CN189255

Overview
NameCN189255
Unique NameCN189255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2173 contig Csv1_Contig2173:197..945. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189255 vs. ExPASy Swiss-Prot
Match: LGUL_BRAJU (Lactoylglutathione lyase OS=Brassica juncea GN=GLY I PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.172e-77
Identity = 132/155 (85.16%), Postives = 143/155 (92.26%), Query Frame = 2
Query:    5 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIGKIGGS 469
            QQTMFR+KDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT++AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDDV+KACERFE+LGVEF KKP  GKMK +AFIKDPD YWIEIFDLKTIG   G+
Sbjct:   29 QQTMFRVKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTSTAPTDPTERTVWTFGRPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEQLGVEFVKKPHDGKMKNIAFIKDPDGYWIEIFDLKTIGTTAGN 183          
BLAST of CN189255 vs. ExPASy Swiss-Prot
Match: LGUL_ARATH (Lactoylglutathione lyase OS=Arabidopsis thaliana GN=At1g08110 PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.531e-77
Identity = 133/150 (88.67%), Postives = 141/150 (94.00%), Query Frame = 2
Query:    5 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIG 454
            QQTMFRIKDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT +AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDDV+KACERFE LGVEFAKKP+ GKMK +AFIKDPD YWIEIFDLKTIG
Sbjct:   29 QQTMFRIKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTTTAPTDPTERTVWTFGQPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEELGVEFAKKPNDGKMKNIAFIKDPDGYWIEIFDLKTIG 178          
BLAST of CN189255 vs. ExPASy Swiss-Prot
Match: LGUL_CICAR (Lactoylglutathione lyase OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.411e-77
Identity = 131/152 (86.18%), Postives = 141/152 (92.76%), Query Frame = 2
Query:    5 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIGKI 460
            QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDT  AP++PVDRTVWTF + ATIELTHNWGTESDP+FKGYHNGNS+PRGFGHIGITVDD YKACERF+ LGVEF KKPD GKMKG+AFIKDPD YWIE+FD KTIG +
Sbjct:   30 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTTEAPSNPVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKGIAFIKDPDGYWIELFDRKTIGNV 181          
BLAST of CN189255 vs. ExPASy Swiss-Prot
Match: LGUL_SOYBN (Lactoylglutathione lyase OS=Glycine max GN=GLXI PE=1 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 4.925e-76
Identity = 128/152 (84.21%), Postives = 141/152 (92.76%), Query Frame = 2
Query:    5 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIGKI 460
            QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYE+TA AP++P+D+ VWTF + ATIELTHNWGTESDP+FKGYHNGNSEPRGFGHIG+TVDD YKACERF+ LGVEF KKP+ GKMKG+AFIKDPD YWIEIFD KTIG +
Sbjct:   29 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYENTAEAPSNPIDKVVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDTYKACERFQNLGVEFVKKPEDGKMKGIAFIKDPDGYWIEIFDRKTIGNV 180          
BLAST of CN189255 vs. ExPASy Swiss-Prot
Match: LGUL_SOLLC (Lactoylglutathione lyase OS=Solanum lycopersicum GN=GLX1 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.213e-74
Identity = 129/155 (83.23%), Postives = 140/155 (90.32%), Query Frame = 2
Query:    5 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIGKIGGS 469
            QQTMFRIKDPKVSL+FYS+VLGMSLLKRLDFPEMKFSLYF+GYEDTASAP+DPV+RT WTF + +T+ELTHNWGTESDP+F GYHNGNSEPRGFGHIG+TVDDVYKACERFE LGVEF KKP  GKMKG+AFIKDPD YWIEIFD K I    GS
Sbjct:   29 QQTMFRIKDPKVSLEFYSKVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPSDPVERTAWTFSQKSTLELTHNWGTESDPNFTGYHNGNSEPRGFGHIGVTVDDVYKACERFESLGVEFVKKPLDGKMKGIAFIKDPDGYWIEIFDTKIIKDAAGS 183          
BLAST of CN189255 vs. ExPASy Swiss-Prot
Match: LGUL_MOUSE (Lactoylglutathione lyase OS=Mus musculus GN=Glo1 PE=1 SV=3)

HSP 1 Score: 224.172 bits (570), Expect = 6.049e-58
Identity = 104/152 (68.42%), Postives = 121/152 (79.61%), Query Frame = 2
Query:    5 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIGKI 460
            QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  ++T WTF + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKPD GKMKG+AFI+DPD YWIEI +   I  I
Sbjct:   33 QQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKIATI 183          
BLAST of CN189255 vs. ExPASy Swiss-Prot
Match: LGUL_RAT (Lactoylglutathione lyase OS=Rattus norvegicus GN=Glo1 PE=1 SV=3)

HSP 1 Score: 223.402 bits (568), Expect = 1.032e-57
Identity = 101/145 (69.66%), Postives = 119/145 (82.07%), Query Frame = 2
Query:    5 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFD 439
            QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  +RT W F + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY+AC+RFE LGV+F KKPD GKMKG+AF++DPD YWIEI +
Sbjct:   33 QQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPKDKTERTAWAFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYEACKRFEELGVKFVKKPDDGKMKGLAFVQDPDGYWIEILN 176          
BLAST of CN189255 vs. ExPASy Swiss-Prot
Match: LGUL_MACFA (Lactoylglutathione lyase OS=Macaca fascicularis GN=GLO1 PE=2 SV=3)

