EY757208
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY757208 vs. ExPASy Swiss-Prot
Match: LSM1_SCHPO (U6 snRNA-associated Sm-like protein LSm1 OS=Schizosaccharomyces pombe GN=lsm1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 7.865e-17 Identity = 40/69 (57.97%), Postives = 55/69 (79.71%), Query Frame = 3 Query: 15 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIG 221 S SL Y+D+K++V+LRDG+KL+G L SFDQFAN +L+ ER+ V D+Y DI G+Y++RGENVVL+G Sbjct: 13 SGSLVDYVDRKVIVVLRDGKKLIGILRSFDQFANLMLQYTIERIYVDDMYGDIDRGVYIVRGENVVLLG 81
BLAST of EY757208 vs. ExPASy Swiss-Prot
Match: LSM1_DICDI (Probable U6 snRNA-associated Sm-like protein LSm1 OS=Dictyostelium discoideum GN=lsm1 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.658e-16 Identity = 39/70 (55.71%), Postives = 53/70 (75.71%), Query Frame = 3 Query: 12 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIG 221 +S+ L +DKKL+V+LRDGRK +G + +FDQFAN VL+ ER+ VGD Y D LGL+ IRG+NVV++G Sbjct: 1 MSSGLGDEVDKKLIVVLRDGRKFIGIMRTFDQFANIVLQDTIERIYVGDCYSDKNLGLFFIRGDNVVILG 70
BLAST of EY757208 vs. ExPASy Swiss-Prot
Match: LSM1_MOUSE (U6 snRNA-associated Sm-like protein LSm1 OS=Mus musculus GN=Lsm1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.937e-15 Identity = 43/71 (60.56%), Postives = 51/71 (71.83%), Query Frame = 3 Query: 9 PLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIG 221 P + SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+RGENVVL+G Sbjct: 5 PGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLG 75
BLAST of EY757208 vs. ExPASy Swiss-Prot
Match: LSM1_HUMAN (U6 snRNA-associated Sm-like protein LSm1 OS=Homo sapiens GN=LSM1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.937e-15 Identity = 43/71 (60.56%), Postives = 51/71 (71.83%), Query Frame = 3 Query: 9 PLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIG 221 P + SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+RGENVVL+G Sbjct: 5 PGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLG 75
BLAST of EY757208 vs. ExPASy Swiss-Prot
Match: LSM1_BOVIN (U6 snRNA-associated Sm-like protein LSm1 OS=Bos taurus GN=LSM1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.937e-15 Identity = 43/71 (60.56%), Postives = 51/71 (71.83%), Query Frame = 3 Query: 9 PLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIG 221 P + SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+RGENVVL+G Sbjct: 5 PGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLG 75 The following BLAST results are available for this feature:
BLAST of EY757208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY757208 ID=EY757208; Name=EY757208; organism=Citrus sinensis; type=EST; length=537bpback to top |