EY756682

Overview
NameEY756682
Unique NameEY756682
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756682 vs. ExPASy Swiss-Prot
Match: MRH1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.818e-29
Identity = 59/117 (50.43%), Postives = 92/117 (78.63%), Query Frame = 2
Query:   83 ESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEILSSEAS 433
            E+NV+SFG ++ E+I+G++S+S E GS+E WAS+YL+ +  L +++DP+LK+F+E  LE +  VI+ C+  + +QRPSM+ +A +LK++  + P+ ATP+ SPLWWAELEILSSEA+
Sbjct:  563 EANVHSFGVLMLEIISGKLSFSDEYGSIEQWASKYLEKDD-LGEMIDPSLKTFKEEELEVICDVIRECLKTEQRQRPSMKDVAEQLKQVINITPEKATPRSSPLWWAELEILSSEAT 678          
BLAST of EY756682 vs. ExPASy Swiss-Prot
Match: Y5458_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45840 OS=Arabidopsis thaliana GN=At5g45840 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.064e-28
Identity = 58/117 (49.57%), Postives = 87/117 (74.36%), Query Frame = 2
Query:   83 ESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEILSSEAS 433
            E+NVYSFG ++ E+I+G++S S E GS+  WAS+YL+ +  L+D++DPTL +++E  LE +  V ++C+  D  QRP M+ +  +LKE+  +  + ATP+LSPLWWAELEILSSEA+
Sbjct:  580 ETNVYSFGVLMLEIISGKLSDSEEEGSILKWASKYLENDN-LRDMIDPTLTTYKEEELEAICDVARHCLKLDESQRPKMKYVVQQLKEVINISQEQATPRLSPLWWAELEILSSEAT 695          
BLAST of EY756682 vs. ExPASy Swiss-Prot
Match: Y1634_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.396e-12
Identity = 39/125 (31.20%), Postives = 68/125 (54.40%), Query Frame = 2
Query:   59 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDP------KQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEI 415
            +E+  +D+  N+Y+FG +L E+++GR  Y  + G L  WA E+L+  + +  +VDP LK F +  LE +  V   C++ DP        +PS++ +   L+   ++    A  + S L WAEL +
Sbjct:  539 MESRYLDVSGNIYAFGILLLEIVSGRPPYCKDKGFLIEWAKEFLEAPEAMSGLVDPELKHFNQEDLETVCEVASQCLNRDPTNNNNNHNKPSVQELCETLESRISLS-ISAELRSSSLAWAELAL 662          
The following BLAST results are available for this feature:
BLAST of EY756682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MRH1_ARATH2.818e-2950.43Probable LRR receptor-like serine/threonine-protei... [more]
Y5458_ARATH9.064e-2849.57Probable LRR receptor-like serine/threonine-protei... [more]
Y1634_ARATH2.396e-1231.20Probable LRR receptor-like serine/threonine-protei... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-E02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756682 ID=EY756682; Name=EY756682; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGGAACAATACAACTGCAGCAAAGACTGGATCAGCTGCTA
TGGAGCTTCTGGAAACCTCAGCAGTAGATCTAGAGAGCAATGTCTATAGC
TTTGGGACTATTTTGTTCGAGATGATAACCGGCAGGATCTCGTACTCCAT
AGAAAATGGCTCTCTGGAGAACTGGGCATCAGAATACTTGAAAGGGGAGC
AGCCGCTAAAAGATATAGTGGATCCTACTCTAAAATCTTTCCAGGAGAAT
GTGCTTGAGGAATTGCTTGTAGTGATCAAGAATTGCGTCCACCCTGATCC
TAAACAAAGACCATCAATGAGAGGCATTGCAGCTAAGTTGAAGGAAATCA
CAGCAATGGAACCTGATGGAGCAACACCCAAACTATCTCCTCTTTGGTGG
GCAGAGCTTGAAATATTGTCATCAGAAGCAAGTTGAGGTGAAGTTTTAGC
CTCATTGTAAATCTAAATGATATCTACTTTCTTTTTCCCTGTTTCTGTTT
ATGGGCTTGGAAGCAGTGGCATGTAGAGTTGATGCTGGTTGATGTAAGAA
AGTAGAGGAATGATTTTTTTTTTTTTTTTGGTGTAGATAACCANGAGAAA
AGGCCCTGCATCNTCTGCTTGATCTCTCNTTCTCTTTTTTGTTCCCGTTT
TTGCTTCTTTTTTTTTTTTTTTTGCCACTGCTAAAGTCGATTGGATTAAT
AACAGGATATAATGAATATGTTTGATCACCTCAATAAATGATGGTTTTCT
CTTTNNAAAAAAAAAAAAAAAAAAAAANAANNNAAAAAANNNNNNNNNNG
GGGGCGGCCGTCTAAAGGTCCCAAATTAAATACCGGGGGTGGGACGGCTT
ATCTTTTAAAGGGCCCCTAATTCTTTCCCGGGCCGCGGTTTACACGTCGT
GACGGGGAAACCCGGGGTTACCA
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