CN189275

Overview
NameCN189275
Unique NameCN189275
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig567 contig Csv1_Contig567:123..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189275 vs. ExPASy Swiss-Prot
Match: CYTI_VIGUN (Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.808e-23
Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = -3
Query:  304 VATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 588
            +A +GG R+V    N+ EI +LARFAV+EHNKKQN+ L+F           SGTLY ITLEA +GGQKK++EAKVWEKPW+ FKEL+EF  V  +
Sbjct:    1 MAALGGNRDVAGNQNSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKKVYEAKVWEKPWLNFKELQEFKHVGDA 95          
BLAST of CN189275 vs. ExPASy Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.531e-22
Identity = 51/100 (51.00%), Postives = 70/100 (70.00%), Query Frame = -3
Query:  289 VATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA 588
            +A VGGV +V A  N+ E+ +LARFAVDEHNKK+N+ L+F           +GTL+ +TLE +E GQKKL+EAKVW KPW+ FKEL+EF   + + + T+
Sbjct:   34 MALVGGVGDVPANQNSGEVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKPASDAPAITS 133          
BLAST of CN189275 vs. ExPASy Swiss-Prot
Match: CYT12_ORYSJ (Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.213e-19
Identity = 45/96 (46.88%), Postives = 64/96 (66.67%), Query Frame = -3
Query:  292 VGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSST 579
            +GG  +  + AN+ E   LARFAVDEHNK++N+ L+F           +GTL+ +TLEA+E G+KK++EAKVW KPW+ FKEL+EF     + + T
Sbjct:   48 LGGAHDAPSAANSVETDALARFAVDEHNKRENALLEFVRVVEAKEQVVAGTLHHLTLEALEAGRKKVYEAKVWVKPWLDFKELQEFRNTGDATTFT 143          
BLAST of CN189275 vs. ExPASy Swiss-Prot
Match: CYT3_ARATH (Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 3.529e-19
Identity = 45/86 (52.33%), Postives = 58/86 (67.44%), Query Frame = -3
Query:  322 VGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEF 579
            +GGV ++    N+ EI +LARFA+ EHNK+QN  L+F           +GT+Y +TLEA EG Q K FEAKVW KPWM FK+L+EF
Sbjct:   35 LGGVHDLRGNQNSGEIESLARFAIQEHNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEF 120          
BLAST of CN189275 vs. ExPASy Swiss-Prot
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 4.609e-19
Identity = 50/92 (54.35%), Postives = 59/92 (64.13%), Query Frame = -3
Query:  304 VGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 579
            +GGV  V    N+  +V+LARFAV EHNKK NS L+F           +GTLY  T+E  EG  KKL+EAKVWEKPWM FKEL+EF  V  S
Sbjct:   47 LGGVEPV-GNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDAS 137          
BLAST of CN189275 vs. ExPASy Swiss-Prot
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.901e-18
Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = -3
Query:  295 GGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSS 576
            GG+++V A  N+ ++  LARFAV+EHN+K N+ L F           +GT+Y +T+E  +G  KKL+EAKVWEKPW  FK+L+EF  V +  S+
Sbjct:   42 GGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPVEEGASA 135          
BLAST of CN189275 vs. ExPASy Swiss-Prot
Match: CYTA_HELAN (Cysteine proteinase inhibitor A OS=Helianthus annuus PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.634e-17
Identity = 44/75 (58.67%), Postives = 50/75 (66.67%), Query Frame = -3
Query:  313 EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTV 537
            EI  LARFAVDEHNKKQN+ L+F           +G +Y ITLEA  GG KK +EAKVW KPW  FKEL+EF  V
