EY756821
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756821 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.401e-18 Identity = 57/108 (52.78%), Postives = 68/108 (62.96%), Query Frame = 3 Query: 12 VSSSPLDAGVVPDGNSMSDISYHLAEI*ALGPAPIQASP--YRLLVLTTASQLCGIDREAIVLRYREKTKNRKFEKTILYHSRKAYAETTPII*GRLAKRAEGDSEVD 329 VSSS ++ GVVPDG S++D+SY GPA A P R + LT+A +REA V+RYREK KNRKFEKTI Y SRKAYAE P I GR AKR + + D Sbjct: 249 VSSSSMEVGVVPDGGSVADVSYPYG-----GPATSGADPGTQRAVPLTSA------EREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESND 345
BLAST of EY756821 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.293e-17 Identity = 62/132 (46.97%), Postives = 80/132 (60.61%), Query Frame = 3 Query: 12 VSSSPLDAGVVPDGNSMSDISYHLAEI*ALGPAPIQASPYRLLVLTTAS--QLCGIDREAIVLRYREKTKNRKFEKTILYHSRKAYAETTPII*GRLAKRAEGDSEVDRLYKSATSAAGAYLADSQYGVVPS 401 VS+S ++ GVVPDGN+ + ++ + I +S TT Q +DREA VLRYREK KNRKFEKTI Y SRKAYAE+ P I GR AKR E +E D ++ S A+ A+ +QYGVVP+ Sbjct: 245 VSTSSIEYGVVPDGNTNNSVNR----------STITSS-------TTGGDHQASSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTE--TENDDIFLSHVYASAAH---AQYGVVPT 354
BLAST of EY756821 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14 Identity = 51/129 (39.53%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 15 SSSPLDAGVVPDGNSMSDISYHLAEI*ALGPAPIQASPYRLLVLTTASQLCGIDREAIVLRYREKTKNRKFEKTILYHSRKAYAETTPII*GRLAKRAEGDSEVDRLYKSATSAAGAYLADSQYGVVPS 401 S S +D VVP+ + SDI+ + P +++ QL ++REA VLRYREK K RKF+KTI Y SRKAYAE P I GR AKR E ++E + ++ + + ++++ YG+VPS Sbjct: 230 SVSSMDISVVPESTA-SDITVQHPRTTKETIDQLSGPPTQVV-----QQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIFST------SLMSETGYGIVPS 346
BLAST of EY756821 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.638e-14 Identity = 54/130 (41.54%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 12 VSSSPLDAGVVPDGNSMSDISYHLAEI*ALGPAPIQASPYRLLVLTTASQLCGIDREAIVLRYREKTKNRKFEKTILYHSRKAYAETTPII*GRLAKRAEGDSEVDRLYKSATSAAGAYLADSQYGVVPS 401 V+ S +D GVVP+ + + A+ P PY A L DREA VLRYREK K RKFEKTI Y SRKAYAE P I GR AK+ + D E ++ + + + D+ YG+VPS Sbjct: 240 VNVSSMDLGVVPESTTSDATVSNPRSPKAVTDQP----PY-----PPAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAFSTMIT------FDTGYGIVPS 354
BLAST of EY756821 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.339e-13 Identity = 49/127 (38.58%), Postives = 68/127 (53.54%), Query Frame = 3 Query: 21 SPLDAGVVPDGNSMSDISYHLAEI*ALGPAPIQASPYRLLVLTTASQLCGIDREAIVLRYREKTKNRKFEKTILYHSRKAYAETTPII*GRLAKRAEGDSEVDRLYKSATSAAGAYLADSQYGVVPS 401 S ++ GVVP+ + + H ++ P + T +QL +DREA VLRYREK K RKFEKTI Y SRKAYAE P + GR AKR E++ + + + ++ YG+VPS Sbjct: 258 SSMETGVVPESTACVTTASHPRT----PKGTVEQQPDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR-----EIEAEEQGFNT---MLMYNTGYGIVPS 372
BLAST of EY756821 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.115e-12 Identity = 45/85 (52.94%), Postives = 49/85 (57.65%), Query Frame = 3 Query: 147 TTASQLCGIDREAIVLRYREKTKNRKFEKTILYHSRKAYAETTPII*GRLAKRAEGDSEVDRLYKSATSAAGAYLADSQYGVVPS 401 T A QL +REA VLRYREK KNRKFEKTI Y SRKAYAE P I GR AKR + S + G +GVVPS Sbjct: 219 TPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD----------SRENDGGDVGVYGGFGVVPS 293 The following BLAST results are available for this feature:
BLAST of EY756821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756821 ID=EY756821; Name=EY756821; organism=Citrus sinensis; type=EST; length=730bpback to top |