EY756812

Overview
NameEY756812
Unique NameEY756812
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13356 contig Csv1_Contig13356:1..716. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY756812 vs. ExPASy Swiss-Prot
Match: CSK21_ARATH (Casein kinase II subunit alpha-1 OS=Arabidopsis thaliana GN=CKA1 PE=1 SV=2)

HSP 1 Score: 261.151 bits (666), Expect = 4.101e-69
Identity = 124/135 (91.85%), Postives = 131/135 (97.04%), Query Frame = 3 
Query:   12 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIARVLGTDELNAYLDKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVRAAENSRVRA 416
            LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIA+VLGTDELNAYL+KY LELDPQLEALVGRHSRKPWS+FIN+DNQHLVSPEAIDFLDKLLRYDHQDRLTA+EAMAH YF QVRAAE SR+R+
Sbjct:  198 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLNKYQLELDPQLEALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAKEAMAHAYFAQVRAAETSRMRS 332
[Close]
BLAST of EY756812 vs. ExPASy Swiss-Prot
Match: CSK22_ARATH (Casein kinase II subunit alpha-2 OS=Arabidopsis thaliana GN=CKA2 PE=2 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 2.658e-68
Identity = 122/134 (91.04%), Postives = 131/134 (97.76%), Query Frame = 3 
Query:   12 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIARVLGTDELNAYLDKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVRAAENSRVR 413
            LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIA+VLGTDELNAYL+KY LELD QLEALVGRHSRKPWS+FIN+DN+HLVSPEAID+LDKLLRYDHQDRLTA+EAMAHPYF QVRAAE+SR+R
Sbjct:  198 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLNKYQLELDTQLEALVGRHSRKPWSKFINADNRHLVSPEAIDYLDKLLRYDHQDRLTAKEAMAHPYFAQVRAAESSRMR 331
[Close]
BLAST of EY756812 vs. ExPASy Swiss-Prot
Match: CSK2A_MAIZE (Casein kinase II subunit alpha OS=Zea mays GN=ACK2 PE=1 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.459e-66
Identity = 119/135 (88.15%), Postives = 126/135 (93.33%), Query Frame = 3 
Query:   12 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIARVLGTDELNAYLDKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVRAAENSRVRA 416
            LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN DQLVKIA+VLGTD LN YL+KY +ELDPQLEALVGRHSRKPW +F+N+DNQHLVSPEAIDFLDKLLRYDHQ+RLTA EAM HPYF QVRAAENSR RA
Sbjct:  198 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAENSRTRA 332
[Close]
BLAST of EY756812 vs. ExPASy Swiss-Prot
Match: CSK23_ARATH (Probable casein kinase II subunit alpha OS=Arabidopsis thaliana GN=At2g23080 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.365e-64
Identity = 116/134 (86.57%), Postives = 127/134 (94.78%), Query Frame = 3 
Query:   12 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIARVLGTDELNAYLDKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVRAAENSRVR 413
            LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDN DQLVKIA+VLGT+EL+ YL+KY L+LDPQLEALVGRH  KPWS+FIN+DNQHLVSPEAIDFLDKLL+YDHQDRLTAREAM HPYF QV+AAE+SR+R
Sbjct:  198 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTNELDHYLNKYQLDLDPQLEALVGRHVPKPWSKFINADNQHLVSPEAIDFLDKLLQYDHQDRLTAREAMDHPYFAQVKAAESSRLR 331
[Close]
BLAST of EY756812 vs. ExPASy Swiss-Prot
Match: CSK21_RAT (Casein kinase II subunit alpha OS=Rattus norvegicus GN=Csnk2a1 PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.084e-53
Identity = 95/125 (76.00%), Postives = 110/125 (88.00%), Query Frame = 3 
Query:   12 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIARVLGTDELNAYLDKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQV 386
            LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN DQLV+IA+VLGT++L  Y+DKY++ELDP+   ++GRHSRK W RF++S+NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HPYFY V
Sbjct:  203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
[Close]
BLAST of EY756812 vs. ExPASy Swiss-Prot
Match: CSK21_RABIT (Casein kinase II subunit alpha OS=Oryctolagus cuniculus GN=CSNK2A1 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.084e-53
Identity = 95/125 (76.00%), Postives = 110/125 (88.00%), Query Frame = 3 
Query:   12 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIARVLGTDELNAYLDKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQV 386
            LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN DQLV+IA+VLGT++L  Y+DKY++ELDP+   ++GRHSRK W RF++S+NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HPYFY V
Sbjct:  203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
[Close]
BLAST of EY756812 vs. ExPASy Swiss-Prot
