EY756854

Overview
NameEY756854
Unique NameEY756854
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10366 contig Csv1_Contig10366:809..1473. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756854 vs. ExPASy Swiss-Prot
Match: P5CS2_ARATH (Delta-1-pyrroline-5-carboxylate synthetase B OS=Arabidopsis thaliana GN=P5CSB PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 2.753e-61
Identity = 113/137 (82.48%), Postives = 120/137 (87.59%), Query Frame = 3
Query:   12 GGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNL 422
            GGPRAS  L IPET+ FHHEY+S  CTVEIV+DV  AIDHIHQHGSAHTDCIV ED +VAE FL QVDSAAVFHNASTRF DG RFGLGAEVGISTSRIHARGPVGVEGLLTTRWI+RG G VVDGD G+VYTHK+L
Sbjct:  577 GGPRASAKLNIPETKSFHHEYSSKACTVEIVEDVYGAIDHIHQHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWIMRGKGQVVDGDNGIVYTHKDL 713          
BLAST of EY756854 vs. ExPASy Swiss-Prot
Match: P5CS_ACTDE (Delta-1-pyrroline-5-carboxylate synthetase OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 8.856e-60
Identity = 109/137 (79.56%), Postives = 121/137 (88.32%), Query Frame = 3
Query:   12 GGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNL 422
            GGPRAS LL IPE R  HHEY+S+ CT+EIVDDV AAIDHIH+HGSAHTD I+ ED +VAE FL QVDS++V HNASTRF DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI RG+G VVDGD+G+VYTHK+L
Sbjct:  577 GGPRASSLLHIPEARSLHHEYSSLACTIEIVDDVYAAIDHIHRHGSAHTDSIITEDHEVAEIFLRQVDSSSVLHNASTRFSDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIARGSGQVVDGDKGIVYTHKDL 713          
BLAST of EY756854 vs. ExPASy Swiss-Prot
Match: P5CS1_ARATH (Delta-1-pyrroline-5-carboxylate synthetase A OS=Arabidopsis thaliana GN=P5CSA PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.511e-59
Identity = 107/141 (75.89%), Postives = 122/141 (86.52%), Query Frame = 3
Query:   12 GGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLALQS 434
            GGPRASK+L IPE R F+HEY +  CTVE+V+DV  AIDHIH+HGSAHTDCIV ED +VAE FL QVDSAAVFHNASTRF DG RFGLGAEVG+ST RIHARGPVGVEGLLTTRWI+RG G VVDGD G+VYTH+++ +Q+
Sbjct:  577 GGPRASKILNIPEARSFNHEYCAKACTVEVVEDVYGAIDHIHRHGSAHTDCIVTEDHEVAELFLRQVDSAAVFHNASTRFSDGFRFGLGAEVGVSTGRIHARGPVGVEGLLTTRWIMRGKGQVVDGDNGIVYTHQDIPIQA 717          
BLAST of EY756854 vs. ExPASy Swiss-Prot
Match: P5CS_SOLLC (Delta-1-pyrroline-5-carboxylate synthetase OS=Solanum lycopersicum GN=PRO2 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 9.791e-59
Identity = 106/140 (75.71%), Postives = 121/140 (86.43%), Query Frame = 3
Query:   12 GGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLALQ 431
            GGP+AS LL IPE R F HEY+S+ CTVE+V+DV AAIDHIHQHGSAHTD I+ EDQ+VAE FL QVDSAAVFHNASTRF DG RFGLGAEVGIST RIHARGPVGVEGLLTT+W+ RG+G +VDGD+ +VY+HK+L  Q
Sbjct:  577 GGPKASSLLMIPEARTFRHEYSSLACTVEVVEDVYAAIDHIHQHGSAHTDSIITEDQEVAEVFLRQVDSAAVFHNASTRFSDGFRFGLGAEVGISTGRIHARGPVGVEGLLTTKWLARGSGQIVDGDKSIVYSHKDLTQQ 716          
BLAST of EY756854 vs. ExPASy Swiss-Prot
