CN189227
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189227 vs. ExPASy Swiss-Prot
Match: IDH3_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial OS=Arabidopsis thaliana GN=IDH3 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 5.575e-39 Identity = 79/95 (83.16%), Postives = 89/95 (93.68%), Query Frame = -2 Query: 254 VMPGGNVGADTAVXEQGASAGNVGNEKVVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEEKYRTKDLGGGCTTQQIVDAVIANLD 538 VMPGGNVGA+ A+ EQGASAGNVGN+K+VEQKKANPVALLLSSAMMLRHL+FP+FADRLETAVK+VI E KYRTKDLGG CTTQ++VDAVIA L+ Sbjct: 274 VMPGGNVGAEHAIFEQGASAGNVGNDKMVEQKKANPVALLLSSAMMLRHLRFPTFADRLETAVKQVIKEGKYRTKDLGGDCTTQEVVDAVIAALE 368
BLAST of CN189227 vs. ExPASy Swiss-Prot
Match: IDH1_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial OS=Arabidopsis thaliana GN=IDH1 PE=1 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.162e-36 Identity = 78/95 (82.11%), Postives = 85/95 (89.47%), Query Frame = -2 Query: 254 VMPGGNVGADTAVXEQGASAGNVGNEKVVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEEKYRTKDLGGGCTTQQIVDAVIANLD 538 VMPGGNVGAD AV EQGASAGNVG +K+V + KANPVALLLSSAMMLRHLQFPSFADRLETAVK+VI+E K RTKDLGG TTQ++VDAVIA LD Sbjct: 273 VMPGGNVGADHAVFEQGASAGNVGKDKIVLENKANPVALLLSSAMMLRHLQFPSFADRLETAVKKVIAEGKCRTKDLGGTSTTQEVVDAVIAKLD 367
BLAST of CN189227 vs. ExPASy Swiss-Prot
Match: IDH2_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial OS=Arabidopsis thaliana GN=IDH2 PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 5.769e-36 Identity = 77/95 (81.05%), Postives = 83/95 (87.37%), Query Frame = -2 Query: 254 VMPGGNVGADTAVXEQGASAGNVGNEKVVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEEKYRTKDLGGGCTTQQIVDAVIANLD 538 VMPGGNVGA+ AV EQGASAGNVG + EQK ANPVALLLSSAMMLRHLQFPSFADRLETAVKRVI+E RT+DLGG TTQ++VDAVIANLD Sbjct: 273 VMPGGNVGAEYAVFEQGASAGNVGKDTTEEQKNANPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGNCRTEDLGGNSTTQEVVDAVIANLD 367
BLAST of CN189227 vs. ExPASy Swiss-Prot
Match: IDH4_ARATH (Putative isocitrate dehydrogenase [NAD] subunit-like 4 OS=Arabidopsis thaliana GN=IDH4 PE=5 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.077e-16 Identity = 52/92 (56.52%), Postives = 60/92 (65.22%), Query Frame = -2 Query: 254 GGNVGADTAVXEQGASAGNVGNEKVVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEEKYRTKDLGGGCTTQQIVDAVIANLD 529 GG+ G D A+ EQ G+VGN K NPVALL SS MMLRHL P FADRL+TAV RVISE K + TTQ++VD+VIANLD Sbjct: 217 GGSFGDDYAIFEQ---VGSVGNHK-------NPVALLFSSVMMLRHLLLPLFADRLKTAVTRVISEGKCGNSN----TTTQEVVDSVIANLD 294
BLAST of CN189227 vs. ExPASy Swiss-Prot
Match: IDH1_KLULA (Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial OS=Kluyveromyces lactis GN=IDH1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.962e-13 Identity = 41/94 (43.62%), Postives = 59/94 (62.77%), Query Frame = -2 Query: 257 VMPGGNVGADTAVXEQGASAGNVGNEKVVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEEKYRTKDLGGGCTTQQIVDAVIANL 538 ++PG N G + AV E G+ +VG + + Q ANP A++LSS +MLRHL ++ADR+ A VISE K T+D+GG +T + +AVI L Sbjct: 268 LVPGANFGREYAVFEPGSR--HVGLD-IKGQNVANPTAMILSSTLMLRHLGLNAYADRISKATYDVISEGKSTTRDIGGSASTSEFTNAVIEKL 358
BLAST of CN189227 vs. ExPASy Swiss-Prot
Match: IDH1_AJECA (Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial OS=Ajellomyces capsulata GN=IDH1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.918e-11 Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = -2 Query: 254 VMPGGNVGADTAVXEQGASAGNVGNEKVVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEEKYRTKDLGGGCTTQQIVDAVIANLD 538 ++PG N+G D AV E G +VG + + + +ANP AL+LS +M+LRHL A+R+ AV VI E RT+D+GG +T + AV+ ++ Sbjct: 294 IVPGCNMGRDVAVFEPGCR--HVGLD-IKGKDQANPTALILSGSMLLRHLGLDEHANRISKAVYDVIGEGVTRTRDMGGQASTHEFTRAVLDKME 385 The following BLAST results are available for this feature:
BLAST of CN189227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189227 ID=CN189227; Name=CN189227; organism=Citrus sinensis; type=EST; length=539bpback to top |