EY756852

Overview
NameEY756852
Unique NameEY756852
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length608
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9946 contig Csv1_Contig9946:584..1191. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756852 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.877e-17
Identity = 50/126 (39.68%), Postives = 69/126 (54.76%), Query Frame = 1
Query:   16 FECILKNAKSLKATETIGRLMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTH-SLMMKRQVALLLTEPLAI 390
            F+    + K +KA+  I R MDDIA +KF  +R  + SA+ECY  Q+GV+             +SWKD+NEE L PT +P P+L R L  AR    +Y +G D YTH     K  +  LL +P+ I
Sbjct:  431 FKWAASDPKIIKASTIICRFMDDIAEHKFNHRREDDCSAIECYMKQYGVTAQEAYNEFNKHIESSWKDVNEEFLKPTEMPTPVLCRSLNLARVMDVLYREG-DGYTHVGKAAKGGITSLLIDPIQI 555          
BLAST of EY756852 vs. ExPASy Swiss-Prot
Match: HUMS_ARATH (Alpha-humulene/(-)-(E)-beta-caryophyllene synthase OS=Arabidopsis thaliana GN=TPS21 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16
Identity = 44/125 (35.20%), Postives = 65/125 (52.00%), Query Frame = 1
Query:   16 FECILKNAKSLKATETIGRLMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTHSLMMKRQVALLLTEPLAI 390
            FE +  + K   A+E I R  DDI+ Y+FE KR H  + ++CY  Q GVS             ++WKD+N+EL+ P   P P+L R+L  +R     Y    D YT+  ++K  +  LL E + I
Sbjct:  424 FEWLSSHPKIRVASEIISRFTDDISSYEFEHKREHVATGIDCYMQQFGVSKERAVEVMGNIVSDAWKDLNQELMRPHVFPFPLLMRVLNLSRVIDVFY-RYQDAYTNPKLLKEHIVSLLIETIPI 547          
BLAST of EY756852 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 44/126 (34.92%), Postives = 70/126 (55.56%), Query Frame = 1
Query:   16 FECILKNAKSLKATETIGRLMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTH-SLMMKRQVALLLTEPLAI 390
            F+    + K ++A+  I R MDD+A +KF+ +R  + SA+ECY  ++GV+             ++WKD+N+E L PT +P  +L R L  AR    +Y +G D YT+     K  +  LL EP+A+
Sbjct:  430 FKWAASDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDLNQEFLKPTEMPTEVLNRSLNLARVMDVLYREG-DGYTYVGKAAKGGITSLLIEPIAL 554          
BLAST of EY756852 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.642e-14
Identity = 44/126 (34.92%), Postives = 70/126 (55.56%), Query Frame = 1
Query:   16 FECILKNAKSLKATETIGRLMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTH-SLMMKRQVALLLTEPLAI 390
            F+    + K ++A+  I R MDD+A +KF+ +R  + SA+ECY  ++GV+             ++WKD+N+E L PT +P  +L R L  AR    +Y +G D YT+     K  +  LL EP+A+
Sbjct:  430 FKWAANDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDVNKEFLKPTEMPTEVLNRSLNLARVMDVLYREG-DGYTYVGKAAKGGITSLLIEPVAL 554          
BLAST of EY756852 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.145e-14
Identity = 44/126 (34.92%), Postives = 69/126 (54.76%), Query Frame = 1
Query:   16 FECILKNAKSLKATETIGRLMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTH-SLMMKRQVALLLTEPLAI 390
            F+    + K ++A+  I R MDD+A +KF+ +R  + SA+ECY  ++GVS             ++WKD+N+E   PT +P  +L R L  AR    +Y +G D YT+     K  +  LL EP+A+
Sbjct:  430 FKWAANDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVSAQEAYDVFNKHVESAWKDVNQEFQKPTEMPTEVLNRSLNLARVMDVLYREG-DGYTYVGKAAKGGITSLLIEPIAL 554          
BLAST of EY756852 vs. ExPASy Swiss-Prot
Match: DCS1_GOSHI ((+)-delta-cadinene synthase OS=Gossypium hirsutum GN=CDN1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.816e-13
