EY756766

Overview
NameEY756766
Unique NameEY756766
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756766 vs. ExPASy Swiss-Prot
Match: VP221_ARATH (Vacuolar protein sorting-associated protein 22 homolog 1 OS=Arabidopsis thaliana GN=VP22-1 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 4.108e-62
Identity = 112/149 (75.17%), Postives = 131/149 (87.92%), Query Frame = 3
Query:   12 QIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISVGKKKLVRSVPTELNKDHNQILELAQAQGFVTVDEVERHLSWTSGRAIDVLDILLEEGLAMVDDGHRDRKRRYWFPCVXXXXXXLGADS 458
            QI+E+C+ TR HNGGLI+LQELCN LRQRRK +REAV+EDDCLRAISKLKVLG+G+EVI++GKKKLVRSVPTELNKDHNQILELAQ QGFV V+EV+R LSWTSGR ID L+ LLEEGLAM+D+GH+D K RYWFPCV      +G+D+
Sbjct:  102 QIIEVCMLTRSHNGGLISLQELCNHLRQRRKKDREAVTEDDCLRAISKLKVLGSGFEVITIGKKKLVRSVPTELNKDHNQILELAQGQGFVIVEEVQRRLSWTSGRVIDALETLLEEGLAMIDNGHKDGKCRYWFPCVSSVYSSIGSDT 250          
BLAST of EY756766 vs. ExPASy Swiss-Prot
Match: VP222_ARATH (Putative vacuolar protein sorting-associated protein 22 homolog 2 OS=Arabidopsis thaliana GN=VP22-2 PE=5 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.349e-33
Identity = 67/85 (78.82%), Postives = 79/85 (92.94%), Query Frame = 3
Query:   12 QIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISVGKKKLVRSVPTELNKDHNQILELA 266
            QI+E+C+ TR HNGGLI+LQELCN LRQRRK++REAV+EDDCLRAISKLK+LG+ +EVI++GKKK VRSVPTELNKDHN ILELA
Sbjct:   33 QIIEVCMLTRSHNGGLISLQELCNHLRQRRKTDREAVTEDDCLRAISKLKLLGSRFEVITIGKKKFVRSVPTELNKDHNHILELA 117          
BLAST of EY756766 vs. ExPASy Swiss-Prot
Match: SNF8_XENTR (Vacuolar-sorting protein SNF8 OS=Xenopus tropicalis GN=snf8 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.872e-31
Identity = 69/138 (50.00%), Postives = 95/138 (68.84%), Query Frame = 3
Query:   12 QIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISVGKKKLVRSVPTELNKDHNQILELAQAQGFVTVDEVERHLSWTSGRAIDVLDILLEEGLAMVDDGHRDRKRRYWFPCV 425
            QI+E+CLA + HNGGLI L EL   + + R    + VS+DD +RAI KLKVLGNG+ +I VG   LV+SVP ELN DH  +L+LA+ +GFVTV+E++  L+W + RA  VL+ LL+EGLA + D     + +YW P +
Sbjct:  103 QIIEVCLALKHHNGGLITLAELHQHVLKGRGKLAQDVSQDDIIRAIKKLKVLGNGFGIIPVGGSYLVQSVPAELNMDHTVVLQLAEKKGFVTVNEIKSSLNWETERAKHVLEHLLKEGLAWI-DSQAQGEAQYWLPAL 239          
BLAST of EY756766 vs. ExPASy Swiss-Prot
Match: SNF8_DANRE (Vacuolar-sorting protein SNF8 OS=Danio rerio GN=snf8 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 5.988e-29
Identity = 66/138 (47.83%), Postives = 90/138 (65.22%), Query Frame = 3
Query:   12 QIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISVGKKKLVRSVPTELNKDHNQILELAQAQGFVTVDEVERHLSWTSGRAIDVLDILLEEGLAMVDDGHRDRKRRYWFPCV 425
            QI+E+CLA +  NGGLI L EL + + + R    + VS+DD +RAI KLK +GNG+ +I VG   LV+SVP ELN DH  +L+LA+ +G+VTV E+   L W   RA  VLD LL+EGLA + D     + +YW P +
Sbjct:  103 QIIEVCLALKHRNGGLITLDELHHRVLKGRGKFAQDVSQDDLVRAIKKLKAMGNGFGMIPVGGTYLVQSVPAELNMDHTVVLQLAEKKGYVTVSEIRESLKWEKERACHVLDHLLKEGLAWL-DSQAAGEPQYWLPAL 239          
BLAST of EY756766 vs. ExPASy Swiss-Prot
