EY756767

Overview
NameEY756767
Unique NameEY756767
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length462
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3986 contig Csv1_Contig3986:413..874. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756767 vs. ExPASy Swiss-Prot
Match: RL112_ARATH (60S ribosomal protein L11-2 OS=Arabidopsis thaliana GN=RPL11B PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 8.156e-18
Identity = 44/65 (67.69%), Postives = 47/65 (72.31%), Query Frame = 3
Query:   15 IRYHPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNKSQNI 209
            I+Y PSTGIYGMDF+VVLE                 IQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct:  116 IKYDPSTGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180          
BLAST of EY756767 vs. ExPASy Swiss-Prot
Match: RL111_ARATH (60S ribosomal protein L11-1 OS=Arabidopsis thaliana GN=RPL11A PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 8.156e-18
Identity = 44/65 (67.69%), Postives = 47/65 (72.31%), Query Frame = 3
Query:   15 IRYHPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNKSQNI 209
            I+Y PSTGIYGMDF+VVLE                 IQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct:  116 IKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180          
BLAST of EY756767 vs. ExPASy Swiss-Prot
Match: RL11_MEDSA (60S ribosomal protein L11 OS=Medicago sativa GN=RPL11 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.099e-17
Identity = 44/65 (67.69%), Postives = 46/65 (70.77%), Query Frame = 3
Query:   15 IRYHPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNKSQNI 209
            I+Y PSTGIYGMDFFVVLE                 IQHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct:  116 IKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI 180          
BLAST of EY756767 vs. ExPASy Swiss-Prot
Match: RL11_ORYSJ (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica GN=RPL11 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.178e-16
Identity = 42/63 (66.67%), Postives = 45/63 (71.43%), Query Frame = 3
Query:   15 IRYHPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNKSQ 203
            I+Y PSTGIYGMDF+VVLE                 IQHRVTKEDAMKWFQVKYEGVILNK+Q
Sbjct:  116 IKYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQ 178          
BLAST of EY756767 vs. ExPASy Swiss-Prot
Match: RL11_ORYSI (60S ribosomal protein L11 OS=Oryza sativa subsp. indica GN=RPL11 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 1.178e-16
Identity = 42/63 (66.67%), Postives = 45/63 (71.43%), Query Frame = 3
Query:   15 IRYHPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNKSQ 203
            I+Y PSTGIYGMDF+VVLE                 IQHRVTKEDAMKWFQVKYEGVILNK+Q
Sbjct:  116 IKYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQ 178          
BLAST of EY756767 vs. ExPASy Swiss-Prot
Match: RL11_CHLRE (60S ribosomal protein L11 OS=Chlamydomonas reinhardtii GN=RPL11 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 8.734e-12
Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = 3
Query:   15 IRYHPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNKS 200
            ++Y PSTGIYGMDF+V LE                 ++H+VTKEDA+KWFQ +++GV+LNK+
Sbjct:  106 LKYDPSTGIYGMDFYVCLERRGYRVARRRKQKAHVGVKHKVTKEDAIKWFQQEFDGVVLNKA 167          
BLAST of EY756767 vs. ExPASy Swiss-Prot
Match: RL11_DROME (60S ribosomal protein L11 OS=Drosophila melanogaster GN=RpL11 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.490e-11
Identity = 32/60 (53.33%), Postives = 38/60 (63.33%), Query Frame = 3
Query:   15 IRYHPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILN 194
            I+Y PS GIYG+DF+VVL                   QHR+TKEDAMKWFQ KY+G+ILN
Sbjct:  122 IKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILN 181          
The following BLAST results are available for this feature:
BLAST of EY756767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
RL112_ARATH8.156e-1867.6960S ribosomal protein L11-2 OS=Arabidopsis thalian... [more]
RL111_ARATH8.156e-1867.6960S ribosomal protein L11-1 OS=Arabidopsis thalian... [more]
RL11_MEDSA3.099e-1767.6960S ribosomal protein L11 OS=Medicago sativa GN=RP... [more]
RL11_ORYSJ1.178e-1666.6760S ribosomal protein L11 OS=Oryza sativa subsp. j... [more]
RL11_ORYSI1.178e-1666.6760S ribosomal protein L11 OS=Oryza sativa subsp. i... [more]
RL11_CHLRE8.734e-1248.3960S ribosomal protein L11 OS=Chlamydomonas reinhar... [more]
RL11_DROME1.490e-1153.3360S ribosomal protein L11 OS=Drosophila melanogast... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-D10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756767 ID=EY756767; Name=EY756767; organism=Citrus sinensis; type=EST; length=462bp
CCACGCGTCCGCTTATTAGGTATCACCCTTCCACAGGTATTTATGGCATG
GACTTCTTTGTTGTCCTTGAACGCCCTGGATACCGTGTTGGTCGTCGCCG
CAGATGCAAGTCTCGCGTTGGCATCCAACATAGAGTTACAAAGGAGGATG
CCATGAAATGGTTTCAAGTGAAATATGAAGGAGTTATCCTTAACAAGTCC
CAAAACATTGGTGCTTAAGGCGATCTTTGAAACCTGTTGAGTTTTTTTTT
TCCCTTAAGTTTTGGGCAGCTGCCCGATTTTTGTTTATTAGAATCTATAT
TTTCCTTTGGAGTTTTGAGTTGGTGGATTTTTTTAAGCACAATTTGCCGT
GGTTGCCCTGTTCTTTTATTAGAATAATGGTAAAGGCAATTATTTTTCTT
TTGAAAATTTCATTTAAGTTCTTTTAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA
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