CX286815

Overview
NameCX286815
Unique NameCX286815
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length556
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11919 contig Ccv1_Contig11919:604..1159. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX286815 vs. ExPASy Swiss-Prot
Match: DFRA_MAIZE (Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 8.954e-27
Identity = 74/182 (40.66%), Postives = 109/182 (59.89%), Query Frame = 3
Query:    6 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHY----WLGAVHVKDVAKAQVLLFETSAASGRYLCTN 527
            GVFH+A+P      KDPE E++ P V+G ++++ A K+ G VRR+V TSS  ++  N    Q  V DE SWTD+DFC+  K+  W Y +SKTLAEKAA  +A ++G D+V I P   +GPF    +  S      L+ G+     HY     +  +H+ D+  A++ LFE  AA+GRY+C++
Sbjct:   85 GVFHVATPMDFLS-KDPENEVIKPTVEGMISIMRACKEAGTVRRIVFTSSAGTV--NLEERQRPVYDEESWTDVDFCRRVKMTGWMYFVSKTLAEKAALAYAAEHGLDLVTIIPTLVVGPFISASMPPSLITALALITGN---APHYSILKQVQLIHLDDLCDAEIFLFENPAAAGRYVCSS 260          
BLAST of CX286815 vs. ExPASy Swiss-Prot
Match: DFRA_ARATH (Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 8.954e-27
Identity = 74/183 (40.44%), Postives = 104/183 (56.83%), Query Frame = 3
Query:    6 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF-----PQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTN 527
            GVFH+A+P   +  KDPE E++ P V G L +++A  K   VRR V TSS  ++  N    Q  V DE  W+DL+F  S K+  W Y +SKTLAEKAAW+FAE+ G D ++I P   +GPF     P   + A   + +     S   Q  Y    VH+ D+  A + L+E +AA GRY+C++
Sbjct:   80 GVFHVATPMDFES-KDPENEVIKPTVNGMLGIMKACVKAKTVRRFVFTSSAGTV--NVEEHQKNVYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEAHYSIIRQGQY----VHLDDLCNAHIFLYEQAAAKGRYICSS 255          
BLAST of CX286815 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.881e-25
Identity = 69/182 (37.91%), Postives = 109/182 (59.89%), Query Frame = 3
Query:    6 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL----GAVHVKDVAKAQVLLFETSAASGRYLCTN 527
            GVFH+A+P   +  KDPE E++ P + G L++L+A +K   VR++V TSS  ++  N    Q  V DE++W+D++FC+S K+  W Y +SKTLAE+AAW++A++N  D + I P   +GPF  P +  S   L   L      + HY +      VH+ D+  + + L+E   A GRY+C++
Sbjct:   80 GVFHVATPMDFES-KDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTV--NVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPS---LITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIYLYEHPKAEGRYICSS 255          
BLAST of CX286815 vs. ExPASy Swiss-Prot
Match: DFRA_HORVU (Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.913e-25
Identity = 69/182 (37.91%), Postives = 106/182 (58.24%), Query Frame = 3
Query:    6 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHY----WLGAVHVKDVAKAQVLLFETSAASGRYLCTN 527
            GVFH+A+P   D  +DPE E++ P V+G L+++ A K+ G V+R+V TSS  S+  N         D+ +W+D+D+C+  K+  W Y +SK LAEKAA E+A +NG D ++I P   +GPF    +  S      L+ G+   + HY     +  VH+ D+  A   LFE   A+GRY+C++
Sbjct:   80 GVFHVATPMDFDS-QDPENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSV--NIEERPRPAYDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYASENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGN---EAHYSILKQVQLVHLDDLCDAMTFLFEHPEANGRYICSS 255          
