CX286803

Overview
NameCX286803
Unique NameCX286803
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length523
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT3_ARATH (Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 2.506e-73
Identity = 131/174 (75.29%), Postives = 145/174 (83.33%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXXDADEVFCTGT 523
            NKRW+PP GKGSLY+RPLLMG+GAVLGLAPAPEYTF+IYVSPVGNYFKEG+APINL+VE+E HRATPGGTGGVKTIGNY             GYSDVLYLDC++KRYLEEVSSCNIF+VK NVISTP IKGTILPGITRKS+IDVA++QGFQ            +ADEVFCTGT
Sbjct:  186 NKRWVPPPGKGSLYVRPLLMGTGAVLGLAPAPEYTFIIYVSPVGNYFKEGVAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCIYKRYLEEVSSCNIFIVKDNVISTPEIKGTILPGITRKSMIDVARTQGFQVEERNVTVDELLEADEVFCTGT 359          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT5_ARATH (Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 3.272e-73
Identity = 134/174 (77.01%), Postives = 144/174 (82.76%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXXDADEVFCTGT 523
            NKRWIPP GKGSLYIRPLLMG+GAVLGLAPAPEYTFLI+VSPVGNYFKEG+APINL+VE E HRATPGGTGGVKTIGNY             GYSDVLYLDC+HKRYLEEVSSCNIF+VK NVISTP IKGTILPGITRKSII+VA+SQGF+            +ADEVFCTGT
Sbjct:  188 NKRWIPPPGKGSLYIRPLLMGTGAVLGLAPAPEYTFLIFVSPVGNYFKEGVAPINLIVETEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCLHKRYLEEVSSCNIFIVKDNVISTPEIKGTILPGITRKSIIEVARSQGFKVEERNVTVDELVEADEVFCTGT 361          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT2_ARATH (Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 2.432e-60
Identity = 110/174 (63.22%), Postives = 127/174 (72.99%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXXDADEVFCTGT 523
            NKRW+PP+GKG+LYIRPLLMGSG +LGL PAPEYTF++Y SPVGNYFKEG+A +NL VE E  RA PGG GGVK+I NY             G+SDVLYLD V K+YLEE SSCN+FVVKG  ISTP   GTIL GITRKS++++A  QG+Q            DADEVFCTGT
Sbjct:  162 NKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVRAAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTISTPATNGTILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGT 335          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT6_ARATH (Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 2.696e-51
Identity = 97/174 (55.75%), Postives = 123/174 (70.69%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXXDADEVFCTGT 523
            NK+W+PP GKG+LYIRPLL+GSGA LG+APAPEYTFLIY SPVG+Y K   + +NL V+H+ HRA  GGTGGVK+  NY             G+SDVL+LD    R +EE+++CNIF+VKGN++STP   GTILPG+TRKSI ++A   G+Q            +A+EVFCTGT
Sbjct:  127 NKKWVPPPGKGTLYIRPLLLGSGATLGVAPAPEYTFLIYASPVGDYHKVS-SGLNLKVDHKYHRAHSGGTGGVKSCTNYSPVVKSLLEAKSAGFSDVLFLDAATGRNIEELTACNIFIVKGNIVSTPPTSGTILPGVTRKSISELAHDIGYQVEERDVSVDELLEAEEVFCTGT 299          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT7_ARATH (Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 7.341e-49
Identity = 95/174 (54.60%), Postives = 121/174 (69.54%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXXDADEVFCTGT 523
            N +W+PP GKG+LYIRPLL+G+GAVLG+A APEYTFLIY SPVGNY K   + +NL V+H   RA  GGTGGVK+  NY             G+SDVL+LD    + +EEVS+CNIF++KGN++STP   GTILPGITRKSI ++A+  G++            +A+EVFCTGT
Sbjct:  130 NNKWVPPPGKGALYIRPLLIGTGAVLGVASAPEYTFLIYTSPVGNYHKAS-SGLNLKVDHNHRRAHFGGTGGVKSCTNYSPVVKSLIEAKSSGFSDVLFLDAATGKNIEEVSTCNIFILKGNIVSTPPTSGTILPGITRKSICELARDIGYEVQERDLSVDELLEAEEVFCTGT 302          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT1_ARATH (Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 1.252e-48
Identity = 98/174 (56.32%), Postives = 117/174 (67.24%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXXDADEVFCTGT 523
            N+RW+PP GKGSLY+RPLL GSGA LG+A A EYTFL++ SPV NYFKEG A +NL VE  + RA  GGTGGVK I NY             G+SDVLYLD    + +EEVS+ NIF+VKGN I TP   GTIL GITRKSII++A   G++            +A+EVFCTGT
Sbjct:  158 NRRWVPPPGKGSLYLRPLLFGSGASLGVAAASEYTFLVFGSPVQNYFKEGTAALNLYVEEVIPRAYLGGTGGVKAISNYGPVLEVMRRAKSRGFSDVLYLDADTGKNIEEVSAANIFLVKGNTIVTPATSGTILGGITRKSIIEIALDLGYKVEERSVPVEELKEAEEVFCTGT 331          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: BCAT4_ARATH (Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 6.019e-43
Identity = 82/174 (47.13%), Postives = 111/174 (63.79%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXXDADEVFCTGT 523
            NK+WIPP GKG+LYIRP+L GSG +LG  P PE TF  +  PVG Y K+  + +NL +E +  RA P GTGGVK+I NY             G+SD+L+LD    + +EE+ + N+F++KGNV+STP I GTILPG+TR  ++++ +  G+Q            DADE FCTGT
Sbjct:  126 NKKWIPPPGKGTLYIRPILFGSGPILGSFPIPETTFTAFACPVGRYHKDN-SGLNLKIEDQFRRAFPSGTGGVKSITNYCPVWIPLAEAKKQGFSDILFLDAATGKNIEELFAANVFMLKGNVVSTPTIAGTILPGVTRNCVMELCRDFGYQVEERTIPLVDFLDADEAFCTGT 298          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: ILVE2_BACSU (Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis GN=ilvK PE=1 SV=5)

