EY757120

Overview
NameEY757120
Unique NameEY757120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:350..800. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK1_ARATH (Nucleoside diphosphate kinase 1 OS=Arabidopsis thaliana GN=NDPK1 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 8.921e-30
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 226
            G+ VV TGR IIGATNPA S PGTIRGD AI  GRN+IHGSDSVESA+KEIALWFPDGP+NWQSS+HPW+YE
Sbjct:   77 GKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIGRNVIHGSDSVESARKEIALWFPDGPVNWQSSVHPWVYE 148          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKB_FLABI (Nucleoside diphosphate kinase B OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.197e-28
Identity = 57/72 (79.17%), Postives = 63/72 (87.50%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 226
            G+ VV TGR IIGATNPA+SAPGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G  NW SSLHPWIYE
Sbjct:   77 GKNVVTTGRKIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESAKKEIALWFPEGVANWSSSLHPWIYE 148          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK1_PEA (Nucleoside diphosphate kinase 1 OS=Pisum sativum GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.860e-27
Identity = 56/72 (77.78%), Postives = 61/72 (84.72%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 226
            G+ VV TGR IIGATNPAQS PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+G  NW+SSLH WIYE
Sbjct:   78 GKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDAVESANKEIALWFPEGAANWESSLHSWIYE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_HELAN (Nucleoside diphosphate kinase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.429e-27
Identity = 55/72 (76.39%), Postives = 61/72 (84.72%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 226
            G+ VV TGR IIGATNPA+S PGTIRGD AI  GRN+IHGSD+VESA+KEI LWFP+G  NW SSLHPWIYE
Sbjct:   77 GKNVVTTGRKIIGATNPAESPPGTIRGDFAIDIGRNVIHGSDAVESAKKEIGLWFPEGVANWSSSLHPWIYE 148          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK1_TOBAC (Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.429e-27
Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 226
            G+GVV TGR IIGATNP +SAPGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G   WQSSLH WIYE
Sbjct:   77 GKGVVTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHSWIYE 148          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK1_MESCR (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum GN=NDKP1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.429e-27
Identity = 56/72 (77.78%), Postives = 61/72 (84.72%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 226
            G+GVV TGR IIGATNP  S PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+G +NWQSSLH WIYE
Sbjct:   77 GKGVVLTGRKIIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVESATKEIALWFPEGVVNWQSSLHSWIYE 148          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKA_FLABI (Nucleoside diphosphate kinase A OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.144e-27
Identity = 55/72 (76.39%), Postives = 61/72 (84.72%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 226
            G+ VV TGR IIGATNPA+SAPGTIRGD AI  GRN+IHGSD+VESA+K I LWFP+G  NW SSLHPWIYE
Sbjct:   77 GKNVVTTGREIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESARKVIGLWFPEGVANWSSSLHPWIYE 148          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_CAPAN (Nucleoside diphosphate kinase OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 9.232e-27
Identity = 55/72 (76.39%), Postives = 62/72 (86.11%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 226
            G+GV+ TGR IIGATNP +SAPGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G   WQSSLH WIYE
Sbjct:   77 GKGVLTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHCWIYE 148          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK1_SPIOL (Nucleoside diphosphate kinase 1 OS=Spinacia oleracea GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 9.232e-27
Identity = 54/72 (75.00%), Postives = 61/72 (84.72%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 226
            G+GVV TGR +IGATNP  S PGTIRGD AI  GRN+IHGSD+V+SA KEIALWFPDG ++WQSSLH WIYE
Sbjct:   77 GKGVVATGRKLIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVDSATKEIALWFPDGVVHWQSSLHSWIYE 148          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK1_SOYBN (Nucleoside diphosphate kinase 1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.575e-26
Identity = 56/72 (77.78%), Postives = 60/72 (83.33%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 226
            G+ VV TGR IIGATNPAQS PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+GP N QSS H WIYE
Sbjct:   78 GKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDAVESANKEIALWFPEGPANCQSSQHSWIYE 149          
The following BLAST results are available for this feature:
BLAST of EY757120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
NDK1_ARATH8.921e-3080.56Nucleoside diphosphate kinase 1 OS=Arabidopsis tha... [more]
NDKB_FLABI2.197e-2879.17Nucleoside diphosphate kinase B OS=Flaveria bident... [more]
NDK1_PEA1.860e-2777.78Nucleoside diphosphate kinase 1 OS=Pisum sativum G... [more]
NDK_HELAN2.429e-2776.39Nucleoside diphosphate kinase OS=Helianthus annuus... [more]
NDK1_TOBAC2.429e-2777.78Nucleoside diphosphate kinase 1 OS=Nicotiana tabac... [more]
NDK1_MESCR2.429e-2777.78Nucleoside diphosphate kinase 1 OS=Mesembryanthemu... [more]
NDKA_FLABI4.144e-2776.39Nucleoside diphosphate kinase A OS=Flaveria bident... [more]
NDK_CAPAN9.232e-2776.39Nucleoside diphosphate kinase OS=Capsicum annuum P... [more]
NDK1_SPIOL9.232e-2775.00Nucleoside diphosphate kinase 1 OS=Spinacia olerac... [more]
NDK1_SOYBN1.575e-2677.78Nucleoside diphosphate kinase 1 OS=Glycine max PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757120 ID=EY757120; Name=EY757120; organism=Citrus sinensis; type=EST; length=451bp
CCACGCGTCCGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAG
CCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCT
ATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGC
CCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGA
GCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGC
CTAATTGTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTT
ATTTATGGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAAT
TGAGACCAATCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATA
TACAATATTTAAGCTTTTTTGTTGACTGTATTAAAAAAAAAAAAAAAAAA
A
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