EY728601

Overview
NameEY728601
Unique NameEY728601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728601 vs. ExPASy Swiss-Prot
Match: Y3264_ARATH (Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 4.697e-45
Identity = 95/165 (57.58%), Postives = 123/165 (74.55%), Query Frame = 3 
Query:   24 KEKSDDDSDMNKPPLMEEITIPSVTELADSLVHFTATT-GDISTVRFDAKKRTIHLPTISFDVNTEVILRNLVAYEASYASGPLVFTRYTELMNGIIDSEEDVKLLMEKGIILNRLKSDAEVANLWNGMSKSIRLTKVPQIDKTIEWCKDMGSRIXGT*WDVVLG 515
            +++S    D+ KPPL+EE+TIPSV++L  + V F  T  G+ISTV FD+     +LP I+ D+NTE +LRNLVAYEA+  SGPLVFTRYTEL+NGIIDSEEDV+LL E+G++++RLKSD E A +WNGMSKS+RLTKV  +DKTIE   D+     G  W V +G
Sbjct:  325 RQESVSILDIEKPPLVEELTIPSVSDLHKAGVRFKPTAHGNISTVTFDSNSGQFYLPVINLDINTETVLRNLVAYEATNTSGPLVFTRYTELINGIIDSEEDVRLLREQGVLVSRLKSDQEAAEMWNGMSKSVRLTKVGFLDKTIE---DVNRYYTGR-WKVKIG 485
The following BLAST results are available for this feature:
BLAST of EY728601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3264_ARATH4.697e-4557.58Putative UPF0481 protein At3g02645 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-A08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728601 ID=EY728601; Name=EY728601; organism=Citrus sinensis; type=EST; length=516bp
CCACGCGTCCGGGGAAAAATGGAAAAGAGAAGTCAGATGATGATAGTGAC
ATGAACAAGCCACCGCTAATGGAAGAAATCACAATCCCTTCAGTCACTGA
GCTTGCCGATTCCCTGGTTCATTTTACAGCCACTACAGGGGACATCTCAA
CCGTCCGTTTCGACGCAAAGAAGCGGACAATACACCTCCCCACCATCAGT
TTTGATGTTAACACAGAGGTGATCTTGAGAAACTTGGTGGCATACGAAGC
ATCATATGCATCCGGACCGCTGGTTTTTACTCGTTACACTGAGTTGATGA
ATGGGATTATTGATTCTGAGGAGGATGTGAAGTTACTTATGGAAAAAGGG
ATCATTTTGAACAGATTGAAGAGTGACGCAGAGGTTGCGAATTTGTGGAA
TGGGATGAGCAAATCAATTAGGTTGACGAAAGTGCCCCAGATTGATAAAA
CTATTGAATGGTGTAAAGACATGGGGAGTAGGATATNAGGAACTTGATGG
GATGTGGTGCTCGGGG
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