EY756661

Overview
NameEY756661
Unique NameEY756661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12928 contig Csv1_Contig12928:1384..2229. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY756661 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18
Identity = 67/163 (41.10%), Postives = 87/163 (53.37%), Query Frame = 2 
Query:   74 ATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLC----TTPGIDIHEIRNYTNQPC-NYSMGHPYNFNTPSITV-AHLVKTQVVTRTVTNVAEEETYSMSARMQ-PAIAIEVNPPAMTLKPGASRK-FTVTLTVRS--VTGTYSFGEICMKGSRGHKVNIPV 532
            +TPFD+G+GHV+P  A +PGLI+D   EDYLGFLC    T+P I     RNYT  P  +YS+    + N PS  V    V     TRTVT+V    TYS+    +   + I V P  +  K    +K +TVT TV S   +G+ SFG I     + H V  PV
Sbjct:  594 STPFDHGAGHVSPTTATNPGLIYDLTTEDYLGFLCALNYTSPQIRSVSRRNYTCDPSKSYSVA---DLNYPSFAVNVDGVGAYKYTRTVTSVGGAGTYSVKVTSETTGVKISVEPAVLNFKEANEKKSYTVTFTVDSSKPSGSNSFGSIEWSDGK-HVVGSPV 752
The following BLAST results are available for this feature:
BLAST of EY756661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SUBL_ARATH9.686e-1841.10Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-B12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756661 ID=EY756661; Name=EY756661; organism=Citrus sinensis; type=EST; length=846bp
CCACGCGTCCGGAGCAAGTAGGCCTCTTCAAGCACAACAATATTCTGAAA
CAGAAGCCATGAAGCTGGTTACAGCTACACCATTTGACTATGGGAGTGGC
CATGTCAATCCAAGAGCTGCCTTGGATCCTGGACTCATATTTGATGCAGG
TTACGAGGATTACTTGGGATTCTTGTGCACAACTCCCGGCATAGACATTC
ACGAGATAAGAAACTACACAAACCAACCCTGCAACTACTCAATGGGCCAC
CCGTATAATTTCAATACTCCGTCAATCACAGTCGCCCATCTTGTGAAGAC
TCAAGTAGTTACACGAACAGTCACAAATGTTGCCGAAGAAGAAACCTACT
CGATGTCCGCCAGGATGCAACCAGCCATTGCCATTGAAGTCAACCCTCCA
GCCATGACTCTGAAACCTGGTGCTTCACGGAAGTTCACTGTGACCCTCAC
TGTGAGATCGGTGACCGGCACGTACAGTTTTGGGGAAATTTGCATGAAAG
GAAGTCGAGGGCACAAGGTAAATATCCCGGTGATAGCTCAGGGAAATTGG
CGATGAATTGACTGATGAGATGCGTTGGGGTCAATGTTAGTTAAGTTGTA
TCGTTGTAATATTCTTTTGTAATCTGTGGTAATAAGATAGCTATAAGGCC
AAATATATATTGTCTCAAATATATATGTGGAGTAGTTGTAAAGATAACAA
GTACAAGGGGGAGACGCCTAGTTTCTTCCATTCATAAGTTTTGCTTATTA
GTCTAGTAATTTGAGATAAATTGCTTCTTAATTCCCCTTTTATGATTTAT
GAGAAAAGGGTTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCC
back to top