CN189261
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 4.095e-81 Identity = 152/216 (70.37%), Postives = 180/216 (83.33%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXXGGGHVYEPAA-----SQPYDRNFLPVNLLEPNHQYARQD 738 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FS+RGRLYEYANNSVR TI+RYKKAC+D+ NP S+TEANTQ+YQQEA+KLRRQIR+IQN NRHI+GE+L +LNFKELKNLE RLEKGI RVRSKKNE+L+AEIE+M+KRE++LQ++NMYLRA+I+E R G VYE SQ Y+RN++PVNLLEPN Q++ QD Sbjct: 28 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARLNPDQQESSVIQ--GTTVYESGVSSHDQSQHYNRNYIPVNLLEPNQQFSGQD 241
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 1.009e-79 Identity = 152/216 (70.37%), Postives = 177/216 (81.94%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXXGGGHVYEPAA-----SQPYDRNFLPVNLLEPNHQYARQD 738 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FS+RGRLYEYANNSVR TI+RYKKAC+D+ NP +ITEANTQ+YQQEA+KLRRQIR+IQNLNRHILGE+L +LNFKELKNLE+RLEKGI RVRSKK+EML+AEIE+M+KREI+LQNDNMYLR++I+E G VYE S Y+RN++ VNLLEPN + QD Sbjct: 28 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITERTGLQQQESSVIHQ----GTVYESGVTSSHQSGQYNRNYIAVNLLEPNQNSSNQD 239
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.713e-74 Identity = 142/213 (66.67%), Postives = 169/213 (79.34%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXXGGGHVYE--PAASQPYDRNFLPVNLLEPNHQYARQD 738 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV+ATI+RYKKAC+DSSN GSI+EAN Q+YQQEA+KLR QI +QN NR++LGE+L+ L+ ++LKNLE ++EKGI ++RSKKNE+L AEIE+M+KREI L N+N YLRA+I+E ERA G YE P Q RN+L VN L+ N+ Y RQD Sbjct: 29 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSNTGSISEANAQYYQQEASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERAQQQQQQQQMNLMPGSSSYELVPPPHQFDTRNYLQVNGLQTNNHYTRQD 241
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 9.145e-73 Identity = 137/213 (64.32%), Postives = 167/213 (78.40%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXXGGGHVYE--PAASQPYDRNFLPVNLLEPNHQYARQD 738 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFS+RGRLYEYANNSV+ATI+RYKKAC+DSSN GS++EAN Q+YQQEA+KLR QI + N NR+++GEAL+ + KELKNLE R+EKGI ++RSKKNE+L AEIE+M+KRE+ L N+N YLRA+I+E ERA + +E P Q RN+L VN L+ N+ Y RQD Sbjct: 29 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANNSVKATIERYKKACSDSSNTGSVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAETERAQHQHQQMNLMPGSSSNYHELVPPPQQFDTRNYLQVNGLQTNNHYPRQD 241
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 2.037e-72 Identity = 138/215 (64.19%), Postives = 169/215 (78.60%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXXGGGHVYEPAASQPYD-RNFLPVNLLEPNHQYARQDDQA 747 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLYEYANNSV+ TI+RYKKAC DS N S++EAN QFYQQEA+KLR++I IQ NR+++GE+L +L ++LK LE +LEKGI R+RSKKNE+L AEIE+M+K+EI L N+N YLRA+I+ENERA G YE A Q +D RN++ +N L+PN+ Y+RQD A Sbjct: 29 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVKGTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAENERAQQHMNLMP-----GSSDYELAPPQSFDGRNYIQLNGLQPNNHYSRQDQTA 238
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 1.725e-71 Identity = 139/213 (65.26%), Postives = 168/213 (78.87%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXXGGGHVYE-PAASQPYD-RNFLPVNLLEPNHQYARQD 738 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV+ATI+RYKKAC+DSSN GSI EAN Q+YQQEA+KLR QI +QN NR+ LGE+L+ LN ++L+NLE ++EKGI ++R+KKNE+L AEIE+M+KREI L N+N YLRA+I+E ER+ G Y+ Q +D RN+L VN L+ N+ Y RQD Sbjct: 29 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSNTGSIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERSQQMNLMP------GSSSYDLVPPQQSFDARNYLQVNGLQTNNHYPRQD 235
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.396e-67 Identity = 126/212 (59.43%), Postives = 166/212 (78.30%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLN-RHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXXGGGHVYEPAASQPYD-RNFLPVNLLEPNHQYARQ 735 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV++T++RYKKA +D+SN G++ E N Q YQQE++KLR+QI +QN N R I+G++++T++ ++LK +E RLEKGI ++R++KNE+L AE+E+M+KRE++LQNDNMYLR+++ ENER Y+ + PYD RNFL VN+++ YA Q Sbjct: 13 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKSTVERYKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNANSRTIVGDSINTMSLRDLKQVENRLEKGIAKIRARKNELLYAEVEYMQKREVELQNDNMYLRSKVVENERG---QQPLNMMGAASTSEYDHMVNNPYDSRNFLQVNIMQQPQHYAHQ 221
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 253.832 bits (647), Expect = 7.498e-67 Identity = 136/225 (60.44%), Postives = 166/225 (73.78%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXXGGGHVYE------PAASQPYD-RNFLPVNLLEP-NHQYA---RQDDQA 747 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NNSV+ TI+RYKKA +D+SN GS+ E N Q+YQQE+ KLR+QI IQN NR ++GE + +++ KEL+NLE RLE+ I R+RSKKNE+L +EI++M+KRE+ L NDN LRA+I+ENER GG YE SQP+D RN+ V L+P NH Y+ RQD A Sbjct: 29 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENER-----NNPSISLMPGGSNYEQLMPPPQTQSQPFDSRNYFQVAALQPNNHHYSSAGRQDQTA 248
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 4.860e-66 Identity = 133/223 (59.64%), Postives = 165/223 (73.99%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXXGGGHVYE------PAASQPYD-RNFLPVNLLEP-NHQY--ARQDDQ 744 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NNSV+ TI+RYKKA +D+SN GS+ E N Q+YQQE+ KLR+QI IQN NR ++GE + +++ KEL+NLE RL++ + R+RSKKNE+L AEI++M+KRE+ L NDN LRA+I+ENER GG YE QP+D RN+ V L+P NH Y A ++DQ Sbjct: 29 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLRAKIAENER-----NNPSMSLMPGGSNYEQIMPPPQTQPQPFDSRNYFQVAALQPNNHHYSSAGREDQ 246
BLAST of CN189261 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.258e-63 Identity = 121/215 (56.28%), Postives = 162/215 (75.35%), Query Frame = 1 Query: 106 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAXXXXXXXXXXXXGGGHVYEPAASQ-PYD-RNFLPVNLLEPNHQYARQDDQ 744 NTTNRQVTFCKRR+GLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNSV+ TI+RYKKA +D+SN ++ E N Q YQQEA KL++QI +QN NR ++G+ ++T+N +ELK LE RL+KG+G++R++KNE+L AEIE+M++RE +LQNDNMYL+++++E+ER G E + YD RNFL N++ Y Q+D+ Sbjct: 55 NTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESERG-----LQTVNMMGSASTSEYVQNMIHYDPRNFLQFNIMHQPQYYPEQEDR 264 The following BLAST results are available for this feature:
BLAST of CN189261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189261 ID=CN189261; Name=CN189261; organism=Citrus sinensis; type=EST; length=770bpback to top |