EY757110

Overview
NameEY757110
Unique NameEY757110
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length792
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY757110_ssr565 microsatellite EY757110_ssr565:565..574. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig131 contig Csv1_Contig131:1173..1964. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY757110 vs. ExPASy Swiss-Prot
Match: CO058_DANRE (UPF0580 protein C15orf58 homolog OS=Danio rerio GN=zgc:153343 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.807e-16
Identity = 54/204 (26.47%), Postives = 100/204 (49.02%), Query Frame = 3
Query:   18 ECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVFEGGNSLEDLSNTVSDACICLQENNIPYNV-LIADC-------------GKRIFLLPQ--CYAEKQALGEVSSELLDTQVNPAVWEISGHMVLKRKKDYEEASEENAWRLLAEVSLSEE 581
            +C PQ +   +    +     + +P FR+G+NSLG FA++NHLH   YY+     IE +P K ++     + + EL+++P   L +  G +L+ +   +      L ++NI +N+ L   C             G R+ + P+  C+  K+          ++  N A+ E++GH+  K ++DYE A+EE    ++ +  L +E
Sbjct:  140 KCFPQVLTHLAVQTGIETVLLSADPGFRVGFNSLGGFASVNHLHLHGYYLNHRLKIESSPAKLVL---PNLNLYELVDFPSGFLFYTQGPNLDLVVKAICSLTDVLVDHNIAHNLFLTRGCPPQMEPDTSSSRNGVRVIVWPRLSCFGAKE----------ESAFNVALCELAGHLPFKNRQDYESATEETVQDIIQKYLLPQE 330          
BLAST of EY757110 vs. ExPASy Swiss-Prot
Match: CO058_BOVIN (UPF0580 protein C15orf58 homolog OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 63/220 (28.64%), Postives = 103/220 (46.82%), Query Frame = 3
Query:   24 LPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF---EGGNSLEDLSNTVSDACICLQENNIPYNVLI-------------ADCGKRIFLLPQCYAEKQALGEVSSELLDTQVNPAVWEISGHMVLKRKKDYEEASEENAWRLLAEVSLSEERYQEVNALIFESIARGDD 635
            LPQR+   +    +     + +P FR+G+NSLG  A++NHLH   YY+A   P+E AP++ +   G   ++  L   P  G +F     G  LE L + V  A   L +  I +N+ +             A  G R+ L P+    K + G    E      N A+ E++GH+ +K  +D+   +E  A  L+ E  L   + ++V A +   IAR ++
Sbjct:  177 LPQRLLPGALRAGVEAVLLSSHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEGAPSEPLDPRG---RLHVLQALPAPGFLFYTSRPGPDLEALISRVCRATDYLTDCEIAHNLFVTRGAPPGKATSSSALSGVRVILWPR----KPSFGIKEGEAF----NVALCELAGHLPVKTAQDFSSLTEAAALALIRECLLPPAQAEDVRAALVALIAREEE 385          
BLAST of EY757110 vs. ExPASy Swiss-Prot
Match: CO058_HUMAN (UPF0580 protein C15orf58 OS=Homo sapiens GN=C15orf58 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 59/211 (27.96%), Postives = 100/211 (47.39%), Query Frame = 3
Query:   24 LPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF---EGGNSLEDLSNTVSDACICLQENNIPYNVLI-------------ADCGKRIFLLPQCYAEKQALGEVSSELLDTQVNPAVWEISGHMVLKRKKDYEEASEENAWRLLAEVSLSEERYQEVNALI 608
            LPQR+   +    +     + +P FR+G+NSLG  A++NHLH   YY+A   P+E+AP++ +     G  +  L + P  G +F     G  LE L + V  A   L ++ I +N+ +             A  G R+ L    +A K + G    E      N A+ E++GH+ +K  +D+   +E  A  L+ +  L   + ++V A +
