EY756640

Overview
NameEY756640
Unique NameEY756640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756640_ssr216 microsatellite EY756640_ssr216:216..227. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13343 contig Csv1_Contig13343:1..889. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 2.033e-55
Identity = 107/167 (64.07%), Postives = 124/167 (74.25%), Query Frame = 1
Query:  262 MARGFEXXXXXXXXXXXXXXCKGSTIGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTD-NSSSLVVPAMQNVFTALKKAGLHKRIKVSSTIPLGFCLDRS 759
            MAR F+              C G  +GVCYGR+ADDLPTP KV QL++QHNIKY+RIYD N QVLKAF NT +ELMIG+PNSDL  F+Q QSN D+WLKNS+LPYYP  KITYITVGAE T+    N+SS VVPAMQNV TAL+K GL +RIKVS+T+ LG  L RS
Sbjct:    1 MARDFKLIFSISILLLLLDCCYGGKVGVCYGRSADDLPTPSKVVQLIQQHNIKYVRIYDYNSQVLKAFGNTSIELMIGVPNSDLNAFSQSQSNVDTWLKNSVLPYYPTTKITYITVGAESTDDPHINASSFVVPAMQNVLTALRKVGLSRRIKVSTTLSLGI-LSRS 166          

HSP 2 Score: 27.7202 bits (60), Expect = 2.033e-55
Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 2
Query:  758 PASAGAFYSXHAHFLKPL 811
            P SAGAF S +A+FL+P+
Sbjct:  168 PPSAGAFNSSYAYFLRPM 185          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.598e-50
Identity = 94/143 (65.73%), Postives = 123/143 (86.01%), Query Frame = 1
Query:  331 STIGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTDNSSSLVVPAMQNVFTALKKAGLHKRIKVSSTIPLGFCLDRS 759
            S IG+CYGRNAD+LP+P++V++L++  NIK++RIYD+NI VLKAFANTG+ELMIG+PN+DLL FAQFQSN D+WL N+ILPYYP+ KIT I+VG EVTE+ DN++ LV+PAM+N+ TALKK+GL K+IK+SS+  L   L RS
Sbjct:   25 SKIGICYGRNADNLPSPNRVSELIQHLNIKFVRIYDANIDVLKAFANTGIELMIGVPNADLLAFAQFQSNVDTWLSNNILPYYPSTKITSISVGLEVTEAPDNATGLVLPAMRNIHTALKKSGLDKKIKISSSHSLAI-LSRS 166          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: E13B_PEA (Glucan endo-1,3-beta-glucosidase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.124e-26
Identity = 59/136 (43.38%), Postives = 90/136 (66.18%), Query Frame = 1
Query:  337 IGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTDNS--SSLVVPAMQNVFTALKKAGLHKRIKVSSTIPL 738
            IG+CYG   ++LP  ++V  L K +NIK +R+YD N   L A  ++G+EL++GIPNSDL   A  Q +A  W++ ++L +YP+ KI YI VG EV+    +S  +  V+PA QNV+ A++  GLH +IKV++ I +
Sbjct:   34 IGICYGMMGNNLPPANEVIALYKANNIKRMRLYDPNQPALNALRDSGIELILGIPNSDLQTLATNQDSARQWVQRNVLNFYPSVKIKYIAVGNEVSPVGGSSWLAQYVLPATQNVYQAIRAQGLHDQIKVTTAIDM 169          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: E13B_PHAVU (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.072e-26
Identity = 57/136 (41.91%), Postives = 91/136 (66.91%), Query Frame = 1
Query:  337 IGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTDNS--SSLVVPAMQNVFTALKKAGLHKRIKVSSTIPL 738
            IGVCYG   ++LP+ ++V  L + +NI+ +R+YD N   L+A  N+G+EL++G+PNSDL   A     A  W++ ++L ++P+ KI YI VG EV+    +S  +  V+PA+QNV+ A++  GLH +IKVS+ I +
