EY728590

Overview
NameEY728590
Unique NameEY728590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9169 contig Csv1_Contig9169:59..833. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS21_ARATH (3-ketoacyl-CoA synthase 21 OS=Arabidopsis thaliana GN=KCS21 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.540e-56
Identity = 95/143 (66.43%), Postives = 121/143 (84.62%), Query Frame = 3
Query:   57 IRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDPNVWKDCIDRYPPKS-LANPFQERYSWLNDE 482
            +++ TS+ +  A  G GLNLK G++HFC+HPGGRA+I+G GK L L E+D+EPARMALHRFGNTS+GGLWYVLGYMEAK RLKKG++ILM+S+GAGF+ NNCVWEV+KDL+D NVW+D +DRYP  S + NPF E+Y W+ND+
Sbjct:  314 LKRRTSAKREPASSGIGLNLKTGLQHFCIHPGGRAIIEGVGKSLGLTEFDIEPARMALHRFGNTSSGGLWYVLGYMEAKNRLKKGEKILMMSMGAGFESNNCVWEVLKDLDDKNVWEDSVDRYPELSRIPNPFVEKYDWINDD 456          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS12_ARATH (3-ketoacyl-CoA synthase 12 OS=Arabidopsis thaliana GN=KCS12 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.047e-52
Identity = 92/144 (63.89%), Postives = 111/144 (77.08%), Query Frame = 3
Query:   63 KSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDL----EDPNVWKDCIDRYPPKSLANPFQERYSWLNDE 482
            K +++  P   L AG+N K GIEHFC+H GG+AVIDG G  L+L+EYD+EPARM LHRFGNTSA  LWYVL YMEAKKRLK+GDR+ MIS GAGFKCN+CVWEV++DL       NVW  CID YPPKS+ NP+ E++ W+ DE
Sbjct:  321 KGSTNLPPGTPLKAGINFKTGIEHFCIHTGGKAVIDGIGHSLDLNEYDIEPARMTLHRFGNTSASSLWYVLAYMEAKKRLKRGDRVFMISFGAGFKCNSCVWEVVRDLTGGESKGNVWNHCIDDYPPKSILNPYLEKFGWIQDE 464          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS3_ARATH (3-ketoacyl-CoA synthase 3 OS=Arabidopsis thaliana GN=KCS3 PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 3.978e-52
Identity = 91/143 (63.64%), Postives = 113/143 (79.02%), Query Frame = 3
Query:   66 STSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLE----DPNVWKDCIDRYPPKSLANPFQERYSWLNDE 482
            + +   P+A + AG+N K GI+HFC+H GG+AVID  G  L+L+EYDLEPARM LHRFGNTSA  LWYVLGYMEAKKRLK+GDR+ MIS GAGFKCN+CVWEV++DL       NVW  CI++YPPKS+ NPF E+Y W+++E
Sbjct:  366 NVTQAAPKAGVKAGINFKTGIDHFCIHTGGKAVIDAIGYSLDLNEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKRGDRVFMISFGAGFKCNSCVWEVVRDLNVGEAVGNVWNHCINQYPPKSILNPFFEKYGWIHEE 508          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS20_ARATH (Probable 3-ketoacyl-CoA synthase 20 OS=Arabidopsis thaliana GN=KCS20 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.269e-31
Identity = 66/139 (47.48%), Postives = 89/139 (64.03%), Query Frame = 3
Query:   24 RYVIQSYYENRIR--KSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLE--DPNVWKDCIDRYP 428
            +YVIQ     +++  +S SS  P        N K   EHFC+H GGRAVI      L+L + D+EP++M LHRFGNTS+  +WY L Y+EAK+R+KKGDR+L I+ G+GFKCN+ VW  ++ +E    N W D ID YP
Sbjct:  322 QYVIQHILCKKLKIYESNSSYTP--------NFKTAFEHFCIHTGGRAVIQAMEMNLKLTKVDIEPSKMTLHRFGNTSSSSIWYALSYLEAKRRMKKGDRVLQIAFGSGFKCNSAVWRCIRKVEPNTENKWLDFIDSYP 452          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS8_ARATH (3-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana GN=KCS8 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.774e-29
Identity = 57/108 (52.78%), Postives = 77/108 (71.30%), Query Frame = 3
Query:  111 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDP--NVWKDCIDRYP 428
            + K   EHFC+H GGRA+ID   K L+L    +E +RM LHRFGNTS+  +WY L Y EAK R+K+GDRI  I+LG+GFKCN+ VW  ++D++    + W+DC+DRYP
Sbjct:  369 DFKLAFEHFCIHAGGRALIDELEKNLKLSPLHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMKEGDRIWQIALGSGFKCNSSVWVALRDVKPSANSPWEDCMDRYP 476          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS4_ARATH (3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.623e-29
Identity = 54/108 (50.00%), Postives = 77/108 (71.30%), Query Frame = 3
Query:  111 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDPN--VWKDCIDRYP 428
            + K   EHFC+H GGRAVID   K L+L    +E +RM LHRFGNTS+  +WY L Y+EAK R+++G+R+  I+ G+GFKCN+ +WE ++ ++  N   W+DCID+YP
Sbjct:  404 DFKLAFEHFCIHAGGRAVIDELEKNLQLSPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRRGNRVWQIAFGSGFKCNSAIWEALRHVKPSNNSPWEDCIDKYP 511          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS6_ARATH (3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.731e-29