Sbjct:  177 LPQRLLPGALRAGIEAVLLSLHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEQAPSEPL---DPGGHLHLLQDLPAPGFLFYTRGPGTDLESLISRVCRATDYLTDHEIAHNLFVTRGAPPGKTSPSSALIGVRVIL----WARKSSFGIKDGEAF----NVALCELAGHLPVKTSQDFSSLTEAAAVALIQDCRLPPSQAEDVQAAL 376          
BLAST of EY757110 vs. ExPASy Swiss-Prot
Match: CO058_MOUSE (UPF0580 protein C15orf58 homolog OS=Mus musculus PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.011e-14
Identity = 64/217 (29.49%), Postives = 99/217 (45.62%), Query Frame = 3
Query:   24 LPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF---EGGNSLEDLSNTVSDACICLQENNIPYNVLIAD-------------CGKRIFLLPQCYAEKQALGEVSSELLDTQVNPAVWEISGHMVLKRKKDYEEASEENAWRLLAEVSLSEERYQEVNALIFESIAR 626
            LPQR+      + L     + +P FR+G+NSLG  A++NHLH   YY+A P P+E AP+  +   G    I  L   P  G +F     G  LE L + V  A   L +  I +N+ +                G R+ L    +A K + G   S       N A+ E++GH+ +K  +D+   +E  A  L+ +  L E +  EV A +   +A+
Sbjct:  178 LPQRLLPGVLRVGLEAVLLSLHPGFRVGFNSLGGLASVNHLHLHCYYLAHPLPVEGAPSTPLDPKGC---IHLLQALPAPGFLFYTSGPGPDLEVLISRVCRATDYLSDREIAHNLFVTRGAPPGPTSSTSDLSGIRVIL----WARKSSFGIKESGAF----NVALCELAGHLPVKTSQDFSSLTEAAAVALIQDCLLPETQAGEVRAALVALMAQ 383          
BLAST of EY757110 vs. ExPASy Swiss-Prot
Match: CO058_MACFA (UPF0580 protein C15orf58 homolog OS=Macaca fascicularis GN=QflA-20034 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.852e-14
Identity = 60/211 (28.44%), Postives = 97/211 (45.97%), Query Frame = 3
Query:   24 LPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF---EGGNSLEDLSNTVSDACICLQENNIPYNVLI-------------ADCGKRIFLLPQCYAEKQALGEVSSELLDTQVNPAVWEISGHMVLKRKKDYEEASEENAWRLLAEVSLSEERYQEVNALI 608
            LPQR+   +    +     + +P FR+G+NSLG  A++NHLH   YY+A   P+E+AP++ +     G  +  L   P  G +F     G  LE L   V  A   L ++ I +N+ +             A  G R+ L    +A K   G    E      N A+ E++GH+ +K  +D+   +E  A  L+ +  L   + +EV A +
Sbjct:  177 LPQRLLPGALRAGIEAVLLSLHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEQAPSEPL---DPGGHLHLLQGLPAPGFLFYTRGPGLDLESLICRVCRATDYLTDHEIAHNLFVTRGAPPGKTSPSSALTGVRVIL----WARKSCFGIKDGEAF----NVALCELAGHLPVKTSQDFSSLTEAAAVALIQDCRLPPSQAEEVQAAL 376          
BLAST of EY757110 vs. ExPASy Swiss-Prot
Match: CO058_XENLA (UPF0580 protein C15orf58 homolog OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-13
Identity = 53/214 (24.77%), Postives = 103/214 (48.13%), Query Frame = 3
Query:   21 CLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF-EGGNSLEDLSNTVSDACICLQENNIPYNVLIA-----DCGK----RIFLLPQCYAEKQALG--EVSSELLDTQVNPAVWEISGHMVLKRKKDYEEASEENAWRLLAEVSLSEERYQEVNALIFESIAR 626
            CLPQ +  D  L  L     + +P FR+G+NSLG FA++NHLH   +Y+     IE + +K +      +    + ++P    +F   G +L+  +  +      L   NI +N+ I      D G     R  +    +A K + G  EVS+       N A+ E++GH+ +K ++D+   +E++   ++    L+++ + +++  + E + +