Match: P5CS_ORYSJ (Delta-1-pyrroline-5-carboxylate synthetase OS=Oryza sativa subsp. japonica GN=P5CS PE=2 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 1.670e-58
Identity = 110/140 (78.57%), Postives = 120/140 (85.71%), Query Frame = 3
Query:   12 GGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLALQ 431
            GGP A K L  P+   FHHEY+SM CTVE VDDV++AIDHIH++GSAHTDCIV  D KVAETFL +VDSAAVFHNASTRF DGARFGLGAEVGIST RIHARGPVGVEGLLTTRWILRG G VV+GD+ VVYTHK+L LQ
Sbjct:  577 GGPIAHKALGFPKAVSFHHEYSSMACTVEFVDDVQSAIDHIHRYGSAHTDCIVTTDDKVAETFLRRVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGRGQVVNGDKDVVYTHKSLPLQ 716          
BLAST of EY756854 vs. ExPASy Swiss-Prot
Match: P5CS_MESCR (Delta-1-pyrroline-5-carboxylate synthetase OS=Mesembryanthemum crystallinum GN=P5CS PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.257e-55
Identity = 107/141 (75.89%), Postives = 119/141 (84.40%), Query Frame = 3
Query:   12 GGPRASKLLQ--IPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLAL 428
            GGPR   L +  I  T+ F+ EY+S  CTVEIVDDV AAI+HI+ HGSAHTDCI+AED KVAETFL  VDSAAV HNASTRFCDG RFGLGAEVGISTSRIHARGPVGVEGLLTTRW+L+G+G VV GD+GVVYTHK+L L
Sbjct:  574 GGPRIDALQEFNIQATQTFNREYSSPACTVEIVDDVYAAIEHINHHGSAHTDCIIAEDHKVAETFLQLVDSAAVLHNASTRFCDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWVLKGSGQVVHGDKGVVYTHKDLPL 714          
BLAST of EY756854 vs. ExPASy Swiss-Prot
Match: ALH13_CAEEL (Probable delta-1-pyrroline-5-carboxylate synthetase OS=Caenorhabditis elegans GN=alh-13 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.470e-38
Identity = 80/140 (57.14%), Postives = 99/140 (70.71%), Query Frame = 3
Query:   15 GPRASKLLQI--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQG--VVYTHKNL 422
            GP+ + LL+   P       EY S+ CT+E+VD+V  A+ HI ++GS HT+ I+ E+   AE FL  VDSA  FHNASTRF DG RFGLGAEVGIST RIHARGPVGVEGLLTT+W+LRG GH+V+  +     Y H+NL
Sbjct:  641 GPKLAALLKFAPPPAESMSFEYGSLECTLEVVDNVEEAVAHIIRYGSGHTESIITENTNTAEHFLKHVDSACAFHNASTRFADGYRFGLGAEVGISTGRIHARGPVGVEGLLTTKWLLRGEGHLVEDFKNGKYSYLHENL 780          
BLAST of EY756854 vs. ExPASy Swiss-Prot
Match: P5CS_HUMAN (Delta-1-pyrroline-5-carboxylate synthetase OS=Homo sapiens GN=ALDH18A1 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.920e-38
Identity = 83/143 (58.04%), Postives = 102/143 (71.33%), Query Frame = 3
Query:   15 GPRASKLLQIP--ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD--GDQG-VVYTHKNLAL 428
            GP+ +  L     E +    EY  +   +E+VD+V+ AIDHIH++GS+HTD IV ED+  AE FL  VDSA VF NASTRF DG RFGLGAEVGISTSRIHARGPVG+EGLLTT+W+LRG  HVV    + G + Y H+NL +
Sbjct:  647 GPKFASYLTFSPSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKDHVVSDFSEHGSLKYLHENLPI 789          
BLAST of EY756854 vs. ExPASy Swiss-Prot
Match: P5CS_MOUSE (Delta-1-pyrroline-5-carboxylate synthetase OS=Mus musculus GN=Aldh18a1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.507e-38
Identity = 83/141 (58.87%), Postives = 101/141 (71.63%), Query Frame = 3
