EY756680

Overview
NameEY756680
Unique NameEY756680
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11981 contig Csv1_Contig11981:607..1517. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756680 vs. ExPASy Swiss-Prot
Match: MORC4_HUMAN (MORC family CW-type zinc finger protein 4 OS=Homo sapiens GN=MORC4 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.136e-14
Identity = 76/265 (28.68%), Postives = 134/265 (50.57%), Query Frame = 2
Query:    8 SGAMRLGKDALVLTQTADSRSIAFLSQSLNQ--GKDNLEIPIVSYYRKGQFMELDTVVQSEATAKYNLKSIKEFSPFNKY--LIGEKAGLFQDKCTGTQIYIWNLDQWGSNYCLEWDNGLNGGSSFH----QGDILXXXXXXXXX-PGQISQKVP-LDYSLRSYLEVIFLVPRMKIYVQGSLVRSRPLAKSLNKTCVET--GTIMGKSAHLTLGRCQLEWEQMNCGIFLYWHGRLIEAYKRVGGMIH-NGDTGRGVIGVIDVSDL 763
            SG+MRLGKDALV T+   + ++  LSQ+  +      + +PIV + ++ + M    ++  ++    +L++I  +S FN+   L+ +   +   K  GT++ IWN+ +             NG S       Q DIL           G ++ ++P  +YSLR++  ++++ PRMKI+++   V ++ +AKSL     +T   T   K   +T G       Q   GI +Y + RLI+++++VG  +      G GVIGVI+ + L
Sbjct:  127 SGSMRLGKDALVFTKNGGTLTVGLLSQTYLECVQAQAVIVPIVPFNQQNKKM----IITEDSLP--SLEAILNYSIFNRENDLLAQFDAIPGKK--GTRVLIWNIRR-----------NKNGKSELDFDTDQYDILVSDFDTEEKMTGGVTSELPETEYSLRAFCGILYMKPRMKIFLRQKKVTTQMIAKSLANVEYDTYKPTFTNKQVRITFGFSCKNSNQF--GIMMYHNNRLIKSFEKVGCQVKPTRGEGVGVIGVIECNFL 370          
BLAST of EY756680 vs. ExPASy Swiss-Prot
Match: MORC4_MOUSE (MORC family CW-type zinc finger protein 4 OS=Mus musculus GN=Morc4 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.363e-14
Identity = 75/262 (28.63%), Postives = 134/262 (51.15%), Query Frame = 2
Query:    8 SGAMRLGKDALVLTQTADSRSIAFLSQSLNQ--GKDNLEIPIVSYYRKGQFMELDTVVQSEATAKYNLKSIKEFSPFN--KYLIGEKAGLFQDKCTGTQIYIWNLDQWGSNYC-LEWDNGLNGGSSFHQGDILXXXXXXXXXP-GQISQKVP-LDYSLRSYLEVIFLVPRMKIYVQGSLVRSRPLAKSLNKT--CVETGTIMGKSAHLTLGRCQLEWEQMNCGIFLYWHGRLIEAYKRVGGMIH-NGDTGRGVIGVIDVSDL 763
            SG+MRLGKDALV T+  ++ ++  LSQ+  +      + +PIV + ++ + M    +V  ++    +L++I  +S FN  K L+ +   +   K  GT++ IWN+ +       L++D          Q DIL           G ++ ++P  +YSLR++  ++++ PRMKI+++   V ++ +AKSL      +   T   K   +T G       Q   G+ +Y + RLI+A+++ G  +      G GVIGVI+ + L
Sbjct:  127 SGSMRLGKDALVFTKNGNTLAVGLLSQTYLECIQAQAVIVPIVPFSQQNKKM----IVTEDSLP--SLEAILNYSIFNCEKDLLSQFDAIPGKK--GTRVLIWNIRRNKDGKSELDFDTD--------QYDILVSDFDAEEKEIGGVTSELPETEYSLRAFCSILYMKPRMKIFLRQKKVTTQMIAKSLANVEYDIYKPTSTNKQVRITFGFSCKYHNQF--GVMMYHNNRLIKAFEKAGCQLKPTCGEGVGVIGVIECNFL 370          
The following BLAST results are available for this feature:
BLAST of EY756680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MORC4_HUMAN1.136e-1428.68MORC family CW-type zinc finger protein 4 OS=Homo ... [more]
MORC4_MOUSE7.363e-1428.63MORC family CW-type zinc finger protein 4 OS=Mus m... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-D11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756680 ID=EY756680; Name=EY756680; organism=Citrus sinensis; type=EST; length=911bp
CCACGCGTCCGGAGCAATGAGGCTTGGCAAGGATGCTCTTGTTCTTACAC
AGACTGCTGATTCCAGATCAATAGCTTTTCTTTCGCAATCTTTAAATCAA
GGGAAAGATAATCTTGAGATTCCCATTGTAAGCTACTACAGGAAAGGACA
GTTTATGGAACTTGATACAGTTGTCCAATCTGAAGCTACTGCAAAGTACA
ATTTGAAATCTATCAAAGAATTTTCACCATTTAACAAGTATTTGATTGGT
GAAAAAGCTGGTTTGTTCCAGGATAAATGCACTGGAACTCAGATATATAT
TTGGAATTTAGATCAGTGGGGTTCGAATTATTGTCTGGAGTGGGATAATG
GATTGAATGGTGGTAGCTCTTTTCACCAAGGTGACATACTCATCCGTTCT
AGGAGGATTAGATCTCGTCCTGGTCAGATTAGTCAAAAGGTGCCATTGGA
CTATTCACTTCGATCTTATCTAGAAGTCATCTTCTTAGTTCCACGAATGA
AGATATATGTTCAAGGTTCCTTGGTTAGAAGTCGACCATTGGCTAAGTCT
CTTAATAAGACTTGTGTAGAAACTGGTACTATCATGGGAAAATCTGCCCA
TTTAACTCTGGGTCGCTGTCAATTAGAGTGGGAGCAGATGAATTGTGGGA
TTTTCTTGTATTGGCATGGTCGTTTAATTGAGGCTTACAAGAGAGTTGGT
GGCATGATTCATAATGGAGATACGGGTCGAGGTGTGATTGGGGTCATAGA
TGTTAGTGATCTAATGGATGAAGGNAATGGTCNTTGTATGGTTCACAATA
ACAAGCAGGNNATCCTGGATTGTGAACATATGCTCGATTGGAGAATGGCT
ANGGAAGTANCTGATGATATTGGGACATAATTTGATCACTGAATGTGGGT
AAGATGTGCCC
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