Sbjct:  195 CLPQILTEDLMLFGLESVLLSAHPGFRVGFNSLGGFASVNHLHLHGFYLDHDLFIESSSSKPLCPE---MNFHLITHFPAPSFLFYTDGRNLKSTAQNICKVTDFLVAKNIAHNLFITRGSNPDTGNGSEGRNGIRVNIWARKPSFGAKEVSA------FNVALCELAGHLPVKNQEDFNSITEDSVIDIIHNCLLADDEFTQLSLDLVEYLRK 399          
BLAST of EY757110 vs. ExPASy Swiss-Prot
Match: CO058_XENTR (UPF0580 protein C15orf58 homolog OS=Xenopus tropicalis PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12
Identity = 51/205 (24.88%), Postives = 100/205 (48.78%), Query Frame = 3
Query:   21 CLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF-EGGNSLEDLSNTVSDACICLQENNIPYNVLIA-----DCGK----RIFLLPQCYAEKQALG--EVSSELLDTQVNPAVWEISGHMVLKRKKDYEEASEENAWRLLAEVSLSEERYQEVN 599
            CLPQ +  +  L  +     + +P FR+G+NSLG FA++NHLH   +Y+     IE + +K +      +    + ++P  G +F   G  L+  +  +      L   NI +N+ +      D GK    R  +    +A K + G  EVS+       N A+ E++GH+ +K ++D+   +E++   ++    L+++ + +++
Sbjct:  194 CLPQILTENLMLFGMESVFLSSHPGFRVGFNSLGGFASVNHLHLHGFYLDHELLIESSCSKPLCPE---INFHLVTHFPAPGFLFYTDGKDLKSTAQKICKVTDFLVAKNIAHNLFVTRGSNPDTGKVSEDRNGIRVIIWARKPSFGAKEVSA------FNVALCELAGHLPVKNQEDFISITEDSVIAIIHSCLLADDEFTQLS 389          
The following BLAST results are available for this feature:
BLAST of EY757110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CO058_DANRE2.807e-1626.47UPF0580 protein C15orf58 homolog OS=Danio rerio GN... [more]
CO058_BOVIN2.376e-1528.64UPF0580 protein C15orf58 homolog OS=Bos taurus PE=... [more]
CO058_HUMAN1.179e-1427.96UPF0580 protein C15orf58 OS=Homo sapiens GN=C15orf... [more]
CO058_MOUSE2.011e-1429.49UPF0580 protein C15orf58 homolog OS=Mus musculus P... [more]
CO058_MACFA5.852e-1428.44UPF0580 protein C15orf58 homolog OS=Macaca fascicu... [more]
CO058_XENLA1.703e-1324.77UPF0580 protein C15orf58 homolog OS=Xenopus laevis... [more]
CO058_XENTR1.104e-1224.88UPF0580 protein C15orf58 homolog OS=Xenopus tropic... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-E04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757110 ID=EY757110; Name=EY757110; organism=Citrus sinensis; type=EST; length=792bp
CCACGCGTCCGGTTCTTGAGTGCTTGCCACAGAGGATTGACCGTGATAGC
TTCTTGCTCGCACTTTACATGGCTGCAGAAGCTGGGAATCCATACTTCAG
GTTGGGTTACAACAGCTTGGGTGCATTTGCTACCATCAACCACCTTCACT
TCCAGGCTTACTACATGGCCTTGCCTTTTCCAATTGAGAAGGCTCCTACC
AAGAAGATAATCTCTACTGGCAGTGGTGTGAAGATCTCTGAGCTTTTAAA
CTATCCAGTCAGAGGCCTCGTCTTTGAAGGTGGAAACTCTCTGGAAGACT
TATCCAACACAGTCTCGGATGCGTGCATTTGCCTTCAAGAGAACAACATT
CCTTACAATGTTCTCATTGCTGATTGTGGAAAGCGCATATTTCTCTTACC
ACAGTGCTATGCTGAGAAACAAGCTCTTGGGGAAGTGAGTTCAGAGCTTC
TGGACACCCAAGTGAACCCTGCTGTGTGGGAGATTAGTGGGCATATGGTG
TTAAAGAGGAAGAAGGACTATGAAGAGGCATCCGAGGAAAATGCTTGGAG
GCTGCTTGCCGAAGTCTCTCTCTCTGAGGAGAGGTACCAAGAAGTAAATG
CTCTCATCTTTGAAAGCATTGCGCGTGGTGATGATGCCAATGGAGGGTGT
GCTGAGAGCGTATTTGGGGAAGCAGATGCGAAACAAAGTCTGGCGGTGAA
GTGGATGCATTAATAAAACTCCTGCCCTGNCATGGTGTTCGGGACTCCAG
AATGCTGGTTCTCAGTAGATCCCTGGCTTGGTGACCAAACGG
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