Match: SNF8_RAT (Vacuolar-sorting protein SNF8 OS=Rattus norvegicus GN=Snf8 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.620e-28
Identity = 64/138 (46.38%), Postives = 89/138 (64.49%), Query Frame = 3
Query:   12 QIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISVGKKKLVRSVPTELNKDHNQILELAQAQGFVTVDEVERHLSWTSGRAIDVLDILLEEGLAMVDDGHRDRKRRYWFPCV 425
            QI+E+CLA +  NGGLI L+EL   + + R    + VS+DD +RAI KLK LG G+ +I VG   L++SVP ELN DH  +L+LA+  G+VTV E++  L W + RA  VL+ LL+EGLA + D     +  YW P +
Sbjct:  103 QIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWL-DLQAPGEAHYWLPAL 239          
BLAST of EY756766 vs. ExPASy Swiss-Prot
Match: SNF8_MOUSE (Vacuolar-sorting protein SNF8 OS=Mus musculus GN=Snf8 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.620e-28
Identity = 64/138 (46.38%), Postives = 89/138 (64.49%), Query Frame = 3
Query:   12 QIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISVGKKKLVRSVPTELNKDHNQILELAQAQGFVTVDEVERHLSWTSGRAIDVLDILLEEGLAMVDDGHRDRKRRYWFPCV 425
            QI+E+CLA +  NGGLI L+EL   + + R    + VS+DD +RAI KLK LG G+ +I VG   L++SVP ELN DH  +L+LA+  G+VTV E++  L W + RA  VL+ LL+EGLA + D     +  YW P +
Sbjct:  103 QIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSEIKTSLKWETERARQVLEHLLKEGLAWL-DLQAPGEAHYWLPAL 239          
BLAST of EY756766 vs. ExPASy Swiss-Prot
Match: SNF8_HUMAN (Vacuolar-sorting protein SNF8 OS=Homo sapiens GN=SNF8 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.620e-28
Identity = 64/138 (46.38%), Postives = 89/138 (64.49%), Query Frame = 3
Query:   12 QIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISVGKKKLVRSVPTELNKDHNQILELAQAQGFVTVDEVERHLSWTSGRAIDVLDILLEEGLAMVDDGHRDRKRRYWFPCV 425
            QI+E+CLA +  NGGLI L+EL   + + R    + VS+DD +RAI KLK LG G+ +I VG   L++SVP ELN DH  +L+LA+  G+VTV E++  L W + RA  VL+ LL+EGLA + D     +  YW P +
Sbjct:  103 QIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWL-DLQAPGEAHYWLPAL 239          
BLAST of EY756766 vs. ExPASy Swiss-Prot
Match: SNF8_DICDI (Vacuolar-sorting protein SNF8 OS=Dictyostelium discoideum GN=snf8 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 9.893e-24
Identity = 63/138 (45.65%), Postives = 85/138 (61.59%), Query Frame = 3
Query:   12 QIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISV-GKKKLVRSVPTELNKDHNQILELAQ-AQGFVTVDEVERHLSWTSGRAIDVLDILLEEGLAMVDDGHRDRKRRYWFP 419
            QI+EICL  R  NGGL+ +  L   LR+ R  N + +S DD   +ISKLKVLGNG+ +I V G KKLV+SVP ELNKDH  I+ LAQ     +T   V   L W+  R  +V++ LL+E +  +D+  +  +  YWFP
Sbjct:  102 QIIEICLKYRSSNGGLMEMDTLAEHLRKLRGKNSQEISCDDIECSISKLKVLGNGFNIIKVSGGKKLVQSVPCELNKDHTDIIILAQDNNASITQSLVISKLKWSEERINNVINFLLQESMIWIDE--QSNETIYWFP 237          
BLAST of EY756766 vs. ExPASy Swiss-Prot
Match: SNF8_SCHPO (Vacuolar-sorting protein dot2 OS=Schizosaccharomyces pombe GN=dot2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.111e-18
Identity = 43/135 (31.85%), Postives = 78/135 (57.78%), Query Frame = 3
