EY756859

Overview
NameEY756859
Unique NameEY756859
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: UPL2_ARATH (E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana GN=UPL2 PE=1 SV=2)

HSP 1 Score: 405.216 bits (1040), Expect = 2.630e-112
Identity = 202/264 (76.52%), Postives = 222/264 (84.09%), Query Frame = 3
Query:   12 RQNPGLLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQHDHHHS-PLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDADXEKLILYERAQVTDYELIPGWTIXKVLERIA-TVCGFRCXASFDDCYSASINAFLEDL 797
            RQNP LLEKSFS+MLK PR +DFDNK+A+FRS+I+HQHD H S PLRISVRRAY+LEDSYNQLRMRS QDLKGRL V FQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGN++TFQPNPNSVYQTEHLSYFKFVGR+V KALFDGQLLDV+FTRSFYKHILGVKVTYHDIEA+DPDY+KNLKW+LEND+SD+LDLTFS+DAD EK ILYE+ +VTDYEL PG    +V E                      INAFLE L
Sbjct: 3251 RQNPSLLEKSFSMMLKAPRLIDFDNKKAYFRSRIRHQHDQHISGPLRISVRRAYVLEDSYNQLRMRSPQDLKGRLNVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNDATFQPNPNSVYQTEHLSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWLLENDVSDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTSAIRPQINAFLEGL 3514          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: UPL1_ARATH (E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3)

HSP 1 Score: 402.905 bits (1034), Expect = 1.305e-111
Identity = 202/266 (75.94%), Postives = 224/266 (84.21%), Query Frame = 3
Query:   12 RQNPGLLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQHDHHHS-PLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDADXEKLILYERAQVTDYELIPGWTIXKVLER-----IATVCGFRCXASFDDCYSASINAFLE 791
            RQNP LLEKS S+MLK PR +DFDNK+A+FRS+I+HQHD H S PLRISVRRAY+LEDSYNQLRMRS QDLKGRL V FQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGN++TFQPNPNSVYQTEHLSYFKFVGR+V KALFDGQLLDV+FTRSFYKHILGVKVTYHDIEA+DPDY+KNLKW+LEND+SD+LDLTFS+DAD EK ILYE+ +VTDYEL PG    +V E      +  V G        +     INAFLE
Sbjct: 3274 RQNPSLLEKSLSMMLKAPRLIDFDNKKAYFRSRIRHQHDQHISGPLRISVRRAYVLEDSYNQLRMRSPQDLKGRLNVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNDATFQPNPNSVYQTEHLSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWLLENDVSDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVAGH----ILTNAIRPQINAFLE 3535          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: TOM1_NEUCR (E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa GN=B11B22.010 PE=3 SV=3)

HSP 1 Score: 213.001 bits (541), Expect = 1.915e-54
Identity = 99/210 (47.14%), Postives = 149/210 (70.95%), Query Frame = 3
Query:   12 RQNPGLLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQHD---HHHSPLRISVRRAYILEDSYNQLRMRSTQDLK-GRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNE-STFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDAD 626
            R NP L+  +FSL++K P+ ++FDNKR +F   +  ++    H   PL++ VRR ++  DS+  L  +   +LK G+L + FQGEEG+DAGG+TREW+Q+LSR +FD   +LF  V ++ +TF PN  S    EHL +FKF+GR++GKAL++G+LL+ +F+R+ YK ILG  V+  D+E+ DPDY+K+L WMLENDI+D++  TFS++ D
