EY756811

Overview
NameEY756811
Unique NameEY756811
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11761 contig Csv1_Contig11761:909..1481. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY756811 vs. ExPASy Swiss-Prot
Match: TRPD_ARATH (Anthranilate phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.805e-26
Identity = 59/93 (63.44%), Postives = 67/93 (72.04%), Query Frame = 1 
Query:   13 KIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 291
            KIE FSFDPLD+GIPRCTLE L+GGGP YNA+VLRRVLSGE G               VS +V TLAEGV +ARE+Q SGKA+ TLD WI +S
Sbjct:  345 KIEEFSFDPLDFGIPRCTLEDLRGGGPDYNADVLRRVLSGESGAIADSLILNAAAALLVSNRVQTLAEGVTVAREVQSSGKAIKTLDSWINIS 437
[Close]
BLAST of EY756811 vs. ExPASy Swiss-Prot
Match: TRPD_EUBR3 (Anthranilate phosphoribosyltransferase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=trpD PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.678e-11
Identity = 35/85 (41.18%), Postives = 49/85 (57.65%), Query Frame = 1 
Query:   37 PLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 291
            P D+G  RCT E L+GG P  NA+++R +L G++G               +  K +++ EG+ LA EI  SGKAL TLD  I+VS
Sbjct:  252 PEDFGFERCTKEDLKGGTPEENAKIVRDILGGQKGHKRNAVLMNAGASLYIGGKADSMKEGIELAAEIIDSGKALETLDKLIDVS 336
The following BLAST results are available for this feature:
BLAST of EY756811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
TRPD_ARATH2.805e-2663.44Anthranilate phosphoribosyltransferase, chloroplas... [more]
TRPD_EUBR35.678e-1141.18Anthranilate phosphoribosyltransferase OS=Eubacter... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-H10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756811 ID=EY756811; Name=EY756811; organism=Citrus sinensis; type=EST; length=574bp
CCACGCGTCCGAAAAATTGAGAGATTCTCATTTGATCCATTGGACTACGG
CATTCCGCGCTGCACTTTAGAAAGCTTGCAAGGTGGAGGCCCAGCATATA
ATGCAGAGGTCTTAAGGCGTGTACTGTCTGGAGAAAGAGGGGCAATAGCT
GATGCATTAATCCTAAATGCTGCAGCAGCGCTGTTGGTCAGTTGCAAAGT
GAACACCTTGGCTGAGGGTGTAGCCCTGGCACGTGAAATTCAATTATCAG
GGAAAGCTCTTAATACACTGGATTTATGGATAGAAGTCTCAAAGGGGGCG
CCAGCATTTGCTTGTGCATGAGTAATGGAGTTTTGAAGCCTAAGAAAGAC
TTCATTGCAGTACCATGAATAACAGGTAGGTCAAAAGTTGGCTTGCTTAT
GCACGTCTTGTCGATCAACTATTAGAAGAAATTAGAAGGTCCCTAAAATT
AATATTGTTTATTGTAGTATATCAAAAGTATTGGCTTATGGAATGTATTA
TGTTATGTTGAATACATTTTTTGGCACAAAGTCAAATGAAGTATAATTAT
TTTTGCTAAAAAAAAAAAAAAAAA
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