Identity = 56/108 (51.85%), Postives = 75/108 (69.44%), Query Frame = 3
Query:  111 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDP--NVWKDCIDRYP 428
            + K   EHFC+H GGRAVID   K L+L    +E +RM LHRFGNTS+  LWY L Y+E+K R+++GDR+  I+ G+GFKCN+ VW+  + ++ P    W DCIDRYP
Sbjct:  381 DFKLAFEHFCIHAGGRAVIDELQKNLQLSGEHVEASRMTLHRFGNTSSSSLWYELSYIESKGRMRRGDRVWQIAFGSGFKCNSAVWKCNRTIKTPKDGPWSDCIDRYP 488          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS9_ARATH (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 57/111 (51.35%), Postives = 79/111 (71.17%), Query Frame = 3
Query:  111 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDPNV---WKDCIDRYPPK 434
            + K   +HFC+H GGRAVID   K L+L +  +E +RM LHRFGNTS+  +WY L Y+EAK R+KKG+R+  I+ G+GFKCN+ VW  + +++ P+V   W+ CIDRYP K
Sbjct:  400 DFKLAFDHFCIHAGGRAVIDELEKNLQLSQTHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMKKGNRVWQIAFGSGFKCNSAVWVALNNVK-PSVSSPWEHCIDRYPVK 509          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS14_ARATH (Probable 3-ketoacyl-CoA synthase 14 OS=Arabidopsis thaliana GN=KCS14 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 55/111 (49.55%), Postives = 76/111 (68.47%), Query Frame = 3
Query:  111 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLED-----PNVWKDCIDRYP 428
            + K   +HFC+H GGRA++D   KGL L E+DLEP+RM LHRFGNTS+  LWY L Y+EAK R+K+GDR+  ++ G+GFKCN+ VW  ++ +        N W D + +YP
Sbjct:  345 DFKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKCNSIVWRALRTIPANESLVGNPWGDSVHKYP 455          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS13_ARATH (3-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana GN=HIC PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 55/111 (49.55%), Postives = 76/111 (68.47%), Query Frame = 3
Query:  111 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLED-----PNVWKDCIDRYP 428
            + K   +HFC+H GGRA++D   KGL L E+DLEP+RM LHRFGNTS+  LWY L Y+EAK R+K+GDR+  ++ G+GFKCN+ VW  ++ +        N W D + +YP
Sbjct:  352 DFKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKCNSIVWRALRTIPANESLVGNPWGDSVHKYP 462          
The following BLAST results are available for this feature:
BLAST of EY728590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS21_ARATH4.540e-5666.433-ketoacyl-CoA synthase 21 OS=Arabidopsis thaliana... [more]
KCS12_ARATH1.047e-5263.893-ketoacyl-CoA synthase 12 OS=Arabidopsis thaliana... [more]
KCS3_ARATH3.978e-5263.643-ketoacyl-CoA synthase 3 OS=Arabidopsis thaliana ... [more]
KCS20_ARATH2.269e-3147.48Probable 3-ketoacyl-CoA synthase 20 OS=Arabidopsis... [more]
KCS8_ARATH2.774e-2952.783-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana ... [more]
KCS4_ARATH3.623e-2950.003-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana ... [more]
KCS6_ARATH4.731e-2951.853-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana ... [more]
KCS9_ARATH1.377e-2851.353-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana ... [more]
KCS14_ARATH1.377e-2849.55Probable 3-ketoacyl-CoA synthase 14 OS=Arabidopsis... [more]
KCS13_ARATH1.377e-2849.553-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-H07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728590 ID=EY728590; Name=EY728590; organism=Citrus sinensis; type=EST; length=774bp
CACGCGTCCGCGGACGCGTGGGTCGGTATGTAATCCAATCCTATTATGAA
AACAGAATCAGAAAAAGCACTTCTAGTACTAAACCTGAAGCAGTACTCGG
AGCAGGGTTGAACCTGAAAGCTGGAATTGAGCATTTCTGCTTACATCCTG
GAGGAAGAGCTGTGATTGATGGGACTGGAAAGGGCTTGGAATTGGATGAA
TACGATCTTGAGCCAGCAAGAATGGCGCTTCATCGATTCGGAAACACATC
AGCCGGTGGCCTGTGGTATGTTTTAGGCTACATGGAAGCTAAAAAGAGAC
TTAAAAAAGGTGACAGAATCCTGATGATTAGCCTTGGAGCTGGTTTTAAA
TGCAACAACTGTGTCTGGGAAGTTATGAAAGACCTGGAGGATCCTAATGT
TTGGAAAGATTGCATTGACCGGTACCCTCCGAAATCGCTTGCAAATCCTT
TCCAGGAGAGGTATAGCTGGCTCAATGATGAGTATTTGAGCTTCGTTAGG
CTTTAATTCAAAAAAAAAAAAAAAAGGTTAAAAGTTTTTTAAAGAAGCTT
CAAGTTCTGTATCTGCTTCTTCTGTTCTGTTTTGATGTTAAGTTTAAGTA
AGAGATGCTGCAAATGTATTTTATCGAATCGTACGTACTCTGATTCCTGC
ATTTACTGCTACAATAAAGTTGTAGTACCTCAATGGTAAGTTATTAATGC
ATGGGAGATCTCATGTATTTGTAACTATTATTAGATTTATCCATGAATTA
TATATTGATTTTGAATTATAANNN
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