Sbjct:    2 IGVCYGMMGNNLPSANEVINLYRSNNIRRMRLYDPNQAALQALRNSGIELILGVPNSDLQGLATNADTARQWVQRNVLNFWPSVKIKYIAVGNEVSPVGGSSWYAQYVLPAVQNVYQAVRAQGLHDQIKVSTAIDM 137          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 1.377e-25
Identity = 57/137 (41.61%), Postives = 88/137 (64.23%), Query Frame = 1
Query:  334 TIGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTDNSS--SLVVPAMQNVFTALKKAGLHKRIKVSSTIPL 738
            ++GVCYG   ++LP   +V QL K  NI+ +R+YD N   L+A   + +E+M+G+PNSDL   A   SNA++W++ ++  ++PA K  YI VG EV+  T  SS    ++PAM+N+  A+  AGL   IKVSS++ +
Sbjct:   32 SVGVCYGMLGNNLPPASQVVQLYKSKNIRRMRLYDPNQAALQALRGSNIEVMLGVPNSDLQNIAANPSNANNWVQRNVRNFWPAVKFRYIAVGNEVSPVTGTSSLTRYLLPAMRNIRNAISSAGLQNNIKVSSSVDM 168          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.348e-25
Identity = 58/143 (40.56%), Postives = 92/143 (64.34%), Query Frame = 1
Query:  325 KGSTIGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTDNSSSLVVPAMQNVFTALKKAGLHKRIKVSSTIPLGFCLD 753
            +GS IGV  G +  D+P P +V  L+K   I+++R+Y+++  +L A ANTG++++I IPN  LL   Q  S A +W+K +++ +YPA  IT ++VG+EV  S  N++ ++V A++NV  AL  A L K IKVS+ +     LD
Sbjct:   28 EGSYIGVNIGTDLSDMPHPTQVVALLKAQEIRHIRLYNADPGLLIALANTGIKVIISIPNDQLLGIGQSNSTAANWVKRNVIAHYPATMITAVSVGSEVLTSLSNAAPVLVSAIKNVHAALLSANLDKLIKVSTPLSTSLILD 170          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: E13H_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.166e-24
Identity = 61/146 (41.78%), Postives = 90/146 (61.64%), Query Frame = 1
Query:  328 GSTIGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTDNSS--SLVVPAMQNVFTALKKAGLHKRIKVSSTIPLGFCLDRS 759
            G+  GVCYGR  + LP+P  V  L  ++NI+ +RIYD +   L+A   + +ELM+G+PN DL   A  Q+NAD+W++N++   Y   K  YI VG EV+   +NS    +++ AM+N+ TA+  AGL  +IKVS+ I  G   D S
Sbjct:   23 GAQAGVCYGRQGNGLPSPADVVSLCNRNNIRRMRIYDPDQPTLEALRGSNIELMLGVPNPDLENVAASQANADTWVQNNV-RNYGNVKFRYIAVGNEVSPLNENSKYVPVLLNAMRNIQTAISGAGLGNQIKVSTAIETGLTTDTS 167          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.749e-23
Identity = 54/132 (40.91%), Postives = 86/132 (65.15%), Query Frame = 1
Query:  331 STIGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTDNSSSLVVPAMQNVFTALKKAGLHKRIKVSS 726
            S IGV  G    ++P+P +V  L+K  NI  +R+YD++  +L AFA+TGV+++I +PN  LL  +Q  + A +W+  ++  YYPA  IT I VG+EV  S  N++S++V A++ +  AL  A L ++IKVS+
Sbjct:   21 SLIGVNIGTEVTNMPSPTQVVALLKSQNINRVRLYDADRSMLLAFAHTGVQVIISVPNDQLLGISQSNATAANWVTRNVAAYYPATNITTIAVGSEVLTSLTNAASVLVSALKYIQAALVTANLDRQIKVST 152          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: E13B_PRUPE (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica GN=GNS1 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.425e-22
Identity = 58/138 (42.03%), Postives = 86/138 (62.32%), Query Frame = 1
Query:  328 GSTIGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTDNSSSLVVPAMQNVFTALKKAGLHKRIKVSSTIPLG 741