Match: CSK21_HUMAN (Casein kinase II subunit alpha OS=Homo sapiens GN=CSNK2A1 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.084e-53
Identity = 95/125 (76.00%), Postives = 110/125 (88.00%), Query Frame = 3 
Query:   12 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIARVLGTDELNAYLDKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQV 386
            LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN DQLV+IA+VLGT++L  Y+DKY++ELDP+   ++GRHSRK W RF++S+NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HPYFY V
Sbjct:  203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
[Close]
BLAST of EY756812 vs. ExPASy Swiss-Prot
Match: CSK21_BOVIN (Casein kinase II subunit alpha OS=Bos taurus GN=CSNK2A1 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.084e-53
Identity = 95/125 (76.00%), Postives = 110/125 (88.00%), Query Frame = 3 
Query:   12 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIARVLGTDELNAYLDKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQV 386
            LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN DQLV+IA+VLGT++L  Y+DKY++ELDP+   ++GRHSRK W RF++S+NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HPYFY V
Sbjct:  203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
[Close]
BLAST of EY756812 vs. ExPASy Swiss-Prot
Match: CSK2A_DROME (Casein kinase II subunit alpha OS=Drosophila melanogaster GN=CkIIalpha PE=1 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.416e-53
Identity = 96/125 (76.80%), Postives = 110/125 (88.00%), Query Frame = 3 
Query:   12 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIARVLGTDELNAYLDKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQV 386
            LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN DQLV+IA+VLGT+EL AYLDKY+++LDP+   ++ RHSRK W RF++SDNQHLVSPEA+DFLDKLLRYDH DRLTAREAMAHPYF  +
Sbjct:  201 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELYAYLDKYNIDLDPRFHDILQRHSRKRWERFVHSDNQHLVSPEALDFLDKLLRYDHVDRLTAREAMAHPYFLPI 325
[Close]
BLAST of EY756812 vs. ExPASy Swiss-Prot
Match: CSK21_CHICK (Casein kinase II subunit alpha OS=Gallus gallus GN=CSNK2A1 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.416e-53
Identity = 94/125 (75.20%), Postives = 110/125 (88.00%), Query Frame = 3 
Query:   12 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIARVLGTDELNAYLDKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQV 386
            LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN DQLV+IA+VLGT++L  Y+DKY++ELDP+   ++GRHSRK W RF++S+NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HPYFY +
Sbjct:  203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYPI 327
The following BLAST results are available for this feature:
BLAST of EY756812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
CSK21_ARATH4.101e-6991.85Casein kinase II subunit alpha-1 OS=Arabidopsis th... [more]
CSK22_ARATH2.658e-6891.04Casein kinase II subunit alpha-2 OS=Arabidopsis th... [more]
CSK2A_MAIZE1.459e-6688.15Casein kinase II subunit alpha OS=Zea mays GN=ACK2... [more]
CSK23_ARATH1.365e-6486.57Probable casein kinase II subunit alpha OS=Arabido... [more]
CSK21_RAT1.084e-5376.00Casein kinase II subunit alpha OS=Rattus norvegicu... [more]
CSK21_RABIT1.084e-5376.00Casein kinase II subunit alpha OS=Oryctolagus cuni... [more]
CSK21_HUMAN1.084e-5376.00Casein kinase II subunit alpha OS=Homo sapiens GN=... [more]
CSK21_BOVIN1.084e-5376.00Casein kinase II subunit alpha OS=Bos taurus GN=CS... [more]
CSK2A_DROME1.416e-5376.80Casein kinase II subunit alpha OS=Drosophila melan... [more]
CSK21_CHICK1.416e-5375.20Casein kinase II subunit alpha OS=Gallus gallus GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-H11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756812 ID=EY756812; Name=EY756812; organism=Citrus sinensis; type=EST; length=716bp
CCACGCGTCCGCTTGTTGATTTGCAAGACTATGACTATTCATTGGACATG
TGGAGCCTCGGCTGTATGTTTGCAGGAATGATTTTTCGCAAGGAACCATT
CTTTTATGGTCATGACAATCAAGACCAGCTTGTCAAAATTGCAAGGGTTC
TGGGAACCGATGAGTTAAATGCATACTTGGACAAATATCATTTAGAGCTT
GATCCGCAGCTTGAAGCTCTAGTTGGAAGGCATAGCAGGAAGCCATGGTC
CAGATTCATTAATTCAGATAATCAGCATCTAGTTTCCCCAGAGGCCATTG
ATTTTCTTGATAAGCTTCTTCGCTATGATCACCAGGACAGGCTTACAGCC
AGAGAGGCAATGGCTCATCCTTATTTCTATCAAGTGAGGGCTGCAGAAAA
TAGCAGAGTGCGCGCGCATTAGCTCCATGCTTAGTCCCTTCCTGAGTATA
CTTGTATTTCATTTGGGCCCATTCTTATGGATGGAGTATATTTCTGGTCT
ATTGATAAGTCGTTGTACCAGTAGTCTATAGCTCGCATCCATATTTTCAG
ATGGTCTATTGACAAGTAGTTGGTAGTATACTTGTATTTCATTTGAGCTT
TAATGTTGCTCGTGTGGACTGTACAGCTTGTTCCGTTGTGTTTGCCTTAT
ACATGTCAATTATTTGTACAAAATTACAGATAATAACTTGTTCTTTTGAT
GTGGTCAAAANANNNN
back to top