CX286821

Overview
NameCX286821
Unique NameCX286821
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length600
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286821 vs. ExPASy Swiss-Prot
Match: SRPK1_PONAB (Serine/threonine-protein kinase SRPK1 OS=Pongo abelii GN=SRPK1 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.636e-27
Identity = 49/95 (51.58%), Postives = 78/95 (82.11%), Query Frame = 2
Query:    2 KDEDHLALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSA 286
            +DEDH+AL++ELLG +PRK+ + G+YS++FF + GDL+HI +L+ W + +VLVEKY++++ +A    DFL+P+L+ +PEKR TAA+CL HPW+++
Sbjct:  561 RDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 655          
BLAST of CX286821 vs. ExPASy Swiss-Prot
Match: SRPK1_HUMAN (Serine/threonine-protein kinase SRPK1 OS=Homo sapiens GN=SRPK1 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.636e-27
Identity = 49/95 (51.58%), Postives = 78/95 (82.11%), Query Frame = 2
Query:    2 KDEDHLALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSA 286
            +DEDH+AL++ELLG +PRK+ + G+YS++FF + GDL+HI +L+ W + +VLVEKY++++ +A    DFL+P+L+ +PEKR TAA+CL HPW+++
Sbjct:  561 RDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 655          
BLAST of CX286821 vs. ExPASy Swiss-Prot
Match: SRPK2_MOUSE (Serine/threonine-protein kinase SRPK2 OS=Mus musculus GN=Srpk2 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 4.760e-27
Identity = 52/95 (54.74%), Postives = 72/95 (75.79%), Query Frame = 2
Query:    2 KDEDHLALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSA 286
            +DEDH+A ++ELLG +PR  AL G+YSR+FFNR G+LRHI +L+ W +  VLVEKY +   DA    DFL+P+L+ VPEKR +A +CL HPW+++
Sbjct:  587 RDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLNS 681          
BLAST of CX286821 vs. ExPASy Swiss-Prot
Match: SRPK1_MOUSE (Serine/threonine-protein kinase SRPK1 OS=Mus musculus GN=Srpk1 PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 6.217e-27
Identity = 49/95 (51.58%), Postives = 77/95 (81.05%), Query Frame = 2
Query:    2 KDEDHLALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSA 286
            +DEDH+AL++ELLG +PRK+ + G+YS++FF + GDL+HI +L+ W + +VLVEKY++ + +A    DFL+P+L+ +PEKR TAA+CL HPW+++
Sbjct:  554 RDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLLEVLVEKYEWPQEEAAGFTDFLLPMLELMPEKRATAAECLRHPWLNS 648          
BLAST of CX286821 vs. ExPASy Swiss-Prot
Match: SRPK3_HUMAN (Serine/threonine-protein kinase SRPK3 OS=Homo sapiens GN=SRPK3 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.819e-25
Identity = 48/94 (51.06%), Postives = 71/94 (75.53%), Query Frame = 2
Query:    2 KDEDHLALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMS 283
            +DEDH+A ++ELLG +P   AL GRYSR+FFNR G+LRHI  L+ W + +VL+EKY++    A   + FL+P+++++PEKR +AA CL HPW++
Sbjct:  439 RDEDHIAHIVELLGDIPPAFALSGRYSREFFNRRGELRHIHNLKHWGLYEVLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLN 532          
BLAST of CX286821 vs. ExPASy Swiss-Prot
Match: SRPK3_MOUSE (Serine/threonine-protein kinase SRPK3 OS=Mus musculus GN=Srpk3 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 9.926e-25
Identity = 48/94 (51.06%), Postives = 71/94 (75.53%), Query Frame = 2
Query:    2 KDEDHLALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMS 283
            +DEDH+A ++ELLG +P   AL GRYSR+FFNR G+LRHI  L+ W + +VL+EKY++    A   + FL+P+++++PEKR +AA CL HPW++
Sbjct:  471 RDEDHIAHIVELLGDIPPAFALSGRYSREFFNRRGELRHIPNLKHWGLYEVLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLN 564          
BLAST of CX286821 vs. ExPASy Swiss-Prot
Match: SRPK2_HUMAN (Serine/threonine-protein kinase SRPK2 OS=Homo sapiens GN=SRPK2 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 9.926e-25
Identity = 50/95 (52.63%), Postives = 69/95 (72.63%), Query Frame = 2
Query:    2 KDEDHLALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSA 286
            +DEDH+A ++ELLG +PR  AL G+YSR+FFNR G+LRHI +L+ W +  VLVEKY +   DA    DFL+P+L+ VPEKR +A     HPW+++
