EY756632

Overview
NameEY756632
Unique NameEY756632
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6107 contig Csv1_Contig6107:478..1167. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756632 vs. ExPASy Swiss-Prot
Match: RSPH1_HUMAN (Radial spoke head 1 homolog OS=Homo sapiens GN=RSPH1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 37/92 (40.22%), Postives = 48/92 (52.17%), Query Frame = 3
Query:   33 GS*YRG*YRQDLRHGFGVYKFYTTDVYAGEWSNGQSHGCGVHTCEDVSRYVGEFKWGVKHGLGHCHLRNGDTYAREYFADKMHGFSVYSFAK 308
            G  Y G Y    RHG G+YKF     Y GE+   + HG G     D SRY GE+   ++HG G  +  N DTY  E+FA + HG   Y +A+
Sbjct:   41 GDTYEGSYEFGKRHGQGIYKFKNGARYIGEYVRNKKHGQGTFIYPDGSRYEGEWANDLRHGHGVYYYINNDTYTGEWFAHQRHGQGTYLYAE 132          
BLAST of EY756632 vs. ExPASy Swiss-Prot
Match: PI5K9_ARATH (Phosphatidylinositol-4-phosphate 5-kinase 9 OS=Arabidopsis thaliana GN=PIP5K9 PE=1 SV=2)

HSP 1 Score: 63.1586 bits (152), Expect = 5.586e-12
Identity = 32/99 (32.32%), Postives = 50/99 (50.51%), Query Frame = 3
Query:    9 PGDETWARGS*YRG*YRQDLRHGFGVYKFYTTDVYAGEWSNGQSHGCGVHTCEDVSRYVGEFKWGVKHGLGHCHLRNGDTYAREYFADKMHGFSVYSFA 305
            PG   W+ G  Y G +R+ +RHG G  ++ +   Y GE+S G  HG G +   +   Y G ++  +KHGLG+    NGD +   +      G   Y++A
Sbjct:   70 PGKYIWSDGCVYDGEWRRGMRHGIGNMRWASGASYDGEFSGGYMHGSGTYVDANKLTYKGRWRLNLKHGLGYQVYPNGDVFEGSWIQGLGEGPGKYTWA 168          

HSP 2 Score: 28.1054 bits (61), Expect = 5.586e-12
Identity = 11/29 (37.93%), Postives = 17/29 (58.62%), Query Frame = 1
Query:  310 GHWYGGVWHEGIRQGLGMYTFKNGKTNLG 396
            G  Y G W  G+  G+G+YT+ +G   +G
Sbjct:  193 GDSYEGSWLNGMMHGVGVYTWSDGGCYVG 221          
The following BLAST results are available for this feature:
BLAST of EY756632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
RSPH1_HUMAN4.329e-1240.22Radial spoke head 1 homolog OS=Homo sapiens GN=RSP... [more]
PI5K9_ARATH5.586e-1232.32Phosphatidylinositol-4-phosphate 5-kinase 9 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-H03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756632 ID=EY756632; Name=EY756632; organism=Citrus sinensis; type=EST; length=690bp
CCACGCGTCCGGGAGACGAGACTTGGGCCAGAGGGAGCTGATATAGGGGC
TAATATAGGCAAGATCTTAGGCATGGATTTGGGGTTTATAAGTTTTATAC
CACAGATGTTTATGCAGGCGAGTGGTCTAATGGGCAAAGTCATGGATGTG
GAGTTCATACTTGTGAGGATGTGAGTCGATATGTTGGCGAATTTAAGTGG
GGGGTCAAGCACGGCCTTGGCCATTGCCATTTAAGAAATGGGGACACATA
TGCTAGAGAATATTTTGCGGACAAGATGCATGGATTCAGCGTCTATTCTT
TTGCCAAATGGGCATTGGTATGGAGGAGTCTGGCATGAGGGTATAAGACA
AGGGCTTGGAATGTACACATTCAAAAATGGGAAAACCAATCTGGGCAAAA
TGGAATTATTGACATTCCAAGTACACAGAATACGACTCATCCTGTATCAC
CTATTGCAGTTTACCACTCCAAAGTACTCAATGCAGTGCATGTATTTAAA
CCTTTTTAACCAAACTTTTATTCAATTACCACTCTACAGCTGCTAATGCC
TAAAATTTATTACAACTTTATTGTCTCACTGTAGATGTTTTAATGTTCCT
TTTGTATATACTTAACAAGTCTTTACTTTCAGCATTTTATTGATGTTAGA
AAGATTAATGAAATTTAAGATAACAGTCNGAAGGTAAAAA
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