Sbjct: 3622 RHNPKLMSGTFSLLVKNPKVLEFDNKRNYFNRSVHSKYQQTRHSFPPLQLQVRREHVFHDSFRSLYYKKADELKFGKLNIRFQGEEGVDAGGVTREWFQVLSRQMFDPNYVLFVPVSSDRTTFHPNKLSPINDEHLPFFKFIGRIIGKALYEGRLLECYFSRAVYKRILGKPVSVKDMESFDPDYYKSLVWMLENDITDIITETFSVEDD 3831          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: PTR1_SCHPO (E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharomyces pombe GN=ptr1 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.381e-51
Identity = 105/272 (38.60%), Postives = 170/272 (62.50%), Query Frame = 3
Query:   21 PGLLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQH-DHHHSPLRISVRRAYILEDSYNQLRMRSTQDLK-GRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTV-GNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDADXEKLILYERAQVTDYELIPGWTIXKVLE-----RIATVCGFRCXASFDDCYSASINAFLEDLPNYFL 812
            P L+  SFSL++K P+ ++F+NKR +F  ++  +     + PL I+VRR ++  DSY  L  +   ++K  +L +HF+ EEG+DAGG+TREW Q+L+R +F+    LF  V G+ +TF PN +S    +HLS+FKF GR++GKAL+DG+LLD HF+R+ YKH+L   V+  DIE++DPDY+K+L WML NDI+D++   F+++ D    +  E+  V   +LIP      V E      +  +  ++   S  D   + ++ F + +P++ +
Sbjct: 2828 PSLMSGSFSLLVKNPKVLEFENKRNYFNRQLHEEAAKEQYPPLNITVRRDHVFLDSYRALHFKDADEVKFSKLNIHFRDEEGVDAGGVTREWLQVLARQMFNPDYALFLPVTGDATTFHPNRDSSVNPDHLSFFKFTGRIIGKALYDGRLLDCHFSRAVYKHMLHRSVSVKDIESLDPDYYKSLVWMLNNDITDIITEEFAVEKD----VFGEKTVV---DLIPNGRNIPVTELNKQNYVNRMVDYKLRESVKDQLKSLLDGFSDIIPSHLI 3092          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: TOM1_ASHGO (Probable E3 ubiquitin-protein ligase TOM1 OS=Ashbya gossypii GN=TOM1 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 7.532e-51
Identity = 98/207 (47.34%), Postives = 144/207 (69.57%), Query Frame = 3
Query:   12 RQNPGLLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQHDHHHSPLRISVRRAYILEDSYNQLRMRSTQDLK-GRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNE-STFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDAD 626
            R NP L+   FSL++K P+ +DFDNKR +F ++++    H    L ISVRR ++  DSY  L  +S +D+K  +L + F+GE G+DAGG+TREWYQ+LSR +F+    LF  V ++ +TF+PN  S    EHLS+FKF+G ++GKA+ D   LD HF+R  YK+ILG  V   D+E++D DY+K+L W+LENDI+D+++ TFS++ D
Sbjct: 2858 RSNPKLMSGPFSLLVKNPKILDFDNKRYYFTAQLR-AITHDRPKLSISVRREHVFLDSYRSLFFKSNEDIKISKLEISFKGEAGVDAGGITREWYQVLSRQMFNPDYALFIPVASDKTTFRPNRTSGINPEHLSFFKFIGMIIGKAISDQCFLDCHFSREVYKNILGKPVALKDMESLDLDYYKSLIWILENDITDIIEETFSVETD 3063          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: TOM1_YEAST (E3 ubiquitin-protein ligase TOM1 OS=Saccharomyces cerevisiae GN=TOM1 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.088e-49
Identity = 98/208 (47.12%), Postives = 144/208 (69.23%), Query Frame = 3
Query:   12 RQNPGLLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQHDHHHSP-LRISVRRAYILEDSYNQLRMRSTQDLKG-RLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTV-GNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDAD 626
            R NP L+   F+L++K P+ +DFDNKR  F +K+K   D+   P L I+VRR  +  DSY  L  ++  ++K  +L + F+GE G+DAGG+TREWYQ+LSR +F+    LF  V  +++TF PN  S    EHLS+FKF+G ++GKA+ D   LD HF+R  YK+ILG  V+  D+E++DPDY+K+L W+LENDI+D+++ TFS++ D
Sbjct: 2868 RSNPKLMSGPFALLVKNPKVLDFDNKRYFFNAKLKS--DNQERPKLPITVRREQVFLDSYRALFFKTNDEIKNSKLEITFKGESGVDAGGVTREWYQVLSRQMFNPDYALFLPVPSDKTTFHPNRTSGINPEHLSFFKFIGMIIGKAIRDQCFLDCHFSREVYKNILGRPVSLKDMESLDPDYYKSLVWILENDITDIIEETFSVETD 3073          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: HUWE1_MOUSE (E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus GN=Huwe1 PE=1 SV=4)