HSP 1 Score: 212.616 bits (540), Expect = 1.821e-54
Identity = 96/145 (66.21%), Postives = 115/145 (79.31%), Query Frame = 2
Query:    5 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFD 439
            QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P D  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DV+ AC+RFE LGV+F KKPD GKMKG+AFI+DPD YWIEI +
Sbjct:   33 QQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPAMKFSLYFLAYEDKNDIPKDKEEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVHSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 176          
BLAST of CN189255 vs. ExPASy Swiss-Prot
Match: LGUL_HUMAN (Lactoylglutathione lyase OS=Homo sapiens GN=GLO1 PE=1 SV=4)

HSP 1 Score: 211.846 bits (538), Expect = 3.106e-54
Identity = 96/145 (66.21%), Postives = 115/145 (79.31%), Query Frame = 2
Query:    5 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFD 439
            QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P +  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RFE LGV+F KKPD GKMKG+AFI+DPD YWIEI +
Sbjct:   33 QQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 176          
BLAST of CN189255 vs. ExPASy Swiss-Prot
Match: LGUL_PSEAE (Lactoylglutathione lyase OS=Pseudomonas aeruginosa GN=gloA PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.224e-42
Identity = 88/151 (58.28%), Postives = 103/151 (68.21%), Query Frame = 2
Query:   11 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIGKIG 463
            TM R+KDPK SLDFYSRVLGM LL+RLDF E +FSLYFL        P    +R  +TFG+ + +ELTHNWG+ESD     YHNGN +PRGFGHI  +V D+  ACERFE LGV F K  D G MK VAFI DPD YW+EI      G++G
Sbjct:   27 TMLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAMTRGEEVPDAVDERQRYTFGRQSVLELTHNWGSESDD--SQYHNGNQDPRGFGHICFSVPDLVAACERFETLGVNFVKPLDRG-MKNVAFISDPDGYWVEIVQASLNGEMG 174          
The following BLAST results are available for this feature:
BLAST of CN189255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
LGUL_BRAJU1.172e-7785.16Lactoylglutathione lyase OS=Brassica juncea GN=GLY... [more]
LGUL_ARATH1.531e-7788.67Lactoylglutathione lyase OS=Arabidopsis thaliana G... [more]
LGUL_CICAR3.411e-7786.18Lactoylglutathione lyase OS=Cicer arietinum PE=2 S... [more]
LGUL_SOYBN4.925e-7684.21Lactoylglutathione lyase OS=Glycine max GN=GLXI PE... [more]
LGUL_SOLLC1.213e-7483.23Lactoylglutathione lyase OS=Solanum lycopersicum G... [more]
LGUL_MOUSE6.049e-5868.42Lactoylglutathione lyase OS=Mus musculus GN=Glo1 P... [more]
LGUL_RAT1.032e-5769.66Lactoylglutathione lyase OS=Rattus norvegicus GN=G... [more]
LGUL_MACFA1.821e-5466.21Lactoylglutathione lyase OS=Macaca fascicularis GN... [more]
LGUL_HUMAN3.106e-5466.21Lactoylglutathione lyase OS=Homo sapiens GN=GLO1 P... [more]
LGUL_PSEAE1.224e-4258.28Lactoylglutathione lyase OS=Pseudomonas aeruginosa... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0001I24_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001I24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189255 ID=CN189255; Name=CN189255; organism=Citrus sinensis; type=EST; length=749bp
GAGGCAACAAACGATGTTTCGAATTAAGGACCCCAAAGTTAGTCTTGATT
TCTATTCTCGTGTGTTGGGCATGTCGCTACTAAAGAGGTTGGATTTTCCA
GAAATGAAATTTAGCCTATACTTTTTGGGCTATGAGGATACTGCATCAGC
TCCAGCTGACCCTGTTGATAGAACTGTTTGGACTTTTGGGAAGCCGGCTA
CAATTGAGCTGACTCATAACTGGGGAACAGAAAGTGATCCCGACTTCAAA
GGTTATCACAATGGGAATTCAGAACCCCGTGGCTTTGGGCACATCGGCAT
CACTGTTGATGATGTATATAAGGCATGTGAGAGGTTTGAACGTCTAGGGG
TGGAATTTGCAAAGAAACCAGATGGTGGAAAAATGAAAGGCGTAGCATTC
ATTAAAGACCCTGATGACTATTGGATTGAAATCTTTGACCTCAAAACAAT
TGGAAAAATTGGCGGTAGCACTTGATATGACATTGCTCACTCAGGGAAGG
CGGGATCCATTCATTGTAGTGTTTGATAAATTCTCTGTTGAATAGAACGT
CTTCCATGAGATGCATTATGGACTGAAATACGATCGCAAATATGTTTCAA
ACTCCGAAAGACTTGTACTACAATAATGAGGTTATGATCAAAGCATCTAT
TTTCAATATGTGTGATCTTCTGCTTGTTAGTTGAGGATATTGAAGAGAAG
TATGGTATGGGAACTTCCATTTGCTGATTTCTTTTCTTCACCCAACCAA
back to top