HSP 1 Score: 135.191 bits (339), Expect = 1.817e-31
Identity = 75/180 (41.67%), Postives = 99/180 (55.00%), Query Frame = 2
Query:    2 NKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXXDA------DEVFCTGT 523
            +K WIP +   SLYIRP ++ +   LG+A +  Y  LI +SPVG+Y+KEGI P+ + VE E  RA  GGTG  KT GNY             G+S VL+LD + K+Y+EEV S NIF      I TP++ G+IL GITR S+I + +  G Q             A      +E F TGT
Sbjct:  124 DKDWIPNAEGTSLYIRPFIIATEPFLGVAASHTYKLLIILSPVGSYYKEGIKPVKIAVESEFVRAVKGGTGNAKTAGNYASSLKAQQVAEEKGFSQVLWLDGIEKKYIEEVGSMNIFFKINGEIVTPMLNGSILEGITRNSVIALLKHWGLQVSERKIAIDEVIQAHKDGILEEAFGTGT 303          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: ILVE_STRCO (Probable branched-chain-amino-acid aminotransferase OS=Streptomyces coelicolor GN=ilvE PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 5.469e-28
Identity = 58/153 (37.91%), Postives = 91/153 (59.48%), Query Frame = 2
Query:    2 NKRWIPP-SGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQ 457
            +++W+P   G+ SLY+RP ++ +   LG+ PA EY F++  SP G YF  G+ P+++ V  +  RA PGG G  KT GNY             G   V YLD + ++++EE+   N++ V GN I TP + G+IL G+TR S++ VA+  G++
Sbjct:  128 DEKWVPAHGGEESLYLRPFMIATEVGLGVRPANEYLFIVIASPAGAYFPGGVKPVSIWVSEDRVRAVPGGMGDAKTGGNYAASLLAQAEAAAKGCDQVCYLDAIERKWVEELGGMNLYFVYGNKIVTPSLTGSILEGVTRDSLLTVARDLGYE 280          
BLAST of CX286803 vs. ExPASy Swiss-Prot
Match: ILVE_STAAR (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MRSA252) GN=ilvE PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 7.143e-28
Identity = 64/152 (42.11%), Postives = 89/152 (58.55%), Query Frame = 2
Query:    5 KRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFK-EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQ 457
            + W+P     SLYIRP +  +  VLG+  + +Y  LI +SP G Y+  E + P  + VE E  RA  GG G  K  GNY             GY  VL+LD V ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII++A++ G++
Sbjct:  123 REWVPEGEGQSLYIRPFVFATEGVLGVGASHQYKLLIILSPSGAYYGGETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYE 274          
The following BLAST results are available for this feature:
BLAST of CX286803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
BCAT3_ARATH2.506e-7375.29Branched-chain-amino-acid aminotransferase 3, chlo... [more]
BCAT5_ARATH3.272e-7377.01Branched-chain-amino-acid aminotransferase 5, chlo... [more]
BCAT2_ARATH2.432e-6063.22Branched-chain-amino-acid aminotransferase 2, chlo... [more]
BCAT6_ARATH2.696e-5155.75Branched-chain-amino-acid aminotransferase 6 OS=Ar... [more]
BCAT7_ARATH7.341e-4954.60Putative branched-chain-amino-acid aminotransferas... [more]
BCAT1_ARATH1.252e-4856.32Branched-chain-amino-acid aminotransferase 1, mito... [more]
BCAT4_ARATH6.019e-4347.13Probable branched-chain-amino-acid aminotransferas... [more]
ILVE2_BACSU1.817e-3141.67Branched-chain-amino-acid aminotransferase 2 OS=Ba... [more]
ILVE_STRCO5.469e-2837.91Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAR7.143e-2842.11Probable branched-chain-amino-acid aminotransferas... [more]

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Properties
Property NameValue
Genbank descriptionC01001B12Rv Veg1 Citrus clementina cDNA clone C01001B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286803 ID=CX286803; Name=CX286803; organism=Citrus clementina; type=EST; length=523bp
AAACAAACGTTGGATCCCTCCTTCTGGTAAAGGTTCCTTATATATCAGGC
CATTGCTAATGGGAAGTGGAGCTGTTCTTGGTCTTGCACCTGCTCCTGAA
TATACATTTCTGATTTATGTTTCACCTGTTGGGAACTACTTTAAGGAAGG
CATTGCACCCATAAATTTGGTTGTTGAGCATGAATTACATCGTGCAACTC
CTGGGGGAACTGGAGGCGTAAAGACTATAGGAAACTATGCTGCGGTTCTT
AAGGCTCAATCTGCTGCGAAGGCCAAAGGTTATTCTGATGTTCTTTACCT
TGATTGTGTTCACAAGAGATACCTGGAAGAGGTTTCCTCTTGCAACATTT
TTGTCGTGAAGGGCAATGTTATATCCACTCCTGTGATAAAAGGAACTATC
TTACCTGGCATTACAAGAAAGAGTATAATTGATGTTGCTCAAAGCCAAGG
GTTCCAGGTTGAGGAACGCCTTGTGACAGTGGAGGAGTTACTTGATGCTG
ATGAAGTTTTTTGTACTGGTACA
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