EY756621

Overview
NameEY756621
Unique NameEY756621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9822 contig Csv1_Contig9822:280..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ORYSJ (Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. japonica GN=GDCSH PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.085e-36
Identity = 71/92 (77.17%), Postives = 82/92 (89.13%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENA 282
            V FVELPE GA V QGG FG VESVKATSD+NSPISGEV+EVN KL+ETPGL+NSSPYE+GW+IKVKPSSPS+L++L+DP  YTK CEEE+A
Sbjct:   72 VVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSETPGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEEDA 163          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ORYSI (Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. indica GN=GDCSH PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.085e-36
Identity = 71/92 (77.17%), Postives = 82/92 (89.13%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENA 282
            V FVELPE GA V QGG FG VESVKATSD+NSPISGEV+EVN KL+ETPGL+NSSPYE+GW+IKVKPSSPS+L++L+DP  YTK CEEE+A
Sbjct:   72 VVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSETPGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEEDA 163          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_FLAAN (Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala GN=GDCSH PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.851e-36
Identity = 70/94 (74.47%), Postives = 84/94 (89.36%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 288
            V FV+LPE G SV +  GFG VESVKATSDVNSPISGE++EVN+KL+ETPGL+NSSPYE+GW+IKVKPS+PS+L+SLM  + YTKFCEEE+AAH
Sbjct:   69 VVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDAAH 162          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_FLATR (Glycine cleavage system H protein, mitochondrial OS=Flaveria trinervia GN=GDCSH PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 3.157e-36
Identity = 70/93 (75.27%), Postives = 82/93 (88.17%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAA 285
            V FVELPE G SV +  GFG VESVKATSDVNSPISGE++EVN+KLT+TPGL+N SPYE+GW+IKVKPS+PS+L+SLM P+ YTKFCEEE AA
Sbjct:   71 VVFVELPEVGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLTKTPGLINKSPYEDGWMIKVKPSNPSELDSLMGPKEYTKFCEEEGAA 163          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_FLAPR (Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei GN=GDCSH PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 4.124e-36
Identity = 69/94 (73.40%), Postives = 84/94 (89.36%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 288
            V FV+LPE G SV +  GFG VESVKATSDVNSPISGE++EVN+KL+ETPGL+NSSPYE+GW+IKVKPS+PS+L+SLM  + YTKFCEEE++AH
Sbjct:   69 VVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDSAH 162          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_PEA (Glycine cleavage system H protein, mitochondrial OS=Pisum sativum GN=GDCSH PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.200e-35
Identity = 71/94 (75.53%), Postives = 81/94 (86.17%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 288
            V FVELPE G SV +G GFG VESVKATSDVNSPISGEVIEVNT LT  PGL+NSSPYE+GW+IK+KP+SP +LESL+  + YTKFCEEE+AAH
Sbjct:   72 VVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGKPGLINSSPYEDGWMIKIKPTSPDELESLLGAKEYTKFCEEEDAAH 165          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH2_ARATH (Probable glycine cleavage system H protein 2, mitochondrial OS=Arabidopsis thaliana GN=At1g32470 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 2.047e-35
Identity = 70/94 (74.47%), Postives = 83/94 (88.30%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 288
            V FVELPE  +SV +   FG VESVKATS++ SPISGEVIEVNTKLTE+PGL+NSSPYE+GW+IKVKPSSP++LE+LM P+ YTKFCEEE+AAH
Sbjct:   73 VVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH1_ARATH (Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana GN=GDCSH PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.016e-34
Identity = 69/94 (73.40%), Postives = 81/94 (86.17%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 288
            V FVELPE   SV +   FG VESVKATS++ SPISGE+IEVN KLTE+PGL+NSSPYE+GW+IKVKPSSP++LESLM P+ YTKFCEEE+AAH
Sbjct:   72 VVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTESPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_MESCR (Glycine cleavage system H protein, mitochondrial OS=Mesembryanthemum crystallinum GN=GDCSH PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.051e-31
Identity = 66/92 (71.74%), Postives = 79/92 (85.87%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENA 282
            V F ELPE GA V  G  F  VESVKATSDVNSPISGE++EVNTKL+++PGL+NSSPYEEGW++KVKPS+P++LESLM  + YTKFCEEE+A
Sbjct:   72 VVFAELPEGGA-VSAGKPFASVESVKATSDVNSPISGEIVEVNTKLSDSPGLLNSSPYEEGWMVKVKPSNPAELESLMGSKEYTKFCEEEDA 162          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_FLAPU (Glycine cleavage system H protein, mitochondrial (Fragment) OS=Flaveria pubescens GN=GDCSH PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.982e-30
Identity = 61/84 (72.62%), Postives = 74/84 (88.10%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYT 258
            V FV+LPE G SV +  GFG VESVKATSDVNSPISGE++EVN+KL+ETPGL+NSSPYE+GW+IKVKPS+PS+L+SLM  + YT
Sbjct:   69 VVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYT 152          
The following BLAST results are available for this feature:
BLAST of EY756621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
GCSH_ORYSJ1.085e-3677.17Glycine cleavage system H protein, mitochondrial O... [more]
GCSH_ORYSI1.085e-3677.17Glycine cleavage system H protein, mitochondrial O... [more]
GCSH_FLAAN1.851e-3674.47Glycine cleavage system H protein, mitochondrial O... [more]
GCSH_FLATR3.157e-3675.27Glycine cleavage system H protein, mitochondrial O... [more]
GCSH_FLAPR4.124e-3673.40Glycine cleavage system H protein, mitochondrial O... [more]
GCSH_PEA1.200e-3575.53Glycine cleavage system H protein, mitochondrial O... [more]
GCSH2_ARATH2.047e-3574.47Probable glycine cleavage system H protein 2, mito... [more]
GCSH1_ARATH1.016e-3473.40Glycine cleavage system H protein 1, mitochondrial... [more]
GCSH_MESCR1.051e-3171.74Glycine cleavage system H protein, mitochondrial O... [more]
GCSH_FLAPU1.982e-3072.62Glycine cleavage system H protein, mitochondrial (... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-G03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756621 ID=EY756621; Name=EY756621; organism=Citrus sinensis; type=EST; length=428bp
CCACGCGTCCGGTTTGTGGAGCTGCCAGAAACTGGTGCCTCAGTCAAACA
AGGCGGCGGCTTCGGGGTTGTAGAAAGTGTGAAAGCAACCAGTGACGTTA
ATTCCCCCATTTCTGGTGAAGTTATTGAGGTTAACACCAAGCTCACTGAA
ACGCCTGGCTTGGTCAATTCAAGCCCATATGAAGAAGGATGGCTGATAAA
GGTGAAGCCTAGCAGCCCTTCGGATTTAGAATCCTTGATGGATCCACAGG
CTTACACGAAATTTTGCGAAGAAGAAAATGCAGCTCATTAGAATCTTCAC
ATTGTTTCATTTTCTTTTCCCAAAACATACTAATAAATCTCTTTGTTTTA
CTCGCTATGTGTGTTGTAATTCTGCATCTTCATGTAATTAAGACCCATTT
CTCCAAAAAAAAAAAAAAAAAAAAAAAA
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