Sbjct:    3 EIDELARFAVDEHNKKQNALLEFGKVVNTKEQVVAGKMYYITLEATNGGVKKTYEAKVWVKPWENFKELQEFKPV 77          
BLAST of CN189275 vs. ExPASy Swiss-Prot
Match: CYT1_ARATH (Cysteine proteinase inhibitor 1 OS=Arabidopsis thaliana GN=CYS1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 3.652e-16
Identity = 38/87 (43.68%), Postives = 58/87 (66.67%), Query Frame = -3
Query:  319 VGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFN 579
            VGGVR+++A AN+ ++ +LARFAVDEHNK +N  L++           +GT++ +T+E  +G   K++EAKV EK W   K+L+ FN
Sbjct:   10 VGGVRDIDANANDLQVESLARFAVDEHNKNENLTLEYKRLLGAKTQVVAGTMHHLTVEVADGETNKVYEAKVLEKAWENLKQLESFN 96          
BLAST of CN189275 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.091e-15
Identity = 42/91 (46.15%), Postives = 55/91 (60.44%), Query Frame = -3
Query:  310 VGGVREVEATANNQ-EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVA 579
            +GGV++  A   N  E + LARFAV EHN K N+ L+F           +G ++  T+E  EGG KKL+EAKVWEK W  FK+L+EF   A
Sbjct:   17 LGGVQDAPAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKPAA 107          
BLAST of CN189275 vs. ExPASy Swiss-Prot
Match: CYT7_ARATH (Cysteine proteinase inhibitor 7 OS=Arabidopsis thaliana GN=CYS7 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 4.037e-15
Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = -3
Query:  304 QEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 540
            +EI ++A FAV EHN+++N+ L+            +G LY +TLE +E G+KK++EAKVW KPWM FK+L+EF  +  S
Sbjct:   59 KEIDDIALFAVQEHNRRENAVLELARVLKATEQVVAGKLYRLTLEVIEAGEKKIYEAKVWVKPWMNFKQLQEFKNIIPS 137          
The following BLAST results are available for this feature:
BLAST of CN189275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CYTI_VIGUN1.808e-2356.84Cysteine proteinase inhibitor OS=Vigna unguiculata... [more]
CYT6_ARATH1.531e-2251.00Cysteine proteinase inhibitor 6 OS=Arabidopsis tha... [more]
CYT12_ORYSJ1.213e-1946.88Cysteine proteinase inhibitor 12 OS=Oryza sativa s... [more]
CYT3_ARATH3.529e-1952.33Cysteine proteinase inhibitor 3 OS=Arabidopsis tha... [more]
CYT1_ORYSJ4.609e-1954.35Cysteine proteinase inhibitor 1 OS=Oryza sativa su... [more]
CYT1_MAIZE3.901e-1845.74Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1[more]
CYTA_HELAN5.634e-1758.67Cysteine proteinase inhibitor A OS=Helianthus annu... [more]
CYT1_ARATH3.652e-1643.68Cysteine proteinase inhibitor 1 OS=Arabidopsis tha... [more]
CYT1_HORVU3.091e-1546.15Cysteine proteinase inhibitor OS=Hordeum vulgare G... [more]
CYT7_ARATH4.037e-1545.57Cysteine proteinase inhibitor 7 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J14_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189275 ID=CN189275; Name=CN189275; organism=Citrus sinensis; type=EST; length=590bp
TTTTTTTTTTTTTTTTAAGTAGAAAGAGATTAATCTTGTATATATATTAC
AGACCAAAGGTCATTTCAATTATTTTTCACACAGTTATAAAAGTTGCGCT
GAGTTGCAGCTACTACCATAAATAATCGACACATAACTTGCAAAAGATTA
AAGAACCAAACTCATAAATCCGGTTACATTTATTTTTATATTCTGAACAT
GGTTATAGCTCCATTCTTATTGATACTGTCTCTTTGTTTGATCCATTGCA
AGCTACACGTAGATGTCATCTTCAGTCACCACAAGCTAAGCGGTTGAGGA
GTGAGACTGAGCCACAGTATTGAATTCTTTCAACTCCTTGAATTGCATCC
AAGGCTTCTCCCAGACCTTAGCTTCAAAAAGTTTCTTCTGACCTCCTTCA
ACAGCCTCCAAGGTGATGTCGTACAGAGTCCCTGAAACCACTTGCTGCTT
CGCACTTACAACTTTTACAAATTGCAGATTTGAATTCTGCTTCTTGTTAT
GCTCATCCACAGCGAAGCGTGCGAGATTAACGATCTCCTGATTGTTGGCT
GTTGCTTCAACCTCACGAACACCGCCTACTGTAGCCACCT
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