Sbjct:  594 RDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGCLCRHPWLNS 688          
BLAST of CX286821 vs. ExPASy Swiss-Prot
Match: SKY1_YEAST (Serine/threonine-protein kinase SKY1 OS=Saccharomyces cerevisiae GN=SKY1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.752e-21
Identity = 44/93 (47.31%), Postives = 66/93 (70.97%), Query Frame = 2
Query:    2 KDEDHLALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWM 280
            KD+DH+A ++ELLG +P  +   G+Y+R FFN  G LR+I +L+FWP+  VL EKY F++ +AK+++DFL P+L   P KR  A   ++HPW+
Sbjct:  614 KDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 706          
BLAST of CX286821 vs. ExPASy Swiss-Prot
Match: SKY1_DICDI (Probable serine/threonine-protein kinase sky1 OS=Dictyostelium discoideum GN=sky1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.695e-21
Identity = 51/98 (52.04%), Postives = 65/98 (66.33%), Query Frame = 2
Query:    2 KDEDHLALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRF-WPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSAGP 292
            K +DHLALM+ELLG  PR I  GG  SR +F   GDLR I  L   WP+  VL EKY F+ ++AKD   FL+P+L+++PEKR TA  CL+H W+   P
Sbjct:  555 KSDDHLALMIELLGKPPRFIFAGGDESRVYFTHKGDLRKIPDLSDQWPLFSVLTEKYKFSIQEAKDFEAFLLPMLNYLPEKRATAKDCLNHTWLKDVP 652          
BLAST of CX286821 vs. ExPASy Swiss-Prot
Match: DSK1_SCHPO (Protein kinase dsk1 OS=Schizosaccharomyces pombe GN=dsk1 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.304e-20
Identity = 49/111 (44.14%), Postives = 74/111 (66.67%), Query Frame = 2
Query:    2 KDEDHLALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMS--AGPQLR-EPSMAAGE 325
            K++DH+A ++ELL   P+++AL G++SRD FNR G+LR+I +L+FWP+  VL +KY F+   A+ ++DFL P+L F P KR  A    + PW+   A P  + E + A GE
Sbjct:  424 KEDDHIAQIIELLVNYPKQMALSGKHSRDLFNRRGELRNIHKLKFWPLKDVLEQKYHFSAELAQQISDFLSPMLCFDPAKRTNAGYMSNSPWLREVADPTFKIETTGATGE 534          
The following BLAST results are available for this feature:
BLAST of CX286821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
SRPK1_PONAB1.636e-2751.58Serine/threonine-protein kinase SRPK1 OS=Pongo abe... [more]
SRPK1_HUMAN1.636e-2751.58Serine/threonine-protein kinase SRPK1 OS=Homo sapi... [more]
SRPK2_MOUSE4.760e-2754.74Serine/threonine-protein kinase SRPK2 OS=Mus muscu... [more]
SRPK1_MOUSE6.217e-2751.58Serine/threonine-protein kinase SRPK1 OS=Mus muscu... [more]
SRPK3_HUMAN5.819e-2551.06Serine/threonine-protein kinase SRPK3 OS=Homo sapi... [more]
SRPK3_MOUSE9.926e-2551.06Serine/threonine-protein kinase SRPK3 OS=Mus muscu... [more]
SRPK2_HUMAN9.926e-2552.63Serine/threonine-protein kinase SRPK2 OS=Homo sapi... [more]
SKY1_YEAST1.752e-2147.31Serine/threonine-protein kinase SKY1 OS=Saccharomy... [more]
SKY1_DICDI8.695e-2152.04Probable serine/threonine-protein kinase sky1 OS=D... [more]
DSK1_SCHPO3.304e-2044.14Protein kinase dsk1 OS=Schizosaccharomyces pombe G... [more]

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Properties
Property NameValue
Genbank descriptionC01001D08Rv Veg1 Citrus clementina cDNA clone C01001D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286821 ID=CX286821; Name=CX286821; organism=Citrus clementina; type=EST; length=600bp
TAAGGATGAGGATCACTTGGCACTGATGATGGAGCTTCTCGGGATGATGC
CACGCAAGATTGCATTGGGTGGTCGCTATTCCCGTGATTTCTTCAACAGA
CATGGGGATTTGAGGCACATCCGTCGTCTACGTTTTTGGCCTATGAATAA
GGTCCTTGTAGAGAAGTACGACTTTAACGAGCGAGATGCAAAGGACATGG
CTGACTTCCTTGTTCCAATACTTGATTTCGTTCCTGAAAAGAGACCAACT
GCAGCCCAATGTCTCAGTCATCCATGGATGAGTGCAGGACCTCAACTGCG
TGAGCCTTCTATGGCTGCTGGTGAGCCACGGGAGACAGAAGGTAGTATAC
CTGAAAGAAAGAGGAGGGAGCAGGAGGAGAGGGAGGCTATGGAAGTGGGA
GTGGGGAATATGGCCATTAATGGGGCTTCAAAGTTATCAAGCGACCAGGA
AGCTGCTGCATTAAAGCTTCCCAAGTAGACATTCAGGTTGTGTTTCTCAC
AAGTTCCTCCAGTTGTCTTTATATTCTTCTCACATGATCTTTTGCCAAAA
TGTTGCTTGCAATATTTTTGCAAAATGCGAAGACTCATGTAATGCCATGG
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