EY756881

Overview
NameEY756881
Unique NameEY756881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9656 contig Csv1_Contig9656:215..1067. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 1.013e-101
Identity = 177/201 (88.06%), Postives = 188/201 (93.53%), Query Frame = 3
Query:   72 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGEGQGNGNPASL 674
            MASGGGYGD N KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSK+TIGVEFQTRTLVI HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHI RWLEELR+HADKNIVIILIGNK DL  QR VPTEDAKEFA+KEGLFFLETSALEATNVE+AF TV+TEI+NIVNKK+L A E QGNGN ASL
Sbjct:    1 MASGGGYGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAADESQGNGNSASL 201          

HSP 2 Score: 42.3578 bits (98), Expect = 1.013e-101
Identity = 16/22 (72.73%), Postives = 20/22 (90.91%), Query Frame = 1
Query:  679 GQKILVPGPAQEIPXKSSMCCR 744
            GQKI++PGPAQEIP K +MCC+
Sbjct:  203 GQKIIIPGPAQEIPAKRNMCCQ 224          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1)

HSP 1 Score: 350.903 bits (899), Expect = 7.820e-99
Identity = 174/196 (88.78%), Postives = 189/196 (96.43%), Query Frame = 3
Query:   87 GYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGEGQGNGNPASL 674
            GYGD +QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHI RWLEELR+HAD+NIVI+LIGNK+DLE+QRAVPTEDAKEFAQKEGLFFLETSA+EATN+E+AF+TV+TEIFNIVNKKNL A + Q NGNPASL
Sbjct:    4 GYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADDNQSNGNPASL 199          

HSP 2 Score: 31.9574 bits (71), Expect = 7.820e-99
Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:  679 GQKILVPGPAQEIPXKSSMC 738
            G+KILVPGP Q IP K + C
Sbjct:  201 GKKILVPGPGQVIPEKKACC 220          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 2.481e-97
Identity = 172/196 (87.76%), Postives = 187/196 (95.41%), Query Frame = 3
Query:   87 GYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGEGQGNGNPASL 674
            GYGD +QKIDYVFKVVLIGDSAVGK+QILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHI RWLEELR+HAD+NIVI+L GNK+DLE+QRAVPTEDAKEFAQKEGLFFLETSA+EAT +E+AF+TV+TEIFNIVNKKNL A E Q N NPASL
Sbjct:    4 GYGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAADENQSNSNPASL 199          

HSP 2 Score: 31.9574 bits (71), Expect = 2.481e-97
Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:  679 GQKILVPGPAQEIPXKSSMC 738
            G+KILVPGP Q IP K + C
Sbjct:  201 GKKILVPGPGQVIPGKKACC 220          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2)

HSP 1 Score: 314.309 bits (804), Expect = 2.522e-85
Identity = 158/198 (79.80%), Postives = 176/198 (88.89%), Query Frame = 3
Query:   81 GGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGEGQGNGNPASL 674
            GG YG+  QKIDYVFKVVLIGDSAVGKSQ+LARFARNEF+LDSKATIGVEFQTRTL I  ++VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDH+ RWLEELR HADKNIVI+LIGNKSDL   R VPTEDAKEFA++E LFF+ETSALE+TNVENAFMTV+TEI+ IV+KKNL A E   +   +SL
Sbjct:    5 GGSYGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVDSSGNSSL 202          

HSP 2 Score: 23.483 bits (49), Expect = 2.522e-85
Identity = 10/20 (50.00%), Postives = 12/20 (60.00%), Query Frame = 1
Query:  679 GQKILVPGPAQEIPXKSSMC 738
            G KI+VPG     P K+S C
Sbjct:  205 GTKIVVPGQEPAPPTKASCC 224          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.603e-68
Identity = 129/205 (62.93%), Postives = 163/205 (79.51%), Query Frame = 3
Query:  102 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGEGQGN--GNPASLXWAEDSCSRPSS 710
            + + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GNKSDL+  RAV  ED +  A+KEGL FLETSALEA N+E AF T++TEI++I++KK L A E   N  G   ++  A+ S ++  S
Sbjct:    6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQEASSNLPGQGTTINVADASANQRRS 210          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 4.664e-68
Identity = 119/188 (63.30%), Postives = 162/188 (86.17%), Query Frame = 3
Query:   99 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGEGQGNGN 662
            P+++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+++  +F++++RWL+ELR HAD NIVI+LIGNK+DL+  RAV TEDA+ +A+KEGL F+ETSALEA NVE AF T+++E++ I++KK++++ +   N N
Sbjct:    5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTANAN 192          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.772e-67
Identity = 126/196 (64.29%), Postives = 161/196 (82.14%), Query Frame = 3
Query:   84 GGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGE-GQGNGNPA 668
            GGY   ++  DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF T+TL +  K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +F++  RWL+ELR H D NIV++LIGNKSDL    AVPTED K FA++E L+F+ETSALEATNVENAF  V+T+I+ IV+K+ + AG+ G  +G P+
Sbjct:    2 GGYRTDDE-YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGDSGSSSGLPS 196          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.023e-67
Identity = 124/181 (68.51%), Postives = 152/181 (83.98%), Query Frame = 3
Query:  102 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGE 644
            + + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GNKSDL   RAV  +D    ++KEGL FLETSALEATN+E AF T++TEI++IV+KK L A E
Sbjct:    6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQE 186          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4)