BLAST of CX286815 vs. ExPASy Swiss-Prot
Match: DFRA_DIACA (Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.417e-25
Identity = 72/191 (37.70%), Postives = 108/191 (56.54%), Query Frame = 3
Query:    6 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL----GAVHVKDVAKAQVLLFETSAASGRYL---CTNGIYQFAE 548
            GVFH+A+P   +  KDPE E++ P + G L++L++  K  +RRVV TSS  ++  N    Q  V DET W+ LDF +S K+  W Y +SK LAE+AAW++A +N  + ++I P   +GPF  P +  S   L   L     T+ HY +      VH+ D+  + + L+E   A+GRY+   C   IY  A+
Sbjct:   97 GVFHIATPMDFES-KDPENEMIKPTINGMLDILKSCVKAKLRRVVFTSSGGTV--NVEATQKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAENNLEFISIIPPLVVGPFIMPSMPPS---LITALSPITRTESHYTIIKQGQFVHLDDLCMSHIFLYENPKANGRYIASACAATIYDIAK 281          
BLAST of CX286815 vs. ExPASy Swiss-Prot
Match: DFRA_VITVI (Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.867e-24
Identity = 67/182 (36.81%), Postives = 107/182 (58.79%), Query Frame = 3
Query:    6 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL----GAVHVKDVAKAQVLLFETSAASGRYLCTN 527
            GVFH+A+P   +  KDPE E++ P ++G L ++++ A    VRR+V TSS  ++  N    Q  V DE+ W+D++FC++ K+  W Y +SKTLAE+AAW++A++N  D + I P   +GPF    +++    L   L      + HY +      VH+ D+  A + LFE   A GRY+C++
Sbjct:   80 GVFHVATPMDFES-KDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTV--NIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPF---IMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENPKAEGRYICSS 255          
BLAST of CX286815 vs. ExPASy Swiss-Prot
Match: DFRA_PYRCO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.867e-24
Identity = 67/182 (36.81%), Postives = 109/182 (59.89%), Query Frame = 3
Query:    6 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL----GAVHVKDVAKAQVLLFETSAASGRYLCTN 527
            GVFH+A+P   +  +DPE E++ P + G L++L+A +K   VR++V TSS  ++  N    Q  V DE++W+D++FC+S K+  W Y +SKTLAE+AAW++A++N  D + I P   +GPF  P +  S   L   L      + HY +      VH+ D+  + + L++   A GRY+C++
Sbjct:   80 GVFHVATPMDFES-RDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTV--NVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPS---LITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIYLYKHPKAEGRYICSS 255          
BLAST of CX286815 vs. ExPASy Swiss-Prot
Match: DFRA_CALCH (Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.160e-24
Identity = 70/181 (38.67%), Postives = 105/181 (58.01%), Query Frame = 3
Query:    6 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL----GAVHVKDVAKAQVLLFETSAASGRYLCT 524
            GVFH+A+P   +  KDPE E++ P ++G L+++ + AK   V+++V TSS  ++  N    Q  V DE+ W+DLDF  S K+  W Y +SKTLAEKAA E A++N  D V+I P   +GPF  P    S      L+ G+   + HY +      VH+ D+ +  + L+E   A GRY+C+
Sbjct:   81 GVFHVATPMDFES-KDPENEIIKPTIEGILSIIRSCAKAKTVKKLVYTSSAGTV--NVQETQLPVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAMEAAKENNIDFVSIIPPLVVGPFINPTFPPSLITALSLINGA---ESHYSIIKQGQYVHLDDLCECHIFLYENPEAKGRYICS 255          
BLAST of CX286815 vs. ExPASy Swiss-Prot
Match: BAN_ARATH (Leucoanthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 7.844e-23
Identity = 68/183 (37.16%), Postives = 109/183 (59.56%), Query Frame = 3