Query:   12 QIVEICLATRPHNGGLINLQELCNLLRQRRKS-NREAVSEDDCLRAISKLKVLGNGYEVISVGKKKLVRSVPTELNKDHNQILELAQAQGFVTVDEVERHLSWTSGRAIDVLDILLEEGLAMVDDGHRDRKRRYW 413
            +++E+C AT+  NGGL+++ ++C  L +  ++   E + E D +RA+  L  LG G+ +  +  K+ +RS+P ELN D N +LE  +  G+VT+  +  + +W   R I VL+ L+ + L  +D   +  +  YW
Sbjct:  102 RVIEVCYATQMENGGLLSVSQVCRFLNEENEAFGHEWLRETDVVRAVDSLAPLGPGFVLEKIAGKQYIRSLPLELNTDQNVVLEAVEILGYVTISILRDNYAWERSRCIQVLNDLVSKSLLWIDS--QGVEMAYW 234          
BLAST of EY756766 vs. ExPASy Swiss-Prot
Match: SNF8_YEAST (Vacuolar-sorting protein SNF8 OS=Saccharomyces cerevisiae GN=SNF8 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.340e-12
Identity = 46/136 (33.82%), Postives = 73/136 (53.68%), Query Frame = 3
Query:   12 QIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISVGKKKLVRSVPTELNKDHNQILELAQAQGFVTVDEVERHLSWTSGRAIDVLDILLEEGLAMVDDGHRDRKRRYWFP 419
            +++EIC  T+  NGG+I+ QEL  +    RK N   V  DD  ++I  LK L   +E+  +  KK +RSVP EL  D  +ILE+    G+ ++  ++ +L W + R+   LD ++  GL  + D     +  YW P
Sbjct:   98 KVIEICRQTKDMNGGVISFQELEKV--HFRKLN---VGLDDLEKSIDMLKSL-ECFEIFQIRGKKFLRSVPNELTSDQTKILEICSILGYSSISLLKANLGWEAVRSKSALDEMVANGLLWI-DYQGGAEALYWDP 226          
The following BLAST results are available for this feature:
BLAST of EY756766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VP221_ARATH4.108e-6275.17Vacuolar protein sorting-associated protein 22 hom... [more]
VP222_ARATH2.349e-3378.82Putative vacuolar protein sorting-associated prote... [more]
SNF8_XENTR2.872e-3150.00Vacuolar-sorting protein SNF8 OS=Xenopus tropicali... [more]
SNF8_DANRE5.988e-2947.83Vacuolar-sorting protein SNF8 OS=Danio rerio GN=sn... [more]
SNF8_RAT6.620e-2846.38Vacuolar-sorting protein SNF8 OS=Rattus norvegicus... [more]
SNF8_MOUSE6.620e-2846.38Vacuolar-sorting protein SNF8 OS=Mus musculus GN=S... [more]
SNF8_HUMAN6.620e-2846.38Vacuolar-sorting protein SNF8 OS=Homo sapiens GN=S... [more]
SNF8_DICDI9.893e-2445.65Vacuolar-sorting protein SNF8 OS=Dictyostelium dis... [more]
SNF8_SCHPO8.111e-1831.85Vacuolar-sorting protein dot2 OS=Schizosaccharomyc... [more]
SNF8_YEAST1.340e-1233.82Vacuolar-sorting protein SNF8 OS=Saccharomyces cer... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-D09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756766 ID=EY756766; Name=EY756766; organism=Citrus sinensis; type=EST; length=570bp
CCACGCGTCCGCAAATTGTTGAGATTTGCTTGGCAACAAGACCCCATAAT
GGAGGTCTTATCAACCTCCAGGAACTGTGCAATCTCCTTCGTCAGCGACG
GAAAAGCAATCGTGAAGCTGTGTCTGAGGATGATTGCTTGCGTGCTATAA
GCAAGCTGAAGGTACTGGGTAATGGTTATGAGGTGATTTCTGTTGGAAAG
AAAAAGCTTGTTCGTTCTGTTCCTACTGAGTTGAACAAAGACCATAATCA
AATATTAGAGTTGGCACAGGCTCAAGGTTTTGTAACTGTTGACGAGGTAG
AGAGACATCTTTCCTGGACATCTGGTCGTGCTATTGATGTCCTTGATATT
TTATTAGAGGAAGGTCTTGCAATGGTAGATGATGGCCATAGAGATAGAAA
ACGCCGGTATTGGTTCCCTTGTGTATCTTCCATTTCATCGTCGTTGGGGG
CCGATTCTTAACAATATTTTCTCATTCAGTAACATGTCTTCTTTGTATCC
TTTCCCCTACGGCACTTGGAATTCTGGCATTGTAAAAGGTTCTTTGCTTG
CAAATAGAATATGTTGGTTC
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