HSP 1 Score: 254.988 bits (650), Expect = 3.949e-67
Identity = 123/181 (67.96%), Postives = 152/181 (83.98%), Query Frame = 3
Query:  102 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGE 644
            +Q+ DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRT  ++ K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ GNKSDL   R+V  ED +  A+KEGL FLETSALEATNVE AF T++ EI++I++KK L A E
Sbjct:    6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQE 186          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 5.157e-67
Identity = 123/191 (64.40%), Postives = 154/191 (80.63%), Query Frame = 3
Query:   93 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGEGQGNGNP 665
            G  + +  Y+FK+VLIGDS VGKS IL+RF RN FSLDSK+TIGVEF T++L ++ K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQSFD++ RWL ELR HAD +IVI+++GNKSDL   RAV  ++ K  A+KEGLFFLETSA+EA NVE AF T++TE++ IVN+K L A E      P
Sbjct:    3 GRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALAAKEAAAASAP 193          
The following BLAST results are available for this feature:
BLAST of EY756881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RB11A_LOTJA1.013e-10188.06Ras-related protein Rab11A OS=Lotus japonicus GN=R... [more]
RB11D_TOBAC7.820e-9988.78Ras-related protein Rab11D OS=Nicotiana tabacum GN... [more]
RB11C_TOBAC2.481e-9787.76Ras-related protein Rab11C OS=Nicotiana tabacum GN... [more]
RGP1_ORYSJ2.522e-8579.80Ras-related protein RGP1 OS=Oryza sativa subsp. ja... [more]
RB2BV_BETVU1.603e-6862.93Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB... [more]
RAA2A_ARATH4.664e-6863.30Ras-related protein RABA2a OS=Arabidopsis thaliana... [more]
RB11D_LOTJA1.772e-6764.29Ras-related protein Rab11D OS=Lotus japonicus GN=R... [more]
RB11C_LOTJA3.023e-6768.51Ras-related protein Rab11C OS=Lotus japonicus GN=R... [more]
RAA2C_ARATH3.949e-6767.96Ras-related protein RABA2c OS=Arabidopsis thaliana... [more]
RGP2_ORYSJ5.157e-6764.40Ras-related protein RGP2 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-G03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756881 ID=EY756881; Name=EY756881; organism=Citrus sinensis; type=EST; length=854bp
CCACGCGTCCGTGTGATTTGTGAAGTTGGTCGGTCTTGGTAAGCTCGATC
TCTTACTAACTCTCAGTAGAAATGGCCAGCGGAGGAGGCTATGGAGATCC
CAATCAGAAAATTGATTACGTATTCAAAGTTGTTTTAATCGGAGACTCGG
CCGTCGGCAAGTCTCAGATACTGGCAAGGTTTGCTCGAAACGAGTTCAGT
TTGGACTCTAAAGCCACCATTGGAGTTGAGTTTCAAACTAGGACTTTAGT
TATTCAACATAAGAGCGTCAAGGCACAGATCTGGGACACTGCTGGCCAAG
AACGATACAGGGCTGTCACAAGTGCATATTACAGAGGTGCTGTTGGGGCA
ATGCTGGTTTACGACATTAGCAGACGCCAGAGCTTTGATCACATAACCCG
TTGGCTGGAAGAGTTGCGAAGCCATGCTGACAAGAATATTGTTATCATTC
TCATTGGCAACAAAAGTGACCTTGAGGAGCAGCGGGCGGTTCCTACAGAA
GATGCCAAAGAATTTGCTCAGAAGGAAGGACTATTCTTCTTGGAGACCTC
AGCACTGGAAGCAACTAATGTGGAAAATGCTTTCATGACTGTNGTGACTG
AGATTTTCAACATTGTAAACAAGAAGAATCTAACTGCTGGTGAAGGTCAA
GGCAATGGCAACCCTGCATCCCTTTNCTGGGCAGAAGATTCTTGTTCCAG
GCCCAGCTCAAGAAATCCCTGNCAAGAGCAGCATGTGCTGTAGAACATGA
TGCAATTTGATATTACTCTCATATTGCACGAATCGGTTTATGGTANTAAT
AACATTTTTTTGAAAAGGGNTGTGCGCTTGGGGTGTATATTTTCCCATTG
GCTA
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