAA
GCAGAATTCAAATCTGCAATTTGTAAAAGTTGTAAGTGCGAAGCAGCAAG
TGGTTTCAGGGACTCTGTACGACATCACCTTGGAGGCTGTTGAAGGAGGT
CAGAAGAAACTTTTTGAAGCTAAGGTCTGGGAGAAGCCTTGGATGCAATT
CAAGGAGTTGAAAGAATTCAATACTGTGGCTCAGTCTCACTCCTCAACCG
CTTAGCTTGTGGTGACTGAAGATGACATCTACGTGTAGCTTGCAATGGAT
CAAACAAAGAGACAGTATCAATAAGAATGGAGCTATAACCATGTTCAGAA
TATAAAAATAAATGTAACCGGATTTATGAGTTTGGTTCTTTAATCTTTTG
CAAGTTATGTGTCGATTATTTATGGTAGTAGCTGCAACTCAGCGCAACTT
TTATAACTGTGTGAAAAATAATTGAAATGACCTTTGGTCTGTAATATATA
TACAAGATTAATCTCTTTCTACTTTAAAAAAAAAAAAAAAA
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