HSP 1 Score: 177.178 bits (448), Expect = 1.165e-43
Identity = 99/261 (37.93%), Postives = 154/261 (59.00%), Query Frame = 3
Query:   27 LLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQHDH-HHSPLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLF-TTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDV-LDLTFSIDADXEKLILYERAQVTDYELIPGWTIXKVLERIATVCGFRCXASFDDCYSASINAFLEDLP 800
            L +  F++++   R +DFD KR +FR +++   +      + + VRR ++ EDSY +L  +S +++K RL + F+GEEG DAGGL REWY ++SR +F+    LF T+ G+  T+  NP+S     HLSYFKFVGR+V KA++D +LL+ +FTRSFYKHILG  V Y D+E+ D  +++ L ++LEND+S +  DLTFS +     +      +     ++   T     E +  VC  R   +     +A +  F E +P
Sbjct: 3980 LADGPFAVLVDYIRVLDFDVKRKYFRQELERLDEGLRKEDMAVHVRRDHVFEDSYRELHRKSPEEMKNRLYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHCNPNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLENDVSTLGYDLTFSTEVQEFGVCEVRDLKPNGANILV--TEENKKEYVHLVCQMRMTGAIRKQLAAFLEGFYEIIP 4238          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: HUWE1_HUMAN (E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens GN=HUWE1 PE=1 SV=3)

HSP 1 Score: 177.178 bits (448), Expect = 1.165e-43
Identity = 99/261 (37.93%), Postives = 154/261 (59.00%), Query Frame = 3
Query:   27 LLEKSFSLMLKVPRFVDFDNKRAHFRSKIKHQHDH-HHSPLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLF-TTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDV-LDLTFSIDADXEKLILYERAQVTDYELIPGWTIXKVLERIATVCGFRCXASFDDCYSASINAFLEDLP 800
            L +  F++++   R +DFD KR +FR +++   +      + + VRR ++ EDSY +L  +S +++K RL + F+GEEG DAGGL REWY ++SR +F+    LF T+ G+  T+  NP+S     HLSYFKFVGR+V KA++D +LL+ +FTRSFYKHILG  V Y D+E+ D  +++ L ++LEND+S +  DLTFS +     +      +     ++   T     E +  VC  R   +     +A +  F E +P
Sbjct: 3977 LADGPFAVLVDYIRVLDFDVKRKYFRQELERLDEGLRKEDMAVHVRRDHVFEDSYRELHRKSPEEMKNRLYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHCNPNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLENDVSTLGYDLTFSTEVQEFGVCEVRDLKPNGANILV--TEENKKEYVHLVCQMRMTGAIRKQLAAFLEGFYEIIP 4235          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: PUB3_SCHPO (E3 ubiquitin-protein ligase pub3 OS=Schizosaccharomyces pombe GN=pub3 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.637e-39
Identity = 101/269 (37.55%), Postives = 150/269 (55.76%), Query Frame = 3
Query:   60 VPRF-VDFDNKRAHFRSKIKHQHDHHHSPL----RISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFT-TVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDAD-------XEKLILYERAQVTD------YELIPGWTIXKVLERIATVCGFRCXASFDDCYSASINAFLEDLPNYF 809
            VP++  DF  K  +FRS+   +      PL     + VRR +I EDSY ++   S  DLK RL + F GE+G+D GGL+RE++ LLS  +FD    LF  +  +  T Q NP+S    EHL+YF+F+GRV+G A+F  + LD  F  S YK +L  KV+  D+E+ID +++++LKW+LENDI+ +LDLTFS++ D        E +   E  +VT+       +L+  W + K +E+            F+  YS  +     DL N F
