CN189254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR_RICCO (Calreticulin OS=Ricinus communis PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.499e-39 Identity = 69/78 (88.46%), Postives = 76/78 (97.44%), Query Frame = -3 Query: 464 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGKH 697 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDP++YVYPNLKYVGIELWQVKSGT+FDNVL+ +DPEYA +LAEETWGK+ Sbjct: 275 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPEIYVYPNLKYVGIELWQVKSGTLFDNVLICNDPEYAKQLAEETWGKN 352
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR_BERST (Calreticulin OS=Berberis stolonifera PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.763e-38 Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = -3 Query: 464 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGKH 697 G WKPKKIKNPN+KGKWKAPMIDNPDFKDDPD+YV+P LKYVGIELWQVKSGTMFDNVL+ DDP+YA KLAEETWGK+ Sbjct: 277 GEWKPKKIKNPNFKGKWKAPMIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTMFDNVLICDDPDYAKKLAEETWGKN 354
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR1_ARATH (Calreticulin-1 OS=Arabidopsis thaliana GN=CRT1 PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.712e-38 Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = -3 Query: 464 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGKH 697 G WKPKKIKNP YKGKWKAPMIDNP+FKDDP+LYV+P LKYVG+ELWQVKSG++FDNVLVSDDPEYA KLAEETWGKH Sbjct: 277 GEWKPKKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVELWQVKSGSLFDNVLVSDDPEYAKKLAEETWGKH 354
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR_NICPL (Calreticulin OS=Nicotiana plumbaginifolia GN=CAL1 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.154e-38 Identity = 65/77 (84.42%), Postives = 73/77 (94.81%), Query Frame = -3 Query: 467 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGK 697 GPWKPKKIKNPNYKGKWKAP+IDNPDFKDDPDLYV+P LKYVG+ELWQVKSGT+FDN+++ DDPEYA +AEETWGK Sbjct: 282 GPWKPKKIKNPNYKGKWKAPLIDNPDFKDDPDLYVFPKLKYVGVELWQVKSGTLFDNIVICDDPEYAKAIAEETWGK 358
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR_BETVU (Calreticulin OS=Beta vulgaris PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.371e-37 Identity = 67/77 (87.01%), Postives = 73/77 (94.81%), Query Frame = -3 Query: 467 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGK 697 GPWK KKIKNPNYKGKWKAPMIDNP+FKDDP+LYVYP L+YVG+ELWQVKSGT+FDNVLV DDPEYA +LAEETWGK Sbjct: 280 GPWKAKKIKNPNYKGKWKAPMIDNPEFKDDPELYVYPKLRYVGVELWQVKSGTLFDNVLVCDDPEYAKQLAEETWGK 356
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR_PRUAR (Calreticulin OS=Prunus armeniaca PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.791e-37 Identity = 65/77 (84.42%), Postives = 75/77 (97.40%), Query Frame = -3 Query: 467 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGK 697 G WKPKKIKNPN+KGKWKAP+IDNP+FKDDP+LYVYPNLKYVGIELWQVKSGT+FDN+L++D+PEYA +LAEETWGK Sbjct: 279 GEWKPKKIKNPNFKGKWKAPLIDNPEFKDDPELYVYPNLKYVGIELWQVKSGTLFDNILITDEPEYAKQLAEETWGK 355
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR2_ARATH (Calreticulin-2 OS=Arabidopsis thaliana GN=CRT2 PE=1 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 9.826e-36 Identity = 62/77 (80.52%), Postives = 73/77 (94.81%), Query Frame = -3 Query: 467 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGK 697 G WKPK+IKNPNYKGKW+AP+IDNPDFKDDP+LYV+P LKYVG+ELWQVKSG++FDNVL+ DDP+YA KLA+ETWGK Sbjct: 277 GEWKPKQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLELWQVKSGSLFDNVLICDDPDYAKKLADETWGK 353
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR_ORYSJ (Calreticulin OS=Oryza sativa subsp. japonica GN=Os07g0246200 PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34 Identity = 61/78 (78.21%), Postives = 69/78 (88.46%), Query Frame = -3 Query: 464 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGKH 697 GPWK KKIKNPNY+GKWKAPMIDNPDFKDDP +Y + +LKY+GIELWQVKSGT+FDN L++DDPE A AEETWGKH Sbjct: 284 GPWKQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNFLITDDPELAKTFAEETWGKH 361
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR_MAIZE (Calreticulin OS=Zea mays GN=CRT PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.197e-34 Identity = 59/78 (75.64%), Postives = 69/78 (88.46%), Query Frame = -3 Query: 464 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGKH 697 GPWK KKIKNPNY+GKWKAPMIDNPDFKDDP +Y + +LKY+GIELWQVKSGT+FDN++++DDP A AEETWGKH Sbjct: 280 GPWKQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPALAKTFAEETWGKH 357
BLAST of CN189254 vs. ExPASy Swiss-Prot
Match: CALR3_ARATH (Calreticulin-3 OS=Arabidopsis thaliana GN=CRT3 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 5.774e-28 Identity = 49/78 (62.82%), Postives = 65/78 (83.33%), Query Frame = -3 Query: 464 GPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGKH 697 GPWK K+IKNPNYKGKWK P IDNP+F+DDPDLYV ++KY GIE+WQVK+G++FDN+L+ DDP YA + ++ + +H Sbjct: 283 GPWKAKRIKNPNYKGKWKNPWIDNPEFEDDPDLYVLKSIKYAGIEVWQVKAGSIFDNILICDDPAYARSIVDDYFAQH 360 The following BLAST results are available for this feature:
BLAST of CN189254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189254 ID=CN189254; Name=CN189254; organism=Citrus sinensis; type=EST; length=699bpback to top |