            G+ IGVC G   DDLP   +V  L K +NI  +R+YD N   L+A   + ++L++G+PN +L   A  Q+NA++W++N++   Y   K  YI VG EV  S D+ +  +VPAM+N+  A+  AGL K+IKVS+ I  G
Sbjct:   37 GAPIGVCNGMVGDDLPPQAEVVALYKTNNIPRMRLYDPNPAALEALRGSNIKLLLGVPNENLQYIALSQANANAWVQNNV-RNYANVKFKYIAVGNEVKPS-DSFAQFLVPAMRNIQEAISLAGLAKKIKVSTAIDTG 172          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: E13F_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.430e-22
Identity = 54/137 (39.42%), Postives = 85/137 (62.04%), Query Frame = 1
Query:  334 TIGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTDNS--SSLVVPAMQNVFTALKKAGLHKRIKVSSTIPL 738
            +IGVCYG   ++LP   +V QL K  NI  LR+YD N   L+A   + +E+M+G+PNSD+   A    +A  W++ ++  ++P  KI YI VG E++  T  S  +S + PAM N++ A+ +AGL   IKVS+++ +
Sbjct:   34 SIGVCYGMLGNNLPNHWEVIQLYKSRNIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDM 170          
The following BLAST results are available for this feature:
BLAST of EY756640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
E1313_ARATH2.033e-5564.07Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E1312_ARATH3.598e-5065.73Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E13B_PEA2.124e-2643.38Glucan endo-1,3-beta-glucosidase OS=Pisum sativum ... [more]
E13B_PHAVU8.072e-2641.91Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]
GUB_NICPL1.377e-2541.61Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2... [more]
E132_ARATH2.348e-2540.56Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E13H_TOBAC1.166e-2441.78Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E133_ARATH3.749e-2340.91Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E13B_PRUPE1.425e-2242.03Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]
E13F_TOBAC2.430e-2239.42Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-H11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756640 ID=EY756640; Name=EY756640; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGCTATTGGGCAAGCTCTCTCACTCTATCCCGAGCCCCTCG
AAACAATTTAATTTAAAAAGGTGTCGAAAGAGAGACGTTACTGTCTGTGT
GAGCAGAGCAGAGTGTAACGTTACAAATTAAGCTTAACGGAGTTCAATAA
AAACAAGAGTAAAGTTTAAGACAACGCACACAACAGCAGTCACCGTACAG
TAAGTGGGCTTACTTGAGAGAGAGAGAGTGGGAGGGGAGAGAAAGTTCAG
TTTTTTTAGCAATGGCGAGAGGATTCGAGCTCTTTTTTGCCATTTCACTG
TTGCTTGCGCTTCTGGGTTTGTGCAAAGGAAGTACTATTGGTGTCTGCTA
TGGAAGAAATGCTGATGACCTCCCAACGCCGGATAAAGTTGCACAGTTGG
TTAAACAACATAACATCAAATATCTGAGGATCTATGATTCTAACATCCAG
GTCCTCAAGGCATTTGCAAATACTGGAGTTGAACTCATGATCGGAATTCC
AAATTCAGATTTGTTGCCATTTGCACAGTTCCAATCCAATGCAGATAGCT
GGCTGAAAAACAGCATCCTTCCTTACTACCCAGCTGCAAAAATCACATAT
ATAACTGTTGGTGCTGAAGTCACCGAAAGCACCGATAATTCCTCTTCACT
AGTTGTACCCGCAATGCAAAATGTCTTTACGGCATTAAAGAAAGCTGGCC
TGCATAAAAGGATTAAGGTCTCTAGTACCATTCCCTTGGGGTTCTGTCTC
GATCGTTCCCGCATCTGCAGGGGCCTTTTATAGCANGCATGCACATTTTC
TGAAACCCTTGNTNGGAGTCTTGCTGANTACAGTCACCTTTATGATAGTA
TATATCCGTCTATGCATATGAGATCTCCCACATGTGTCT
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