EY756709

Overview
NameEY756709
Unique NameEY756709
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3780 contig Csv1_Contig3780:92..1003. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY756709 vs. ExPASy Swiss-Prot
Match: Y1686_ARATH (Uncharacterized membrane protein At1g16860 OS=Arabidopsis thaliana GN=At1g16860 PE=1 SV=1)

HSP 1 Score: 421.394 bits (1082), Expect = 3.546e-117
Identity = 197/262 (75.19%), Postives = 219/262 (83.59%), Query Frame = 3 
Query:    9 PKPVLWLVILIFVMGFIAGGFILGAVHNPXXXXXXXXXXXXXXXXXXWNTCWGRKAITDFISCHPDTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLXGIILRCEDHXN 794
            PKPVLWLV+LIF+MGF+AGGFILGAVHNP                  WN CWGR+ ITDFI+ +PD DLRTAK+GQ VKVTGVVTCGNVPLESSF RVPRCVYTST LYEYR WGSKPAN  HRHFTWGLRS ERHVVDFYISDFQSGLRALVKTGSGA+VTP VDDSVVID K  ++ +SP+F+RWLG+K+L+SDDR+MRLKEGYIKEGSTVSV+G+VQRNDNVLMIVP  EP+A GWQW +C FP SL GI+LRCED  N
Sbjct:  207 PKPVLWLVVLIFIMGFLAGGFILGAVHNPILLVVVAILFTVVAALFIWNICWGRRGITDFIARYPDADLRTAKNGQHVKVTGVVTCGNVPLESSFHRVPRCVYTSTCLYEYRGWGSKPANSSHRHFTWGLRSSERHVVDFYISDFQSGLRALVKTGSGAKVTPLVDDSVVIDFKQGSEQVSPDFVRWLGKKNLTSDDRIMRLKEGYIKEGSTVSVIGVVQRNDNVLMIVPSSEPLAAGWQWRRCTFPTSLEGIVLRCEDSSN 468
The following BLAST results are available for this feature:
BLAST of EY756709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1686_ARATH3.546e-11775.19Uncharacterized membrane protein At1g16860 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-G08-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756709 ID=EY756709; Name=EY756709; organism=Citrus sinensis; type=EST; length=911bp
CCACGCGTCCGAAGCCAGTGTTATGGTTGGTGATTCTGATATTTGTGATG
GGATTTATTGCTGGTGGTTTTATTCTTGGTGCTGTCCACAACCCCATTCT
CCTCATTGTTGTCTTGGTTCTTTTTGCTGTGATTGCTGCAATATTCATTT
GGAATACTTGTTGGGGAAGAAAAGCTATCACAGATTTCATTTCTTGTCAT
CCAGATACTGATCTCCGAACTGCAAAAAGTGGGCAATTTGTGAAGGTCAC
TGGGGTGGTTACCTGTGGTAATGTGCCCCTTGAATCATCATTCCGAAGGG
TTCCTAGATGTGTCTATACGTCAACTAGCTTATATGAGTATCGAGCATGG
GGCTCAAAACCAGCCAACCCTAAACATCGTCATTTTACATGGGGATTGAG
GTCACTGGAGAGGCATGTTGTTGATTTCTACATTTCTGATTTCCAATCTG
GGTTGAGAGCACTGGTTAAGACTGGAAGTGGTGCAAGAGTAACTCCTTTT
GTCGATGATTCTGTTGTTATTGATATTAAACCAGAGAACAAAGACTTGTC
ACCAGAGTTTATAAGGTGGTTGGGACAAAAAAGTCTTTCAAGCGATGATC
GACTGATGCGATTGAAAGAAGGGTACATTAAAGAAGGTAGCACAGTTAGT
GTAATGGGAATCGTTCAGAGAAATGATAATGTCCTAATGATTGTCCCTCC
CCCTGAACCCATAGCAACTGGATGGCAATGGACCAAATGTATCTTTCCAG
CTAGCCTTGANGGTATCATTTTAAGATGTGAAGATCATNNCAACACGATG
TCATCCCTGTCTAGTAAGTAGTATGTGCATCAAAAACTTATTCACGTGTT
ACCCAGTGGAAAATATAGTCTCTCTACTAATTTGATGAGGGGGGGGGGGG
GTTTTGTAATG
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