Query:   15 GPRASKLLQIP--ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD--GDQG-VVYTHKNL 422
            GP+ +  L     E +    EY  +   +E+VD V+ AIDHIH++GS+HTD IV E++K AE FL  VDSA VF NASTRF DG RFGLGAEVGISTSRIHARGPVG+EGLLTT+W+LRG  HVV    + G + Y H+NL
Sbjct:  647 GPKFASYLTFSPSEVKSLRTEYGDLEVCIEVVDSVQEAIDHIHKYGSSHTDVIVTENEKTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGQDHVVSDFSEHGSLKYLHENL 787          
BLAST of EY756854 vs. ExPASy Swiss-Prot
Match: P5CS_PONAB (Delta-1-pyrroline-5-carboxylate synthetase OS=Pongo abelii GN=ALDH18A1 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.295e-38
Identity = 82/143 (57.34%), Postives = 102/143 (71.33%), Query Frame = 3
Query:   15 GPRASKLLQIP--ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD--GDQG-VVYTHKNLAL 428
            GP+ +  L     E +    EY  +   +E+VD+V+ AIDHIH++GS+HTD IV E++  AE FL  VDSA VF NASTRF DG RFGLGAEVGISTSRIHARGPVG+EGLLTT+W+LRG  HVV    + G + Y H+NL +
Sbjct:  647 GPKFASYLTFSPSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTENENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKDHVVSDFSEHGSLKYLHENLPI 789          
The following BLAST results are available for this feature:
BLAST of EY756854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
P5CS2_ARATH2.753e-6182.48Delta-1-pyrroline-5-carboxylate synthetase B OS=Ar... [more]
P5CS_ACTDE8.856e-6079.56Delta-1-pyrroline-5-carboxylate synthetase OS=Acti... [more]
P5CS1_ARATH1.511e-5975.89Delta-1-pyrroline-5-carboxylate synthetase A OS=Ar... [more]
P5CS_SOLLC9.791e-5975.71Delta-1-pyrroline-5-carboxylate synthetase OS=Sola... [more]
P5CS_ORYSJ1.670e-5878.57Delta-1-pyrroline-5-carboxylate synthetase OS=Oryz... [more]
P5CS_MESCR2.257e-5575.89Delta-1-pyrroline-5-carboxylate synthetase OS=Mese... [more]
ALH13_CAEEL1.470e-3857.14Probable delta-1-pyrroline-5-carboxylate synthetas... [more]
P5CS_HUMAN1.920e-3858.04Delta-1-pyrroline-5-carboxylate synthetase OS=Homo... [more]
P5CS_MOUSE2.507e-3858.87Delta-1-pyrroline-5-carboxylate synthetase OS=Mus ... [more]
P5CS_PONAB7.295e-3857.34Delta-1-pyrroline-5-carboxylate synthetase OS=Pong... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-D09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756854 ID=EY756854; Name=EY756854; organism=Citrus sinensis; type=EST; length=665bp
CCACGCGTCCGGGCGGACCAAGAGCAAGTAAATTACTACAAATTCCTGAG
ACACGCTTATTCCATCATGAGTACAACTCAATGGTTTGTACGGTTGAAAT
TGTGGACGATGTGCGTGCTGCTATTGACCATATTCATCAACATGGAAGTG
CCCATACTGATTGCATTGTTGCAGAAGATCAAAAAGTTGCTGAAACATTT
TTATGTCAAGTTGACAGTGCTGCAGTATTTCATAATGCAAGTACACGATT
CTGTGATGGAGCACGATTTGGACTTGGTGCAGAGGTTGGAATAAGCACAA
GCAGGATTCATGCTCGTGGTCCAGTCGGAGTTGAAGGATTGCTAACTACT
CGATGGATATTGAGAGGGAATGGACACGTCGTAGATGGTGATCAAGGAGT
CGTCTATACCCACAAGAATCTTGCCTTGCAATCCTAGTAACTTATGGTTC
TAAACCATGTCATTTGTATAATATTATGGTAGCTGCTTCTGAGACTCTAT
TTACTTGGTGTATATTTATTGCACTTTGCTGATGTTATTTATTAAGATCT
TTAGTTTTATTACTTGGATCTTGCTTGGGGTAGAGCCTCATGTAATAGAA
AGTTTCCTCAAGTCAATAATGAAGTTCAGAATTTGAATTGNAAAAAAAAA
AAAAAAAAAAAAAAA
back to top