EY756789

Overview
NameEY756789
Unique NameEY756789
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY756789 vs. ExPASy Swiss-Prot
Match: PRA1H_ARATH (PRA1 family protein H OS=Arabidopsis thaliana GN=PRA1H PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.324e-22
Identity = 53/84 (63.10%), Postives = 64/84 (76.19%), Query Frame = 3 
Query:   42 LLG*YQVWHFGIFFKFCSDKWKWDRHPVIRQVLVRIAQCATLVVLMLLNVQMALFCALAISYVVMILHAAFRKLSASKQPSRIR 293
            LLG   +W     FK+CSDKWK+DRHP +R++ + I QCAT V+L  LNVQMALF ALAISY VMILHA FRKL+ SK+P+R R
Sbjct:  161 LLGSLALWEL---FKYCSDKWKFDRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSVMILHAGFRKLTPSKKPTRGR 241
The following BLAST results are available for this feature:
BLAST of EY756789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PRA1H_ARATH5.324e-2263.10PRA1 family protein H OS=Arabidopsis thaliana GN=P... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-F11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756789 ID=EY756789; Name=EY756789; organism=Citrus sinensis; type=EST; length=881bp
CCTCTTCTTTGCTTGCTCTCTATACCAGATGCCACTTGCTCTTGTTGGGT
TGATATCAAGTTTGGCACTTTGGGATTTTTTTCAAGTTCTGTAGTGACAA
ATGGAAGTGGGATCGGCATCCTGTGATTAGGCAGGTTCTGGTTCGCATTG
CACAATGTGCTACATTGGTTGTTCTTATGCTTCTGAATGTTCAGATGGCT
CTATTCTGTGCACTTGCTATCAGTTATGTTGTCATGATTTTGCATGCTGC
ATTTCGTAAGCTCTCTGCTTCAAAGCAACCTTCTCGGATCAGATGAAATC
CGATTTTCCAAACAAAGGTTCCTCATTGAAGAAATTTAAAGATTCGGAAG
CAATTAGCTCATAAGACTTCTACAGAAGCAATGAAGAGCAGGGTACCCTA
TAAAAGATGAGAAATTACTGCAACAAAACCTCGAAAGGGAGTGAGATGAT
CATACTGGTGGTGTACTCCACTCGGGCACAATCCATAGTCATTTTGTCAC
CTCAACGGGAGGACATGACTCCTGCAACATGTGTGTTGTTTGATATTTCC
ATGCCGGCAGTTGATGCTCAACCGGAATCAAAAGCAGTCACTTGTAAAAG
CAATGCCGACTGTGACAATCCCTGTCAGTCGTTTCGAATGCGATCTTGAT
ACCCATCTCTGCGTTTGTGTTCGTGGCCGCAATTCGACGGGTTGTTGAAG
AGATTAAAGCTTGTATTGCAAGTTCTAGTGATATTTTGGATGCTNGATTG
CNAAATTTGTAACGTTACAATCTTTGNTCCCGTTCTTACATCATATGTCA
AATAAAGTATCAACTAAGATTGCTGCCCTCAAAAAAAAAAAAAAAAAAAA
AAAAAAAGGGCGCCGCTCTAGAGATCCAGCT
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