Query:    9 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAA-KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIW---YSMSKTLAEKAAWEFAEKNGTDVVAIHPA----TSLGPFPQPYVNASGAVL---QRLLQGSKDTQE-HYWLGAVHVKDVAKAQVLLFETSAASGRYLC 521
            +FH+A+P      +DPEK+++ PA+QG +NVL++  K   V+RV+ TSS +++  N     G V++E +WTD++F    K +   Y +SK LAEK AWEFA++N  ++V + PA     SL   P   ++ S + +   +  + G K+ Q+    +  VHV D+A+A + L E   ASGRY+C
Sbjct:   85 IFHVATPINFKS-EDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSISFVHVDDLARAHLFLAEKETASGRYIC 266          
BLAST of CX286815 vs. ExPASy Swiss-Prot
Match: DFRA_PETHY (Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.338e-22
Identity = 69/183 (37.70%), Postives = 106/183 (57.92%), Query Frame = 3
Query:    3 KGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL----GAVHVKDVAKAQVLLFETSAASGRYLCTN 527
            +GVFH+A+P   +  KDPE E++ P V+G L+++E+ AK   V+R+V TSS  ++  +    Q    D+TSW+DLDF  + K+  W Y  SK LAEKAA E A+K   D ++I P   +GPF  P    S      L+ G+   + HY +      VH+ D+ +A + L+E   A GR++C++
Sbjct:   89 QGVFHVATPMDFES-KDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTL--DVQEQQKLFYDQTSWSDLDFIYAKKMTGWMYFASKILAEKAAMEEAKKKNIDFISIIPPLVVGPFITPTFPPSLITALSLITGN---EAHYCIIKQGQYVHLDDLCEAHIFLYEHPKADGRFICSS 265          
The following BLAST results are available for this feature:
BLAST of CX286815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
DFRA_MAIZE8.954e-2740.66Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3... [more]
DFRA_ARATH8.954e-2740.44Dihydroflavonol-4-reductase OS=Arabidopsis thalian... [more]
DFRA_MALDO2.881e-2537.91Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_HORVU4.913e-2537.91Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=... [more]
DFRA_DIACA6.417e-2537.70Dihydroflavonol-4-reductase OS=Dianthus caryophyll... [more]
DFRA_VITVI1.867e-2436.81Dihydroflavonol-4-reductase OS=Vitis vinifera GN=D... [more]
DFRA_PYRCO1.867e-2436.81Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_CALCH4.160e-2438.67Dihydroflavonol-4-reductase OS=Callistephus chinen... [more]
BAN_ARATH7.844e-2337.16Leucoanthocyanidin reductase OS=Arabidopsis thalia... [more]
DFRA_PETHY1.338e-2237.70Dihydroflavonol-4-reductase OS=Petunia hybrida GN=... [more]

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Properties
Property NameValue
Genbank descriptionC01001D02Rv Veg1 Citrus clementina cDNA clone C01001D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286815 ID=CX286815; Name=CX286815; organism=Citrus clementina; type=EST; length=556bp
GCAAGGGGGTCTTCCATCTTGCCTCTCCTAACACCCTGGATGATCCCAAG
GACCCCGAAAAGGAGCTGCTCATTCCTGCTGTTCAAGGCACCCTCAATGT
CTTAGAGGCTGCCAAGAAGTTTGGTGTCAGGCGTGTGGTGCTCACCAGCT
CCATTTCTTCCATTGTGCCTAATCCCAATTGGCCTCAAGGCAAGGTCATT
GATGAAACTTCTTGGACCGACCTTGACTTTTGCAAGTCTCACAAGATATG
GTATTCAATGTCAAAGACACTAGCAGAAAAAGCAGCATGGGAATTTGCAG
AGAAGAATGGAACGGATGTGGTGGCAATCCATCCAGCCACATCTCTTGGG
CCATTTCCGCAGCCTTACGTGAACGCGAGCGGAGCTGTGCTGCAGCGTTT
GTTGCAGGGTTCAAAAGACACTCAAGAGCATTACTGGCTGGGAGCTGTGC
ATGTTAAAGATGTGGCTAAGGCTCAAGTGTTGCTTTTTGAAACTTCTGCT
GCTTCTGGTAGATACCTCTGTACCAACGGAATTTATCAGTTTGCTGAATT
TGCTGA
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