Sbjct:  405 VPQYKCDFRRKLIYFRSQPGMR------PLPGQCNVKVRRDHIFEDSYAEIMRYSAHDLKKRLMIRFDGEDGLDYGGLSREFFFLLSHKMFDPIYCLFEYSAVDNYTLQINPHSSINPEHLNYFRFIGRVIGLAIFHRRFLDAFFVVSLYKKLLRKKVSLADMESIDAEFYRSLKWVLENDITGILDLTFSVEEDHFGEVRTVELITNGENIEVTEENKKKYVDLVTEWRVSKRVEQ-----------QFNAFYSGFVELVSPDLVNVF 656          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: PUB1_SCHPO (E3 ubiquitin-protein ligase pub1 OS=Schizosaccharomyces pombe GN=pub1 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.779e-37
Identity = 91/197 (46.19%), Postives = 127/197 (64.47%), Query Frame = 3
Query:   45 SLMLKVPRFV-DFDNKRAHFRSKIKHQHDHHHSP--LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLF--TTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSID 620
            SL   VP++  DF  K  +F S    Q   H  P    I VRR +I EDSY ++  +S  DLK RL + F GE+G+D GGL+RE++ LLS  +F+    LF  ++V N  T Q NP+S    EHL+YFKF+GRV+G A+F  + +D  F  SFYK IL  KVT  D+E++D +Y+++L W+L+NDI+ VLDLTFS++
Sbjct:  381 SLDQNVPQYKRDFRRKLIYFLS----QPALHPLPGQCHIKVRRNHIFEDSYAEIMRQSATDLKKRLMIKFDGEDGLDYGGLSREYFFLLSHEMFNPFYCLFEYSSVDNY-TLQINPHSGINPEHLNYFKFIGRVIGLAIFHRRFVDAFFVVSFYKMILQKKVTLQDMESMDAEYYRSLVWILDNDITGVLDLTFSVE 572          
The following BLAST results are available for this feature:
BLAST of EY756859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
UPL2_ARATH2.630e-11276.52E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis th... [more]
UPL1_ARATH1.305e-11175.94E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis th... [more]
TOM1_NEUCR1.915e-5447.14E3 ubiquitin-protein ligase TOM1-like OS=Neurospor... [more]
PTR1_SCHPO3.381e-5138.60E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharo... [more]
TOM1_ASHGO7.532e-5147.34Probable E3 ubiquitin-protein ligase TOM1 OS=Ashby... [more]
TOM1_YEAST1.088e-4947.12E3 ubiquitin-protein ligase TOM1 OS=Saccharomyces ... [more]
HUWE1_MOUSE1.165e-4337.93E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus ... [more]
HUWE1_HUMAN1.165e-4337.93E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens ... [more]
PUB3_SCHPO8.637e-3937.55E3 ubiquitin-protein ligase pub3 OS=Schizosaccharo... [more]
PUB1_SCHPO2.779e-3746.19E3 ubiquitin-protein ligase pub1 OS=Schizosaccharo... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-E02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756859 ID=EY756859; Name=EY756859; organism=Citrus sinensis; type=EST; length=911bp
CCACGCGTCCGCGTCAAAATCCTGGATTACTAGAGAAGTCTTTCTCACTC
ATGCTGAAGGTTCCTCGCTTTGTTGATTTTGACAATAAGCGTGCACATTT
CAGATCAAAAATAAAGCATCAACATGATCACCACCACAGTCCTTTGAGAA
TATCTGTAAGAAGAGCTTACATTCTTGAAGATTCATACAACCAACTGCGC
ATGCGATCAACGCAAGATTTGAAGGGAAGGTTGACTGTTCACTTTCAAGG
AGAGGAAGGCATTGATGCCGGTGGCCTTACAAGGGAGTGGTACCAATTGC
TGTCAAGGGTTATTTTTGACAAGGGAGCCCTACTTTTCACAACAGTGGGC
AATGAATCAACATTCCAGCCCAACCCCAACTCTGTTTACCAAACTGAACA
TCTTTCATATTTCAAGTTTGTTGGGCGAGTTGTTGGAAAAGCTCTTTTTG
ACGGGCAACTGTTGGATGTCCATTTTACTCGATCTTTCTACAAGCACATC
CTGGGGGTTAAAGTTACTTATCATGACATTGAAGCTATTGATCCAGATTA
CTTCAAAAACCTGAAGTGGATGCTTGAGAATGACATCAGTGATGTTCTTG
ACCTCACTTTTAGTATTGATGCTGATGANGAGAAGCTGATTTTGTATGAA
AGGGCGCAGGTAACCGACTATGAGCTAATTCCTGGNTGGACGATATTNAA
GGTACTNGAGAGAATAGCCACAGTATGTGGATTTAGGTGCNGAGCATCGT
TTGACGACTGCTATTCNGCCTCAATAAATGCTTTTCTGGAGGATTTACCC
AACTATTTCCTGGGGAGTTGAATTCTATCTCATGACAAGGGAATAAAATA
TTGATTAGGGGGCTTCGGAAATTGATTTGGATGATTGAGGGCAATCCGGA
TTTTCTGAATA
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