Identity = 42/126 (33.33%), Postives = 68/126 (53.97%), Query Frame = 1
Query:   16 FECILKNAKSLKATETIGRLMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTH-SLMMKRQVALLLTEPLAI 390
            F+    + K ++A+  I R MDD+  +KF+ +R  + SA+ECY  ++GV+             ++WKD+N+  L PT +P  +L R L  AR    +Y +G D YT+     K  +  LL EP+A+
Sbjct:  430 FKWAANDPKIIQASTIICRFMDDVTEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDVNQGFLKPTEMPTEVLNRSLNLARVMDVLYREG-DGYTYVGKAAKGGITSLLIEPIAL 554          
BLAST of EY756852 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.046e-13
Identity = 43/128 (33.59%), Postives = 66/128 (51.56%), Query Frame = 1
Query:    7 VRNFECILKNAKSLKATETIGRLMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTHSLMMKRQVALLLTEPLAI 390
            +  F+ +  N K   A+    RL++D+  +  EQ+RGH  S ++CY NQHGVS             + WK+INEE +  + V +  L R++  AR     Y  G D YT S  +K+ V  L  +P++I
Sbjct:  475 LNEFQWLETNPKLSYASGAFIRLVNDLTSHVTEQQRGHVASCIDCYMNQHGVSKDEAVKILQKMATDCWKEINEECMRQSQVSVGHLMRIVNLARLTDVSYKYG-DGYTDSQQLKQFVKGLFVDPISI 601          
BLAST of EY756852 vs. ExPASy Swiss-Prot
Match: 5EAS_TOBAC (Aristolochene synthase OS=Nicotiana tabacum GN=EAS3 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 5.284e-13
Identity = 44/128 (34.38%), Postives = 64/128 (50.00%), Query Frame = 1
Query:   10 RNFECILKNAKSLKATETIGRLMDDIAGYKFEQKRGHNPSAVECYKNQHGVSXXXXXXXXXXXXXNSWKDINEELLNPTTVPLPMLQRLLYFARSGHFIYDDGHDRYTH-SLMMKRQVALLLTEPLAI 390
            ++FE + KN K L+A+  I R++DD A Y+ E+ RG   + +EC    +G+S              +WKDINE LL PT V    L  +L  AR     Y    D YTH   ++K  +  LL + + I
Sbjct:  421 QDFEWLSKNPKILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILNLARIVEVTYIHNLDGYTHPEKVLKPHIINLLVDSIKI 548          
The following BLAST results are available for this feature:
BLAST of EY756852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
DCS3_GOSAR7.877e-1739.68(+)-delta-cadinene synthase isozyme A OS=Gossypium... [more]
HUMS_ARATH8.709e-1635.20Alpha-humulene/(-)-(E)-beta-caryophyllene synthase... [more]
DCS1_GOSAR1.258e-1434.92(+)-delta-cadinene synthase isozyme XC1 OS=Gossypi... [more]
DCS2_GOSAR1.642e-1434.92(+)-delta-cadinene synthase isozyme XC14 OS=Gossyp... [more]
DCS4_GOSAR2.145e-1434.92(+)-delta-cadinene synthase isozyme C2 OS=Gossypiu... [more]
DCS1_GOSHI1.816e-1333.33(+)-delta-cadinene synthase OS=Gossypium hirsutum ... [more]
CASS_RICCO4.046e-1333.59Casbene synthase, chloroplastic OS=Ricinus communi... [more]
5EAS_TOBAC5.284e-1334.38Aristolochene synthase OS=Nicotiana tabacum GN=EAS... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-D07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756852 ID=EY756852; Name=EY756852; organism=Citrus sinensis; type=EST; length=608bp
CCACGCGTCCGCAATTTTGAATGCATTCTTAAAAACGCTAAGAGTCTTAA
AGCGACAGAAACCATTGGCAGGCTCATGGATGACATAGCAGGTTATAAGT
TTGAGCAGAAGAGAGGACATAATCCCTCAGCAGTTGAGTGCTACAAGAAT
CAACATGGCGTCTCCGAGGAAGAGGCAGTTAAAGAGTTGTTGTTAGAAGT
TGCTAACAGTTGGAAAGATATAAATGAGGAGCTTCTCAACCCAACGACTG
TCCCGTTACCTATGCTTCAACGGCTTCTTTATTTCGCACGTTCAGGCCAT
TTTATCTACGACGATGGTCATGATCGCTACACCCATTCATTGATGATGAA
ACGCCAAGTTGCCTTGTTGCTGACGGAACCCCTTGCGATCTGAAGATTAA
CGTCATGCTATTGATTTTCCATCGGATATATTTGAGCAGTTGTAATAAAT
GAAGGTCGCGCTGGCTATTTAGCTAGCTACTCATGCCTGGCTAATAAATG
TGTCGCCAAATAATATGGTTTCAAATTGTGGTCCTTTTAGTTAAAAAATT
AATAATAAAATATTTTTCTTCTAAAANANAANANNNNNNNANAAAAAAAA
AAAANNNG
back to top