EY757189

Overview
NameEY757189
Unique NameEY757189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length475
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12061 contig Csv1_Contig12061:970..1444. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY757189 vs. ExPASy Swiss-Prot
Match: GYP1_SCHPO (GTPase-activating protein gyp1 OS=Schizosaccharomyces pombe GN=gyp1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 8.759e-13
Identity = 29/74 (39.19%), Postives = 55/74 (74.32%), Query Frame = 2 
Query:   17 YLAEG-DALPDFLVYIFASFLLTWSDKLQKLDFQEMVMFLQHLPTNAWTHQEL*MVLSRAYMWHSMFNNCPSHL 235
            Y+AEG     +F +Y+ A+FL+ WS +LQK++FQ++++FLQ +PT  W+ +++ ++LS A++W S+++   +HL
Sbjct:  439 YMAEGVQGFSEFHLYVCAAFLVKWSSELQKMEFQDILIFLQSIPTKDWSTKDIEILLSEAFLWKSLYSGAGAHL 512
[Close]
BLAST of EY757189 vs. ExPASy Swiss-Prot
Match: GYP1_YEAST (GTPase-activating protein GYP1 OS=Saccharomyces cerevisiae GN=GYP1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.144e-12
Identity = 29/66 (43.94%), Postives = 48/66 (72.73%), Query Frame = 2 
Query:   35 ALPDFLVYIFASFLLTWSDKLQKLDFQEMVMFLQHLPTNAWTHQEL*MVLSRAYMWHSMFNNCPSH 232
            +L +F V++ A+FL+ WSD+L ++DFQE + FLQ+ PT  WT  ++ M+LS A++W S++ +  SH
Sbjct:  570 SLNEFHVFVCAAFLIKWSDQLMEMDFQETITFLQNPPTKDWTETDIEMLLSEAFIWQSLYKDATSH 635
The following BLAST results are available for this feature:
BLAST of EY757189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GYP1_SCHPO8.759e-1339.19GTPase-activating protein gyp1 OS=Schizosaccharomy... [more]
GYP1_YEAST1.144e-1243.94GTPase-activating protein GYP1 OS=Saccharomyces ce... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-018-E03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757189 ID=EY757189; Name=EY757189; organism=Citrus sinensis; type=EST; length=475bp
CCACGCGTCCGGACCATATCTTGCTGAAGGAGATGCATTGCCAGATTTTC
TTGTGTACATATTTGCCAGTTTTCTTTTAACGTGGTCAGACAAGCTTCAG
AAGCTGGATTTTCAAGAGATGGTAATGTTCCTTCAACACCTACCAACGAA
CGCCTGGACACACCAAGAACTCTAGATGGTACTATCTAGAGCATACATGT
GGCACAGTATGTTCAATAACTGTCCTAGCCACTTAGCTAGCTGAAGAGGA
ACTCGTAAGAGCAGCCTGAAGTCAGTTTCCTCTTTTCAGTAACTATTTTT
TTCGCTTCATTTTGTGTTCCATTTAATGGGTTTCTAAAGGATTTTTTTAC
CTGCAGAGTGTATGTTTCCTCTAATTTTTAATACAAGAGGCCAACCCATT
TCTCATCTGTATTGTCAAGTGTGGCCTGTAATATATGTGCATTGACGGGC
AAAAAAAAAAAAAAAAAAAAAAAAA
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